RNA–Protein interactions for RNA: ENST00000581562.5

ACADVL-226, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-226ENST00000581562 NISCHQ9Y2I1 1504 aa56.4■■■■■ 6.62
ACADVL-226ENST00000581562 CCDC180Q9P1Z9 1646 aa50.29■■■■■ 5.64
ACADVL-226ENST00000581562 ABCC9O60706 1549 aa49.85■■■■■ 5.57
ACADVL-226ENST00000581562 RB1CC1Q8TDY2 1594 aa47.67■■■■■ 5.22
ACADVL-226ENST00000581562 DCAF8L2P0C7V8 631 aa47.57■■■■■ 5.21
ACADVL-226ENST00000581562 NACADO15069 1562 aa47.47■■■■■ 5.19
ACADVL-226ENST00000581562 MYO15BQ96JP2 1530 aa46.98■■■■■ 5.11
ACADVL-226ENST00000581562 ZCCHC6Q5VYS8 1495 aaKnown RBP46.85■■■■■ 5.09
ACADVL-226ENST00000581562 DCAF1Q9Y4B6 1507 aa46.59■■■■■ 5.05
ACADVL-226ENST00000581562 PABPN1Q86U42 306 aaKnown RBP eCLIP46.55■■■■■ 5.041e-8■■■■■ 33.4
ACADVL-226ENST00000581562 UNC13AQ9UPW8 1703 aa46.42■■■■■ 5.02
ACADVL-226ENST00000581562 DNAJC5BQ9UF47 199 aa46.19■■■■■ 4.98
ACADVL-226ENST00000581562 BICRAQ9NZM4 1560 aa46.17■■■■■ 4.98
ACADVL-226ENST00000581562 SCRIBQ14160 1630 aa45.94■■■■■ 4.94
ACADVL-226ENST00000581562 SHROOM4Q9ULL8 1493 aa45.68■■■■■ 4.9
ACADVL-226ENST00000581562 EIF4G1Q04637 1599 aaKnown RBP45.04■■■■■ 4.8
ACADVL-226ENST00000581562 CC2D2AQ9P2K1 1620 aa44.99■■■■■ 4.79
ACADVL-226ENST00000581562 CECR2Q9BXF3 1484 aa44.85■■■■■ 4.77
ACADVL-226ENST00000581562 SMARCA4P51532 1647 aa43.84■■■■■ 4.61
ACADVL-226ENST00000581562 NCAPD3P42695 1498 aa43.83■■■■■ 4.61
ACADVL-226ENST00000581562 ATAD2BQ9ULI0 1458 aa43.78■■■■■ 4.6
ACADVL-226ENST00000581562 BAZ1AQ9NRL2 1556 aaPredicted RBP43.76■■■■■ 4.6
ACADVL-226ENST00000581562 SMARCA2P51531 1590 aa43.71■■■■■ 4.59
ACADVL-226ENST00000581562 HMGXB3Q12766 1538 aa43.53■■■■■ 4.56
ACADVL-226ENST00000581562 MROH2BQ7Z745 1585 aa43.46■■■■■ 4.55
ACADVL-226ENST00000581562 BAZ1BQ9UIG0 1483 aaKnown RBP43.43■■■■■ 4.54
ACADVL-226ENST00000581562 PEG3Q9GZU2 1588 aa43.38■■■■■ 4.54
ACADVL-226ENST00000581562 ERCC6Q03468 1493 aa43.06■■■■■ 4.48
ACADVL-226ENST00000581562 NESP48681 1621 aa42.94■■■■■ 4.46
ACADVL-226ENST00000581562 WIZO95785 1651 aa42.94■■■■■ 4.46
ACADVL-226ENST00000581562 RSF1Q96T23 1441 aaPredicted RBP42.8■■■■■ 4.44
ACADVL-226ENST00000581562 LAMC3Q9Y6N6 1575 aa42.73■■■■■ 4.43
ACADVL-226ENST00000581562 CUX2O14529 1486 aa42.7■■■■■ 4.43
ACADVL-226ENST00000581562 CADPSQ9ULU8 1353 aa42.57■■■■■ 4.41
ACADVL-226ENST00000581562 PDS5BQ9NTI5 1447 aa42.55■■■■■ 4.4
ACADVL-226ENST00000581562 TOP2AP11388 1531 aaKnown RBP42.48■■■■■ 4.39
ACADVL-226ENST00000581562 KIF21AQ7Z4S6 1674 aa42.34■■■■■ 4.37
ACADVL-226ENST00000581562 THOC2Q8NI27 1593 aaKnown RBP42.33■■■■■ 4.37
ACADVL-226ENST00000581562 CFTRP13569 1480 aa42.17■■■■■ 4.34
ACADVL-226ENST00000581562 MRC2Q9UBG0 1479 aa42.11■■■■■ 4.33
ACADVL-226ENST00000581562 FANCD2Q9BXW9 1451 aa42.08■■■■■ 4.33
ACADVL-226ENST00000581562 CEP164Q9UPV0 1460 aa42.08■■■■■ 4.33
ACADVL-226ENST00000581562 DNAJC5Q9H3Z4 198 aa42.04■■■■■ 4.32
ACADVL-226ENST00000581562 CCDC88BA6NC98 1476 aa42.02■■■■■ 4.32
ACADVL-226ENST00000581562 WDR62O43379 1518 aa41.93■■■■■ 4.3
ACADVL-226ENST00000581562 PRDM2Q13029 1718 aa41.66■■■■■ 4.26
ACADVL-226ENST00000581562 URB2Q14146 1524 aaKnown RBP41.64■■■■■ 4.26
ACADVL-226ENST00000581562 SUPT5HO00267 1087 aaKnown RBP41.5■■■■■ 4.23
ACADVL-226ENST00000581562 TOPBP1Q92547 1522 aa41.32■■■■■ 4.2
ACADVL-226ENST00000581562 ABCC8Q09428 1581 aa41.31■■■■■ 4.2
ACADVL-226ENST00000581562 IFT140Q96RY7 1462 aa41.21■■■■■ 4.19
ACADVL-226ENST00000581562 DNMBPQ6XZF7 1577 aa41.2■■■■■ 4.19
ACADVL-226ENST00000581562 ZNF608Q9ULD9 1512 aaPredicted RBP41.04■■■■■ 4.16
ACADVL-226ENST00000581562 OSCARQ8IYS5 282 aa40.94■■■■■ 4.14
ACADVL-226ENST00000581562 POLA1P09884 1462 aaPredicted RBP40.93■■■■■ 4.14
ACADVL-226ENST00000581562 TARBP1Q13395 1621 aaKnown RBP40.84■■■■■ 4.13
ACADVL-226ENST00000581562 SOGA1O94964 1423 aa40.82■■■■■ 4.12
ACADVL-226ENST00000581562 EIF4G3O43432 1585 aaKnown RBP40.82■■■■■ 4.12
ACADVL-226ENST00000581562 CUX1P39880 1505 aa40.8■■■■■ 4.12
ACADVL-226ENST00000581562 RAD54L2Q9Y4B4 1467 aa40.8■■■■■ 4.12
ACADVL-226ENST00000581562 AQRO60306 1485 aaKnown RBP eCLIP40.79■■■■■ 4.123e-8■■■■□ 24.7
ACADVL-226ENST00000581562 FGD5Q6ZNL6 1462 aa40.77■■■■■ 4.12
ACADVL-226ENST00000581562 TDRD9Q8NDG6 1382 aaKnown RBP40.66■■■■■ 4.1
ACADVL-226ENST00000581562 FBLN2P98095 1184 aa40.54■■■■■ 4.08
ACADVL-226ENST00000581562 TRIM41Q8WV44 630 aa40.54■■■■■ 4.08
ACADVL-226ENST00000581562 WDR97A6NE52 1622 aa40.5■■■■■ 4.07
ACADVL-226ENST00000581562 WRNQ14191 1432 aaPredicted RBP eCLIP40.42■■■■■ 4.06
ACADVL-226ENST00000581562 SNAPC4Q5SXM2 1469 aa40.39■■■■■ 4.06
ACADVL-226ENST00000581562 GRIN2BQ13224 1484 aa40.39■■■■■ 4.06
ACADVL-226ENST00000581562 CHD1O14646 1710 aa40.37■■■■■ 4.05
ACADVL-226ENST00000581562 ABCA10Q8WWZ4 1543 aa40.34■■■■■ 4.05
ACADVL-226ENST00000581562 GAPVD1Q14C86 1478 aa40.32■■■■■ 4.04
ACADVL-226ENST00000581562 CHMP7Q8WUX9 453 aaPredicted RBP40.31■■■■■ 4.04
ACADVL-226ENST00000581562 MAGI1Q96QZ7 1491 aaPredicted RBP40.3■■■■■ 4.04
ACADVL-226ENST00000581562 TOP2BQ02880 1626 aa40.3■■■■■ 4.04
ACADVL-226ENST00000581562 BIVM-ERCC5R4GMW8 1640 aa40.26■■■■■ 4.04
ACADVL-226ENST00000581562 SYNJ1O43426 1573 aa40.26■■■■■ 4.04
ACADVL-226ENST00000581562 RIMBP3CA6NJZ7 1639 aa40.21■■■■■ 4.03
ACADVL-226ENST00000581562 RIMBP3BA6NNM3 1639 aa40.21■■■■■ 4.03
ACADVL-226ENST00000581562 RIMBP3Q9UFD9 1639 aa40.21■■■■■ 4.03
ACADVL-226ENST00000581562 ARHGEF11O15085 1522 aa40.18■■■■■ 4.02
ACADVL-226ENST00000581562 ABCA5Q8WWZ7 1642 aa40.16■■■■■ 4.02
ACADVL-226ENST00000581562 SYNJ2O15056 1496 aa40.16■■■■■ 4.02
ACADVL-226ENST00000581562 PBRM1Q86U86 1689 aa40.15■■■■■ 4.02
ACADVL-226ENST00000581562 CYB5RLQ6IPT4 315 aa39.96■■■■□ 3.99
ACADVL-226ENST00000581562 CLASP1Q7Z460 1538 aa39.95■■■■□ 3.99
ACADVL-226ENST00000581562 ADAMTS12P58397 1594 aa39.84■■■■□ 3.97
ACADVL-226ENST00000581562 ERICH3Q5RHP9 1530 aa39.84■■■■□ 3.97
ACADVL-226ENST00000581562 FHAD1B1AJZ9 1412 aa39.83■■■■□ 3.97
ACADVL-226ENST00000581562 GRIN2AQ12879 1464 aa39.83■■■■□ 3.97
ACADVL-226ENST00000581562 ARAP1Q96P48 1450 aa39.81■■■■□ 3.96
ACADVL-226ENST00000581562 NUP160Q12769 1436 aa39.65■■■■□ 3.94
ACADVL-226ENST00000581562 KIF27Q86VH2 1401 aa39.63■■■■□ 3.93
ACADVL-226ENST00000581562 CEP170Q5SW79 1584 aa39.62■■■■□ 3.93
ACADVL-226ENST00000581562 IGF1RP08069 1367 aa39.51■■■■□ 3.92
ACADVL-226ENST00000581562 TRHP20396 242 aaPredicted RBP39.39■■■■□ 3.9
ACADVL-226ENST00000581562 ERCC6L2Q5T890 1561 aa39.37■■■■□ 3.89
ACADVL-226ENST00000581562 CUL7Q14999 1698 aa39.35■■■■□ 3.89
ACADVL-226ENST00000581562 JPH4Q96JJ6 628 aa39.35■■■■□ 3.89
ACADVL-226ENST00000581562 SHROOM2Q13796 1616 aa39.35■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms