Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 BTBD2-206ENST00000589200 858 ntTSL 527.86■■■□□ 2.051e-6■■■■□ 23.8
XRN2Q9H0D6 GUK1-218ENST00000469973 795 ntTSL 230.64■■■□□ 2.57e-9■■■■□ 23.8
XRN2Q9H0D6 PLXNB2-202ENST00000411680 704 ntTSL 220.18■□□□□ 0.821e-7■■■■□ 23.8
XRN2Q9H0D6 PLXNB2-212ENST00000496720 913 ntTSL 318.53■□□□□ 0.561e-7■■■■□ 23.8
XRN2Q9H0D6 ANP32A-208ENST00000495420 707 ntTSL 221.18■□□□□ 0.981e-8■■■■□ 23.8
XRN2Q9H0D6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.311e-8■■■■□ 23.8
XRN2Q9H0D6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.261e-8■■■■□ 23.8
XRN2Q9H0D6 ANP32A-202ENST00000409628 2001 ntTSL 515.21■□□□□ 0.021e-8■■■■□ 23.8
XRN2Q9H0D6 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.236e-36■■■■□ 23.8
XRN2Q9H0D6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.861e-6■■■■□ 23.8
XRN2Q9H0D6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.721e-6■■■■□ 23.8
XRN2Q9H0D6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.071e-6■■■■□ 23.8
XRN2Q9H0D6 SH3BP2-224ENST00000513020 868 ntTSL 314.06□□□□□ -0.161e-6■■■■□ 23.7
XRN2Q9H0D6 CLUH-209ENST00000574210 1243 ntTSL 1 (best)21.01■□□□□ 0.958e-8■■■■□ 23.7
XRN2Q9H0D6 TTYH3-206ENST00000477439 731 ntTSL 219.23■□□□□ 0.674e-6■■■■□ 23.7
XRN2Q9H0D6 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)16.59■□□□□ 0.253e-6■■■■□ 23.7
XRN2Q9H0D6 MAPK8IP3-207ENST00000564098 4436 ntTSL 215.76■□□□□ 0.113e-6■■■■□ 23.7
XRN2Q9H0D6 FLOT1-202ENST00000413165 856 ntTSL 524.07■■□□□ 1.441e-7■■■■□ 23.7
XRN2Q9H0D6 MAPK6-203ENST00000558100 514 ntTSL 216.16■□□□□ 0.184e-14■■■■□ 23.7
XRN2Q9H0D6 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.234e-14■■■■□ 23.7
XRN2Q9H0D6 MAPK6-208ENST00000560802 552 ntTSL 47.04□□□□□ -1.284e-14■■■■□ 23.7
XRN2Q9H0D6 MAPK6-202ENST00000558063 583 ntTSL 43.72□□□□□ -1.814e-14■■■■□ 23.7
XRN2Q9H0D6 MAPK6-206ENST00000560254 574 ntTSL 43.48□□□□□ -1.854e-14■■■■□ 23.7
XRN2Q9H0D6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.475e-7■■■■□ 23.7
XRN2Q9H0D6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.254e-6■■■■□ 23.7
XRN2Q9H0D6 GRB10-212ENST00000439044 733 ntTSL 525.23■■□□□ 1.633e-7■■■■□ 23.7
XRN2Q9H0D6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.87■□□□□ 0.933e-7■■■■□ 23.7
XRN2Q9H0D6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.673e-7■■■■□ 23.7
XRN2Q9H0D6 EIF4G1-224ENST00000444861 2384 ntTSL 1 (best)20.81■□□□□ 0.921e-7■■■■□ 23.7
XRN2Q9H0D6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.1■■□□□ 1.452e-6■■■■□ 23.7
XRN2Q9H0D6 SATB2-204ENST00000440919 2166 ntTSL 1 (best)17.37■□□□□ 0.372e-6■■■■□ 23.7
XRN2Q9H0D6 CLTC-213ENST00000584313 715 ntTSL 316.97■□□□□ 0.312e-6■■■■□ 23.7
XRN2Q9H0D6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.052e-6■■■■□ 23.7
XRN2Q9H0D6 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.152e-6■■■■□ 23.7
XRN2Q9H0D6 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.87□□□□□ -0.352e-6■■■■□ 23.7
XRN2Q9H0D6 ACSS1-204ENST00000484396 4767 ntTSL 1 (best)12.52□□□□□ -0.42e-6■■■■□ 23.7
XRN2Q9H0D6 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.632e-6■■■■□ 23.7
XRN2Q9H0D6 LIN7A-201ENST00000261203 989 ntTSL 1 (best)11.1□□□□□ -0.632e-6■■■■□ 23.7
XRN2Q9H0D6 ACSS1-205ENST00000537502 3509 ntTSL 2 BASIC10.7□□□□□ -0.72e-6■■■■□ 23.7
XRN2Q9H0D6 CLTC-212ENST00000580081 575 ntTSL 49.61□□□□□ -0.872e-6■■■■□ 23.7
XRN2Q9H0D6 LIN7A-202ENST00000549417 905 ntTSL 1 (best)8.83□□□□□ -12e-6■■■■□ 23.7
XRN2Q9H0D6 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.092e-6■■■■□ 23.7
XRN2Q9H0D6 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.172e-6■■■■□ 23.7
XRN2Q9H0D6 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.192e-6■■■■□ 23.7
XRN2Q9H0D6 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.53□□□□□ -1.362e-6■■■■□ 23.7
XRN2Q9H0D6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.052e-7■■■■□ 23.6
XRN2Q9H0D6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.424e-6■■■■□ 23.6
XRN2Q9H0D6 VARS-220ENST00000461874 845 ntTSL 522.72■■□□□ 1.236e-6■■■■□ 23.6
XRN2Q9H0D6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.967e-6■■■■□ 23.6
XRN2Q9H0D6 VARS-216ENST00000428445 863 ntTSL 520.3■□□□□ 0.846e-6■■■■□ 23.6
XRN2Q9H0D6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.256e-6■■■■□ 23.6
XRN2Q9H0D6 VEGFA-221ENST00000520265 336 ntTSL 516.7■□□□□ 0.264e-7■■■■□ 23.6
XRN2Q9H0D6 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.07□□□□□ -0.484e-7■■■■□ 23.6
XRN2Q9H0D6 MAD1L1-205ENST00000421113 564 ntTSL 423.95■■□□□ 1.423e-7■■■■□ 23.5
XRN2Q9H0D6 POLR2A-206ENST00000576553 602 ntTSL 224.57■■□□□ 1.523e-6■■■■□ 23.5
XRN2Q9H0D6 TOR1A-203ENST00000473604 1055 ntTSL 524.11■■□□□ 1.453e-6■■■■□ 23.5
XRN2Q9H0D6 POLD1-204ENST00000593981 873 ntTSL 523.99■■□□□ 1.436e-7■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.332e-6■■■■□ 23.5
XRN2Q9H0D6 PTMA-207ENST00000440384 222 ntTSL 322.3■■□□□ 1.163e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-216ENST00000526055 469 ntTSL 221.87■■□□□ 1.093e-6■■■■□ 23.5
XRN2Q9H0D6 BLVRB-203ENST00000597870 1392 ntTSL 521.53■■□□□ 1.043e-6■■■■□ 23.5
XRN2Q9H0D6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.026e-7■■■■□ 23.5
XRN2Q9H0D6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.923e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.913e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.68■□□□□ 0.92e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.693e-6■■■■□ 23.5
XRN2Q9H0D6 POLD1-206ENST00000596221 412 ntTSL 219.28■□□□□ 0.686e-7■■■■□ 23.5
XRN2Q9H0D6 POLD1-209ENST00000597963 737 ntTSL 219.25■□□□□ 0.676e-7■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.662e-6■■■■□ 23.5
XRN2Q9H0D6 PPARGC1B-206ENST00000461780 566 ntTSL 418.86■□□□□ 0.613e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-210ENST00000464987 2205 ntTSL 518.74■□□□□ 0.593e-6■■■■□ 23.5
XRN2Q9H0D6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.573e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.55■□□□□ 0.563e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-213ENST00000524895 401 ntTSL 417.67■□□□□ 0.423e-6■■■■□ 23.5
XRN2Q9H0D6 RRP1-202ENST00000471909 2544 ntTSL 1 (best)17.63■□□□□ 0.413e-6■■■■□ 23.5
XRN2Q9H0D6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.74■□□□□ 0.273e-6■■■■□ 23.5
XRN2Q9H0D6 TOR1A-204ENST00000474192 947 ntTSL 316.54■□□□□ 0.243e-6■■■■□ 23.5
XRN2Q9H0D6 TSPAN4-220ENST00000532375 518 ntTSL 516.25■□□□□ 0.193e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.193e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-206ENST00000504470 689 ntTSL 216.08■□□□□ 0.163e-6■■■■□ 23.5
XRN2Q9H0D6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.153e-6■■■■□ 23.5
XRN2Q9H0D6 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC15.03■□□□□ -03e-6■■■■□ 23.5
XRN2Q9H0D6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.84□□□□□ -0.033e-6■■■■□ 23.5
XRN2Q9H0D6 BLVRB-204ENST00000601346 676 ntTSL 214.64□□□□□ -0.073e-6■■■■□ 23.5
XRN2Q9H0D6 RRP1-201ENST00000467112 3019 ntTSL 1 (best)14.51□□□□□ -0.093e-6■■■■□ 23.5
XRN2Q9H0D6 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.236e-7■■■■□ 23.5
XRN2Q9H0D6 POLD1-212ENST00000600859 3474 ntTSL 213.35□□□□□ -0.276e-7■■■■□ 23.5
XRN2Q9H0D6 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.1□□□□□ -0.316e-7■■■■□ 23.5
XRN2Q9H0D6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.99□□□□□ -0.336e-7■■■■□ 23.5
XRN2Q9H0D6 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.333e-6■■■■□ 23.5
XRN2Q9H0D6 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.336e-7■■■■□ 23.5
XRN2Q9H0D6 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)11.83□□□□□ -0.523e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-211ENST00000514842 2153 ntTSL 511.13□□□□□ -0.633e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.93e-6■■■■□ 23.5
XRN2Q9H0D6 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.13e-6■■■■□ 23.5
XRN2Q9H0D6 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8□□□□□ -1.133e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-205ENST00000475504 1720 ntTSL 27.81□□□□□ -1.163e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-207ENST00000519078 723 ntTSL 37.1□□□□□ -1.273e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-209ENST00000511075 1028 ntTSL 26.67□□□□□ -1.343e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.63e-6■■■■□ 23.5
Retrieved 100 of 21,068 protein–RNA pairs in 146.5 ms