RNA–Protein interactions for RNA: ENST00000467074.6

C2CD2-204, Transcript of C2 calcium dependent domain containing 2, humanhuman

TSL 5

Gene C2CD2, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-204ENST00000467074 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
C2CD2-204ENST00000467074 ABCC9O60706 1549 aa22.42■■□□□ 1.18
C2CD2-204ENST00000467074 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
C2CD2-204ENST00000467074 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
C2CD2-204ENST00000467074 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
C2CD2-204ENST00000467074 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
C2CD2-204ENST00000467074 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.96
C2CD2-204ENST00000467074 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
C2CD2-204ENST00000467074 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
C2CD2-204ENST00000467074 NACADO15069 1562 aa20.79■□□□□ 0.92
C2CD2-204ENST00000467074 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
C2CD2-204ENST00000467074 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
C2CD2-204ENST00000467074 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
C2CD2-204ENST00000467074 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
C2CD2-204ENST00000467074 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
C2CD2-204ENST00000467074 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
C2CD2-204ENST00000467074 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
C2CD2-204ENST00000467074 CECR2Q9BXF3 1484 aa20.32■□□□□ 0.84
C2CD2-204ENST00000467074 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
C2CD2-204ENST00000467074 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
C2CD2-204ENST00000467074 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
C2CD2-204ENST00000467074 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
C2CD2-204ENST00000467074 CUX2O14529 1486 aa19.75■□□□□ 0.75
C2CD2-204ENST00000467074 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
C2CD2-204ENST00000467074 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.74
C2CD2-204ENST00000467074 WIZO95785 1651 aa19.6■□□□□ 0.73
C2CD2-204ENST00000467074 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
C2CD2-204ENST00000467074 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
C2CD2-204ENST00000467074 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
C2CD2-204ENST00000467074 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
C2CD2-204ENST00000467074 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
C2CD2-204ENST00000467074 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
C2CD2-204ENST00000467074 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
C2CD2-204ENST00000467074 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
C2CD2-204ENST00000467074 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
C2CD2-204ENST00000467074 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
C2CD2-204ENST00000467074 LOC105371045A0A1W2PR82 267 aa19.04■□□□□ 0.64
C2CD2-204ENST00000467074 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
C2CD2-204ENST00000467074 NESP48681 1621 aa19.03■□□□□ 0.64
C2CD2-204ENST00000467074 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
C2CD2-204ENST00000467074 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
C2CD2-204ENST00000467074 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
C2CD2-204ENST00000467074 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
C2CD2-204ENST00000467074 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
C2CD2-204ENST00000467074 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
C2CD2-204ENST00000467074 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
C2CD2-204ENST00000467074 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
C2CD2-204ENST00000467074 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
C2CD2-204ENST00000467074 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
C2CD2-204ENST00000467074 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
C2CD2-204ENST00000467074 WDR62O43379 1518 aa18.64■□□□□ 0.57
C2CD2-204ENST00000467074 EEA1Q15075 1411 aa18.61■□□□□ 0.57
C2CD2-204ENST00000467074 SOGA1O94964 1423 aa18.6■□□□□ 0.57
C2CD2-204ENST00000467074 CFTRP13569 1480 aa18.58■□□□□ 0.56
C2CD2-204ENST00000467074 PRDM2Q13029 1718 aa18.58■□□□□ 0.56
C2CD2-204ENST00000467074 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
C2CD2-204ENST00000467074 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
C2CD2-204ENST00000467074 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
C2CD2-204ENST00000467074 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
C2CD2-204ENST00000467074 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
C2CD2-204ENST00000467074 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
C2CD2-204ENST00000467074 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
C2CD2-204ENST00000467074 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
C2CD2-204ENST00000467074 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
C2CD2-204ENST00000467074 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
C2CD2-204ENST00000467074 CUX1P39880 1505 aa18.43■□□□□ 0.54
C2CD2-204ENST00000467074 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
C2CD2-204ENST00000467074 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
C2CD2-204ENST00000467074 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
C2CD2-204ENST00000467074 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
C2CD2-204ENST00000467074 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
C2CD2-204ENST00000467074 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
C2CD2-204ENST00000467074 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
C2CD2-204ENST00000467074 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
C2CD2-204ENST00000467074 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
C2CD2-204ENST00000467074 KIF21BO75037 1637 aa18.29■□□□□ 0.52
C2CD2-204ENST00000467074 HRCP23327 699 aa18.28■□□□□ 0.52
C2CD2-204ENST00000467074 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
C2CD2-204ENST00000467074 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
C2CD2-204ENST00000467074 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
C2CD2-204ENST00000467074 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
C2CD2-204ENST00000467074 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
C2CD2-204ENST00000467074 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
C2CD2-204ENST00000467074 PRXQ9BXM0 1461 aa18.15■□□□□ 0.5
C2CD2-204ENST00000467074 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
C2CD2-204ENST00000467074 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
C2CD2-204ENST00000467074 CLIP1P30622 1438 aa18.12■□□□□ 0.49
C2CD2-204ENST00000467074 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
C2CD2-204ENST00000467074 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
C2CD2-204ENST00000467074 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
C2CD2-204ENST00000467074 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
C2CD2-204ENST00000467074 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
C2CD2-204ENST00000467074 IGF1RP08069 1367 aa18.02■□□□□ 0.48
C2CD2-204ENST00000467074 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
C2CD2-204ENST00000467074 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
C2CD2-204ENST00000467074 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
C2CD2-204ENST00000467074 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
C2CD2-204ENST00000467074 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
C2CD2-204ENST00000467074 CHD1O14646 1710 aa17.95■□□□□ 0.46
C2CD2-204ENST00000467074 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms