RNA–Protein interactions for RNA: ENST00000577857.5

ACADVL-208, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 4

Gene ACADVL, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-208ENST00000577857 NISCHQ9Y2I1 1504 aa55.76■■■■■ 6.52
ACADVL-208ENST00000577857 CCDC180Q9P1Z9 1646 aa49.66■■■■■ 5.54
ACADVL-208ENST00000577857 ABCC9O60706 1549 aa48.93■■■■■ 5.42
ACADVL-208ENST00000577857 RB1CC1Q8TDY2 1594 aa46.91■■■■■ 5.1
ACADVL-208ENST00000577857 NACADO15069 1562 aa46.8■■■■■ 5.08
ACADVL-208ENST00000577857 DCAF8L2P0C7V8 631 aa46.72■■■■■ 5.07
ACADVL-208ENST00000577857 MYO15BQ96JP2 1530 aa46.44■■■■■ 5.02
ACADVL-208ENST00000577857 ZCCHC6Q5VYS8 1495 aaKnown RBP46.39■■■■■ 5.02
ACADVL-208ENST00000577857 DCAF1Q9Y4B6 1507 aa46.12■■■■■ 4.97
ACADVL-208ENST00000577857 UNC13AQ9UPW8 1703 aa45.74■■■■■ 4.91
ACADVL-208ENST00000577857 PABPN1Q86U42 306 aaKnown RBP eCLIP45.68■■■■■ 4.91e-8■■■■■ 33.4
ACADVL-208ENST00000577857 BICRAQ9NZM4 1560 aa45.49■■■■■ 4.87
ACADVL-208ENST00000577857 SCRIBQ14160 1630 aa45.32■■■■■ 4.85
ACADVL-208ENST00000577857 DNAJC5BQ9UF47 199 aa45.16■■■■■ 4.82
ACADVL-208ENST00000577857 SHROOM4Q9ULL8 1493 aa45.04■■■■■ 4.8
ACADVL-208ENST00000577857 EIF4G1Q04637 1599 aaKnown RBP44.34■■■■■ 4.69
ACADVL-208ENST00000577857 CC2D2AQ9P2K1 1620 aa44.21■■■■■ 4.67
ACADVL-208ENST00000577857 CECR2Q9BXF3 1484 aa44.01■■■■■ 4.64
ACADVL-208ENST00000577857 SMARCA4P51532 1647 aa43.31■■■■■ 4.52
ACADVL-208ENST00000577857 BAZ1AQ9NRL2 1556 aaPredicted RBP43.24■■■■■ 4.51
ACADVL-208ENST00000577857 NCAPD3P42695 1498 aa43.2■■■■■ 4.51
ACADVL-208ENST00000577857 ATAD2BQ9ULI0 1458 aa43.19■■■■■ 4.5
ACADVL-208ENST00000577857 SMARCA2P51531 1590 aa43.11■■■■■ 4.49
ACADVL-208ENST00000577857 MROH2BQ7Z745 1585 aa42.96■■■■■ 4.47
ACADVL-208ENST00000577857 HMGXB3Q12766 1538 aa42.95■■■■■ 4.47
ACADVL-208ENST00000577857 PEG3Q9GZU2 1588 aa42.9■■■■■ 4.46
ACADVL-208ENST00000577857 BAZ1BQ9UIG0 1483 aaKnown RBP42.81■■■■■ 4.44
ACADVL-208ENST00000577857 WIZO95785 1651 aa42.44■■■■■ 4.39
ACADVL-208ENST00000577857 RSF1Q96T23 1441 aaPredicted RBP42.38■■■■■ 4.38
ACADVL-208ENST00000577857 NESP48681 1621 aa42.24■■■■■ 4.35
ACADVL-208ENST00000577857 ERCC6Q03468 1493 aa42.22■■■■■ 4.35
ACADVL-208ENST00000577857 LAMC3Q9Y6N6 1575 aa42.09■■■■■ 4.33
ACADVL-208ENST00000577857 TOP2AP11388 1531 aaKnown RBP42.02■■■■■ 4.32
ACADVL-208ENST00000577857 CADPSQ9ULU8 1353 aa41.94■■■■■ 4.3
ACADVL-208ENST00000577857 PDS5BQ9NTI5 1447 aa41.86■■■■■ 4.29
ACADVL-208ENST00000577857 CUX2O14529 1486 aa41.85■■■■■ 4.29
ACADVL-208ENST00000577857 KIF21AQ7Z4S6 1674 aa41.67■■■■■ 4.26
ACADVL-208ENST00000577857 THOC2Q8NI27 1593 aaKnown RBP41.65■■■■■ 4.26
ACADVL-208ENST00000577857 CFTRP13569 1480 aa41.62■■■■■ 4.25
ACADVL-208ENST00000577857 CCDC88BA6NC98 1476 aa41.53■■■■■ 4.24
ACADVL-208ENST00000577857 FANCD2Q9BXW9 1451 aa41.45■■■■■ 4.23
ACADVL-208ENST00000577857 MRC2Q9UBG0 1479 aa41.43■■■■■ 4.22
ACADVL-208ENST00000577857 CEP164Q9UPV0 1460 aa41.43■■■■■ 4.22
ACADVL-208ENST00000577857 WDR62O43379 1518 aa41.3■■■■■ 4.2
ACADVL-208ENST00000577857 PRDM2Q13029 1718 aa41.17■■■■■ 4.18
ACADVL-208ENST00000577857 SUPT5HO00267 1087 aaKnown RBP41.09■■■■■ 4.17
ACADVL-208ENST00000577857 URB2Q14146 1524 aaKnown RBP41.04■■■■■ 4.16
ACADVL-208ENST00000577857 DNAJC5Q9H3Z4 198 aa40.92■■■■■ 4.14
ACADVL-208ENST00000577857 TOPBP1Q92547 1522 aa40.75■■■■■ 4.11
ACADVL-208ENST00000577857 ABCC8Q09428 1581 aa40.73■■■■■ 4.11
ACADVL-208ENST00000577857 DNMBPQ6XZF7 1577 aa40.67■■■■■ 4.1
ACADVL-208ENST00000577857 IFT140Q96RY7 1462 aa40.58■■■■■ 4.09
ACADVL-208ENST00000577857 ZNF608Q9ULD9 1512 aaPredicted RBP40.42■■■■■ 4.06
ACADVL-208ENST00000577857 POLA1P09884 1462 aaPredicted RBP40.39■■■■■ 4.06
ACADVL-208ENST00000577857 CUX1P39880 1505 aa40.33■■■■■ 4.05
ACADVL-208ENST00000577857 TARBP1Q13395 1621 aaKnown RBP40.29■■■■■ 4.04
ACADVL-208ENST00000577857 FGD5Q6ZNL6 1462 aa40.25■■■■■ 4.03
ACADVL-208ENST00000577857 EIF4G3O43432 1585 aaKnown RBP40.23■■■■■ 4.03
ACADVL-208ENST00000577857 SOGA1O94964 1423 aa40.22■■■■■ 4.03
ACADVL-208ENST00000577857 RAD54L2Q9Y4B4 1467 aa40.21■■■■■ 4.03
ACADVL-208ENST00000577857 AQRO60306 1485 aaKnown RBP eCLIP40.14■■■■■ 4.023e-8■■■■□ 24.7
ACADVL-208ENST00000577857 OSCARQ8IYS5 282 aa40.08■■■■■ 4.01
ACADVL-208ENST00000577857 TDRD9Q8NDG6 1382 aaKnown RBP40.04■■■■■ 4
ACADVL-208ENST00000577857 WRNQ14191 1432 aaPredicted RBP eCLIP39.99■■■■□ 3.99
ACADVL-208ENST00000577857 WDR97A6NE52 1622 aa39.98■■■■□ 3.99
ACADVL-208ENST00000577857 TOP2BQ02880 1626 aa39.88■■■■□ 3.97
ACADVL-208ENST00000577857 SYNJ1O43426 1573 aa39.86■■■■□ 3.97
ACADVL-208ENST00000577857 BIVM-ERCC5R4GMW8 1640 aa39.86■■■■□ 3.97
ACADVL-208ENST00000577857 ABCA10Q8WWZ4 1543 aa39.85■■■■□ 3.97
ACADVL-208ENST00000577857 GRIN2BQ13224 1484 aa39.8■■■■□ 3.96
ACADVL-208ENST00000577857 SNAPC4Q5SXM2 1469 aa39.78■■■■□ 3.96
ACADVL-208ENST00000577857 GAPVD1Q14C86 1478 aa39.75■■■■□ 3.95
ACADVL-208ENST00000577857 FBLN2P98095 1184 aa39.74■■■■□ 3.95
ACADVL-208ENST00000577857 MAGI1Q96QZ7 1491 aaPredicted RBP39.72■■■■□ 3.95
ACADVL-208ENST00000577857 CHD1O14646 1710 aa39.71■■■■□ 3.95
ACADVL-208ENST00000577857 ABCA5Q8WWZ7 1642 aa39.69■■■■□ 3.94
ACADVL-208ENST00000577857 PBRM1Q86U86 1689 aa39.6■■■■□ 3.93
ACADVL-208ENST00000577857 CHMP7Q8WUX9 453 aaPredicted RBP39.59■■■■□ 3.93
ACADVL-208ENST00000577857 SYNJ2O15056 1496 aa39.57■■■■□ 3.93
ACADVL-208ENST00000577857 TRIM41Q8WV44 630 aa39.47■■■■□ 3.91
ACADVL-208ENST00000577857 ARHGEF11O15085 1522 aa39.42■■■■□ 3.9
ACADVL-208ENST00000577857 RIMBP3CA6NJZ7 1639 aa39.42■■■■□ 3.9
ACADVL-208ENST00000577857 RIMBP3BA6NNM3 1639 aa39.42■■■■□ 3.9
ACADVL-208ENST00000577857 RIMBP3Q9UFD9 1639 aa39.42■■■■□ 3.9
ACADVL-208ENST00000577857 ERICH3Q5RHP9 1530 aa39.35■■■■□ 3.89
ACADVL-208ENST00000577857 ADAMTS12P58397 1594 aa39.35■■■■□ 3.89
ACADVL-208ENST00000577857 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
ACADVL-208ENST00000577857 FHAD1B1AJZ9 1412 aa39.29■■■■□ 3.88
ACADVL-208ENST00000577857 GRIN2AQ12879 1464 aa39.27■■■■□ 3.88
ACADVL-208ENST00000577857 KIF27Q86VH2 1401 aa39.18■■■■□ 3.86
ACADVL-208ENST00000577857 NUP160Q12769 1436 aa39.12■■■■□ 3.85
ACADVL-208ENST00000577857 CYB5RLQ6IPT4 315 aa39.09■■■■□ 3.85
ACADVL-208ENST00000577857 ARAP1Q96P48 1450 aa39.09■■■■□ 3.85
ACADVL-208ENST00000577857 CEP170Q5SW79 1584 aa39.07■■■■□ 3.84
ACADVL-208ENST00000577857 IGF1RP08069 1367 aa39.04■■■■□ 3.84
ACADVL-208ENST00000577857 CUL7Q14999 1698 aa38.92■■■■□ 3.82
ACADVL-208ENST00000577857 SHROOM2Q13796 1616 aa38.81■■■■□ 3.8
ACADVL-208ENST00000577857 CARMIL1Q5VZK9 1371 aa38.8■■■■□ 3.8
ACADVL-208ENST00000577857 RUSC2Q8N2Y8 1516 aa38.78■■■■□ 3.8
ACADVL-208ENST00000577857 ERCC6L2Q5T890 1561 aa38.77■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms