RNA–Protein interactions for RNA: ENST00000418561.2

TTC17-203, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-203ENST00000418561 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
TTC17-203ENST00000418561 CHIC1Q5VXU3 224 aa15.13■□□□□ 0.01
TTC17-203ENST00000418561 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
TTC17-203ENST00000418561 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
TTC17-203ENST00000418561 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.31
TTC17-203ENST00000418561 FOXD1Q16676 465 aa12.95□□□□□ -0.34
TTC17-203ENST00000418561 POTEDQ86YR6 584 aa12.63□□□□□ -0.39
TTC17-203ENST00000418561 MSH5O43196 834 aa12.32□□□□□ -0.44
TTC17-203ENST00000418561 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
TTC17-203ENST00000418561 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
TTC17-203ENST00000418561 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
TTC17-203ENST00000418561 ABCC9O60706 1549 aa11.76□□□□□ -0.53
TTC17-203ENST00000418561 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
TTC17-203ENST00000418561 ADRA2BP18089 450 aa11.73□□□□□ -0.53
TTC17-203ENST00000418561 RB1CC1Q8TDY2 1594 aa11.29□□□□□ -0.6
TTC17-203ENST00000418561 NACADO15069 1562 aa11.24□□□□□ -0.61
TTC17-203ENST00000418561 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
TTC17-203ENST00000418561 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
TTC17-203ENST00000418561 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
TTC17-203ENST00000418561 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
TTC17-203ENST00000418561 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
TTC17-203ENST00000418561 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
TTC17-203ENST00000418561 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
TTC17-203ENST00000418561 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
TTC17-203ENST00000418561 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
TTC17-203ENST00000418561 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
TTC17-203ENST00000418561 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.68
TTC17-203ENST00000418561 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.69
TTC17-203ENST00000418561 CECR2Q9BXF3 1484 aa10.69□□□□□ -0.7
TTC17-203ENST00000418561 UNC13AQ9UPW8 1703 aa10.68□□□□□ -0.7
TTC17-203ENST00000418561 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
TTC17-203ENST00000418561 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
TTC17-203ENST00000418561 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
TTC17-203ENST00000418561 DCAF8L1A6NGE4 600 aa10.47□□□□□ -0.73
TTC17-203ENST00000418561 RNF39Q9H2S5 420 aa10.45□□□□□ -0.74
TTC17-203ENST00000418561 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
TTC17-203ENST00000418561 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
TTC17-203ENST00000418561 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
TTC17-203ENST00000418561 CUX2O14529 1486 aa10.36□□□□□ -0.75
TTC17-203ENST00000418561 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
TTC17-203ENST00000418561 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
TTC17-203ENST00000418561 ERCC6Q03468 1493 aa10.29□□□□□ -0.76
TTC17-203ENST00000418561 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
TTC17-203ENST00000418561 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
TTC17-203ENST00000418561 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
TTC17-203ENST00000418561 RNF216Q9NWF9 866 aaPredicted RBP10.22□□□□□ -0.77
TTC17-203ENST00000418561 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
TTC17-203ENST00000418561 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
TTC17-203ENST00000418561 BAZ1BQ9UIG0 1483 aaKnown RBP10.18□□□□□ -0.78
TTC17-203ENST00000418561 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
TTC17-203ENST00000418561 PEG3Q9GZU2 1588 aa10.15□□□□□ -0.78
TTC17-203ENST00000418561 SMARCA4P51532 1647 aa10.15□□□□□ -0.79
TTC17-203ENST00000418561 LAMC3Q9Y6N6 1575 aa10.12□□□□□ -0.79
TTC17-203ENST00000418561 CADPSQ9ULU8 1353 aa10.08□□□□□ -0.8
TTC17-203ENST00000418561 NESP48681 1621 aa10.01□□□□□ -0.81
TTC17-203ENST00000418561 MRC2Q9UBG0 1479 aa9.98□□□□□ -0.81
TTC17-203ENST00000418561 MROH2BQ7Z745 1585 aa9.97□□□□□ -0.81
TTC17-203ENST00000418561 THOC2Q8NI27 1593 aaKnown RBP9.95□□□□□ -0.82
TTC17-203ENST00000418561 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
TTC17-203ENST00000418561 CEP164Q9UPV0 1460 aa9.92□□□□□ -0.82
TTC17-203ENST00000418561 WDR62O43379 1518 aa9.91□□□□□ -0.82
TTC17-203ENST00000418561 CFTRP13569 1480 aa9.91□□□□□ -0.82
TTC17-203ENST00000418561 FANCD2Q9BXW9 1451 aa9.88□□□□□ -0.83
TTC17-203ENST00000418561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.88□□□□□ -0.836e-6■■■□□ 19.2
TTC17-203ENST00000418561 RSF1Q96T23 1441 aaPredicted RBP9.84□□□□□ -0.83
TTC17-203ENST00000418561 ABCC8Q09428 1581 aa9.84□□□□□ -0.83
TTC17-203ENST00000418561 POTEHQ6S545 545 aa9.83□□□□□ -0.84
TTC17-203ENST00000418561 TRIM41Q8WV44 630 aa9.82□□□□□ -0.84
TTC17-203ENST00000418561 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
TTC17-203ENST00000418561 TOP2AP11388 1531 aaKnown RBP9.81□□□□□ -0.84
TTC17-203ENST00000418561 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
TTC17-203ENST00000418561 IFT140Q96RY7 1462 aa9.78□□□□□ -0.84
TTC17-203ENST00000418561 WIZO95785 1651 aa9.77□□□□□ -0.85
TTC17-203ENST00000418561 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.86
TTC17-203ENST00000418561 CCDC88BA6NC98 1476 aa9.67□□□□□ -0.86
TTC17-203ENST00000418561 DSG3P32926 999 aa9.65□□□□□ -0.86
TTC17-203ENST00000418561 TOPBP1Q92547 1522 aa9.65□□□□□ -0.86
TTC17-203ENST00000418561 NPM3O75607 178 aaKnown RBP9.63□□□□□ -0.87
TTC17-203ENST00000418561 U3KPZ7 1027 aaPredicted RBP9.63□□□□□ -0.87
TTC17-203ENST00000418561 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
TTC17-203ENST00000418561 WDR97A6NE52 1622 aa9.61□□□□□ -0.87
TTC17-203ENST00000418561 CAPN15O75808 1086 aa9.6□□□□□ -0.87
TTC17-203ENST00000418561 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
TTC17-203ENST00000418561 SOGA1O94964 1423 aa9.58□□□□□ -0.88
TTC17-203ENST00000418561 ARHGEF11O15085 1522 aa9.58□□□□□ -0.88
TTC17-203ENST00000418561 ZNF608Q9ULD9 1512 aaPredicted RBP9.58□□□□□ -0.88
TTC17-203ENST00000418561 FBLN2P98095 1184 aa9.58□□□□□ -0.88
TTC17-203ENST00000418561 CYB5RLQ6IPT4 315 aa9.58□□□□□ -0.88
TTC17-203ENST00000418561 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
TTC17-203ENST00000418561 PRDM2Q13029 1718 aa9.58□□□□□ -0.88
TTC17-203ENST00000418561 AQRO60306 1485 aaKnown RBP eCLIP9.54□□□□□ -0.883e-7■■■■□ 23.1
TTC17-203ENST00000418561 POLA1P09884 1462 aaPredicted RBP9.54□□□□□ -0.88
TTC17-203ENST00000418561 MAGI1Q96QZ7 1491 aaPredicted RBP9.54□□□□□ -0.88
TTC17-203ENST00000418561 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
TTC17-203ENST00000418561 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
TTC17-203ENST00000418561 RIMBP3BA6NNM3 1639 aa9.53□□□□□ -0.88
TTC17-203ENST00000418561 RIMBP3Q9UFD9 1639 aa9.53□□□□□ -0.88
TTC17-203ENST00000418561 EIF4G3O43432 1585 aaKnown RBP9.52□□□□□ -0.89
TTC17-203ENST00000418561 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
TTC17-203ENST00000418561 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms