RNA–Protein interactions for RNA: ENST00000528714.1

LRP5-202, Transcript of LDL receptor related protein 5, humanhuman

TSL 3

Gene LRP5, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-202ENST00000528714 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
LRP5-202ENST00000528714 ABCC9O60706 1549 aa35.1■■■■□ 3.21
LRP5-202ENST00000528714 CCDC180Q9P1Z9 1646 aa35.02■■■■□ 3.2
LRP5-202ENST00000528714 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
LRP5-202ENST00000528714 DNAJC5BQ9UF47 199 aa33.06■■■□□ 2.88
LRP5-202ENST00000528714 NACADO15069 1562 aa33.04■■■□□ 2.88
LRP5-202ENST00000528714 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
LRP5-202ENST00000528714 DCAF8L2P0C7V8 631 aa32.67■■■□□ 2.82
LRP5-202ENST00000528714 PABPN1Q86U42 306 aaKnown RBP eCLIP32.6■■■□□ 2.81
LRP5-202ENST00000528714 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
LRP5-202ENST00000528714 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
LRP5-202ENST00000528714 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
LRP5-202ENST00000528714 DCAF1Q9Y4B6 1507 aa32.15■■■□□ 2.74
LRP5-202ENST00000528714 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
LRP5-202ENST00000528714 SHROOM4Q9ULL8 1493 aa31.89■■■□□ 2.7
LRP5-202ENST00000528714 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
LRP5-202ENST00000528714 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.65
LRP5-202ENST00000528714 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
LRP5-202ENST00000528714 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
LRP5-202ENST00000528714 ATAD2BQ9ULI0 1458 aa30.46■■■□□ 2.47
LRP5-202ENST00000528714 SMARCA4P51532 1647 aa30.45■■■□□ 2.47
LRP5-202ENST00000528714 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
LRP5-202ENST00000528714 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
LRP5-202ENST00000528714 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
LRP5-202ENST00000528714 CUX2O14529 1486 aa30.22■■■□□ 2.43
LRP5-202ENST00000528714 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
LRP5-202ENST00000528714 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
LRP5-202ENST00000528714 NESP48681 1621 aa30.19■■■□□ 2.42
LRP5-202ENST00000528714 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
LRP5-202ENST00000528714 BAZ1BQ9UIG0 1483 aaKnown RBP30.11■■■□□ 2.41
LRP5-202ENST00000528714 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
LRP5-202ENST00000528714 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
LRP5-202ENST00000528714 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
LRP5-202ENST00000528714 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
LRP5-202ENST00000528714 WIZO95785 1651 aa29.72■■■□□ 2.35
LRP5-202ENST00000528714 PDS5BQ9NTI5 1447 aa29.58■■■□□ 2.33
LRP5-202ENST00000528714 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
LRP5-202ENST00000528714 MRC2Q9UBG0 1479 aa29.45■■■□□ 2.31
LRP5-202ENST00000528714 WDR62O43379 1518 aa29.45■■■□□ 2.3
LRP5-202ENST00000528714 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
LRP5-202ENST00000528714 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
LRP5-202ENST00000528714 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
LRP5-202ENST00000528714 FANCD2Q9BXW9 1451 aa29.27■■■□□ 2.28
LRP5-202ENST00000528714 CFTRP13569 1480 aa29.26■■■□□ 2.27
LRP5-202ENST00000528714 URB2Q14146 1524 aaKnown RBP29.13■■■□□ 2.25
LRP5-202ENST00000528714 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
LRP5-202ENST00000528714 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
LRP5-202ENST00000528714 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
LRP5-202ENST00000528714 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
LRP5-202ENST00000528714 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
LRP5-202ENST00000528714 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
LRP5-202ENST00000528714 OSCARQ8IYS5 282 aa28.67■■■□□ 2.18
LRP5-202ENST00000528714 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
LRP5-202ENST00000528714 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
LRP5-202ENST00000528714 RIMBP3CA6NJZ7 1639 aa28.57■■■□□ 2.16
LRP5-202ENST00000528714 RIMBP3BA6NNM3 1639 aa28.57■■■□□ 2.16
LRP5-202ENST00000528714 RIMBP3Q9UFD9 1639 aa28.57■■■□□ 2.16
LRP5-202ENST00000528714 TARBP1Q13395 1621 aaKnown RBP28.56■■■□□ 2.16
LRP5-202ENST00000528714 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
LRP5-202ENST00000528714 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
LRP5-202ENST00000528714 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
LRP5-202ENST00000528714 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.141e-10■■■■■ 51.2
LRP5-202ENST00000528714 CHD1O14646 1710 aa28.43■■■□□ 2.14
LRP5-202ENST00000528714 RAD54L2Q9Y4B4 1467 aa28.36■■■□□ 2.13
LRP5-202ENST00000528714 CUX1P39880 1505 aa28.27■■■□□ 2.12
LRP5-202ENST00000528714 FGD5Q6ZNL6 1462 aa28.25■■■□□ 2.11
LRP5-202ENST00000528714 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
LRP5-202ENST00000528714 SOGA1O94964 1423 aa28.2■■■□□ 2.11
LRP5-202ENST00000528714 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
LRP5-202ENST00000528714 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
LRP5-202ENST00000528714 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
LRP5-202ENST00000528714 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
LRP5-202ENST00000528714 FBLN2P98095 1184 aa28.09■■■□□ 2.09
LRP5-202ENST00000528714 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
LRP5-202ENST00000528714 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
LRP5-202ENST00000528714 PBRM1Q86U86 1689 aa28.01■■■□□ 2.07
LRP5-202ENST00000528714 GRIN2BQ13224 1484 aa28■■■□□ 2.07
LRP5-202ENST00000528714 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
LRP5-202ENST00000528714 SYNJ1O43426 1573 aa27.95■■■□□ 2.07
LRP5-202ENST00000528714 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
LRP5-202ENST00000528714 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
LRP5-202ENST00000528714 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.06
LRP5-202ENST00000528714 CHMP7Q8WUX9 453 aaPredicted RBP27.85■■■□□ 2.05
LRP5-202ENST00000528714 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
LRP5-202ENST00000528714 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
LRP5-202ENST00000528714 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
LRP5-202ENST00000528714 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
LRP5-202ENST00000528714 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
LRP5-202ENST00000528714 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
LRP5-202ENST00000528714 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
LRP5-202ENST00000528714 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
LRP5-202ENST00000528714 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
LRP5-202ENST00000528714 NUP160Q12769 1436 aa27.63■■■□□ 2.01
LRP5-202ENST00000528714 SHROOM2Q13796 1616 aa27.57■■■□□ 2
LRP5-202ENST00000528714 ERICH3Q5RHP9 1530 aa27.52■■■□□ 2
LRP5-202ENST00000528714 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
LRP5-202ENST00000528714 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
LRP5-202ENST00000528714 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
LRP5-202ENST00000528714 KIF13AQ9H1H9 1805 aa27.26■■□□□ 1.95
LRP5-202ENST00000528714 JPH4Q96JJ6 628 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms