RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 NISCHQ9Y2I1 1504 aa15.39■□□□□ 0.05
CRNKL1-207ENST00000536226 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
CRNKL1-207ENST00000536226 MYT1Q01538 1121 aa14.53□□□□□ -0.08
CRNKL1-207ENST00000536226 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
CRNKL1-207ENST00000536226 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.25
CRNKL1-207ENST00000536226 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
CRNKL1-207ENST00000536226 ZCCHC6Q5VYS8 1495 aaKnown RBP13.04□□□□□ -0.32
CRNKL1-207ENST00000536226 HRCP23327 699 aa12.92□□□□□ -0.34
CRNKL1-207ENST00000536226 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
CRNKL1-207ENST00000536226 CENPBP07199 599 aaPredicted RBP12.89□□□□□ -0.35
CRNKL1-207ENST00000536226 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
CRNKL1-207ENST00000536226 PRKCSHP14314 528 aaPredicted RBP12.8□□□□□ -0.36
CRNKL1-207ENST00000536226 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
CRNKL1-207ENST00000536226 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.4
CRNKL1-207ENST00000536226 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.4
CRNKL1-207ENST00000536226 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
CRNKL1-207ENST00000536226 APLP2Q06481 763 aa12.43□□□□□ -0.42
CRNKL1-207ENST00000536226 PPARGC1BQ86YN6 1023 aaKnown RBP12.43□□□□□ -0.42
CRNKL1-207ENST00000536226 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
CRNKL1-207ENST00000536226 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-207ENST00000536226 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
CRNKL1-207ENST00000536226 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
CRNKL1-207ENST00000536226 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
CRNKL1-207ENST00000536226 NACADO15069 1562 aa12.32□□□□□ -0.44
CRNKL1-207ENST00000536226 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
CRNKL1-207ENST00000536226 ACIN1Q9UKV3 1341 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-207ENST00000536226 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
CRNKL1-207ENST00000536226 ABCC9O60706 1549 aa12.29□□□□□ -0.44
CRNKL1-207ENST00000536226 SCRIBQ14160 1630 aa12.25□□□□□ -0.45
CRNKL1-207ENST00000536226 ANP32EQ9BTT0 268 aa12.22□□□□□ -0.45
CRNKL1-207ENST00000536226 RB1CC1Q8TDY2 1594 aa12.11□□□□□ -0.47
CRNKL1-207ENST00000536226 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
CRNKL1-207ENST00000536226 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
CRNKL1-207ENST00000536226 RANGAP1P46060 587 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-207ENST00000536226 NEUROD1Q13562 356 aa12□□□□□ -0.49
CRNKL1-207ENST00000536226 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
CRNKL1-207ENST00000536226 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
CRNKL1-207ENST00000536226 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
CRNKL1-207ENST00000536226 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
CRNKL1-207ENST00000536226 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
CRNKL1-207ENST00000536226 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
CRNKL1-207ENST00000536226 EIF4G1Q04637 1599 aaKnown RBP11.93□□□□□ -0.5
CRNKL1-207ENST00000536226 YTHDC1Q96MU7 727 aaKnown RBP11.91□□□□□ -0.5
CRNKL1-207ENST00000536226 WIZO95785 1651 aa11.91□□□□□ -0.5
CRNKL1-207ENST00000536226 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
CRNKL1-207ENST00000536226 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
CRNKL1-207ENST00000536226 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
CRNKL1-207ENST00000536226 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
CRNKL1-207ENST00000536226 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
CRNKL1-207ENST00000536226 NEFLP07196 543 aa11.82□□□□□ -0.52
CRNKL1-207ENST00000536226 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
CRNKL1-207ENST00000536226 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
CRNKL1-207ENST00000536226 PKNOX2Q96KN3 472 aa11.77□□□□□ -0.53
CRNKL1-207ENST00000536226 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
CRNKL1-207ENST00000536226 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
CRNKL1-207ENST00000536226 UBE2Q2Q8WVN8 375 aa11.75□□□□□ -0.53
CRNKL1-207ENST00000536226 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
CRNKL1-207ENST00000536226 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
CRNKL1-207ENST00000536226 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
CRNKL1-207ENST00000536226 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
CRNKL1-207ENST00000536226 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
CRNKL1-207ENST00000536226 CHIC1Q5VXU3 224 aa11.64□□□□□ -0.55
CRNKL1-207ENST00000536226 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
CRNKL1-207ENST00000536226 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
CRNKL1-207ENST00000536226 CCDC88BA6NC98 1476 aa11.54□□□□□ -0.56
CRNKL1-207ENST00000536226 DEKP35659 375 aaKnown RBP11.52□□□□□ -0.57
CRNKL1-207ENST00000536226 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-207ENST00000536226 ATAD2BQ9ULI0 1458 aa11.5□□□□□ -0.57
CRNKL1-207ENST00000536226 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-207ENST00000536226 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
CRNKL1-207ENST00000536226 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
CRNKL1-207ENST00000536226 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
CRNKL1-207ENST00000536226 PDE4CQ08493 712 aa11.44□□□□□ -0.58
CRNKL1-207ENST00000536226 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
CRNKL1-207ENST00000536226 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
CRNKL1-207ENST00000536226 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
CRNKL1-207ENST00000536226 A0A0U1RQG5 324 aaPredicted RBP11.39□□□□□ -0.59
CRNKL1-207ENST00000536226 BCANQ96GW7 911 aa11.38□□□□□ -0.59
CRNKL1-207ENST00000536226 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
CRNKL1-207ENST00000536226 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
CRNKL1-207ENST00000536226 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
CRNKL1-207ENST00000536226 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
CRNKL1-207ENST00000536226 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
CRNKL1-207ENST00000536226 ZNF316A6NFI3 1004 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-207ENST00000536226 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
CRNKL1-207ENST00000536226 NBR1Q14596 966 aa11.32□□□□□ -0.6
CRNKL1-207ENST00000536226 BAZ1BQ9UIG0 1483 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-207ENST00000536226 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
CRNKL1-207ENST00000536226 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
CRNKL1-207ENST00000536226 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
CRNKL1-207ENST00000536226 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
CRNKL1-207ENST00000536226 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-207ENST00000536226 ARXQ96QS3 562 aa11.24□□□□□ -0.61
CRNKL1-207ENST00000536226 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
CRNKL1-207ENST00000536226 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
CRNKL1-207ENST00000536226 CFTRP13569 1480 aa11.19□□□□□ -0.62
CRNKL1-207ENST00000536226 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
CRNKL1-207ENST00000536226 FKBP8Q14318 412 aa11.18□□□□□ -0.62
CRNKL1-207ENST00000536226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
CRNKL1-207ENST00000536226 ANP32AP39687 249 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms