RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
PPARGC1B-201ENST00000309241 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
PPARGC1B-201ENST00000309241 MYT1Q01538 1121 aa13.73□□□□□ -0.21
PPARGC1B-201ENST00000309241 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
PPARGC1B-201ENST00000309241 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
PPARGC1B-201ENST00000309241 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
PPARGC1B-201ENST00000309241 NISCHQ9Y2I1 1504 aa12.9□□□□□ -0.34
PPARGC1B-201ENST00000309241 APLP2Q06481 763 aa12.9□□□□□ -0.34
PPARGC1B-201ENST00000309241 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1B-201ENST00000309241 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1B-201ENST00000309241 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
PPARGC1B-201ENST00000309241 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
PPARGC1B-201ENST00000309241 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
PPARGC1B-201ENST00000309241 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
PPARGC1B-201ENST00000309241 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
PPARGC1B-201ENST00000309241 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
PPARGC1B-201ENST00000309241 HRCP23327 699 aa12.5□□□□□ -0.41
PPARGC1B-201ENST00000309241 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
PPARGC1B-201ENST00000309241 RANGAP1P46060 587 aaPredicted RBP12.45□□□□□ -0.42
PPARGC1B-201ENST00000309241 NEFLP07196 543 aa12.3□□□□□ -0.44
PPARGC1B-201ENST00000309241 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
PPARGC1B-201ENST00000309241 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
PPARGC1B-201ENST00000309241 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
PPARGC1B-201ENST00000309241 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
PPARGC1B-201ENST00000309241 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
PPARGC1B-201ENST00000309241 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
PPARGC1B-201ENST00000309241 GTF3C3Q9Y5Q9 886 aa12.09□□□□□ -0.47
PPARGC1B-201ENST00000309241 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
PPARGC1B-201ENST00000309241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
PPARGC1B-201ENST00000309241 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
PPARGC1B-201ENST00000309241 POLR3GLQ9BT43 218 aa12.01□□□□□ -0.49
PPARGC1B-201ENST00000309241 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
PPARGC1B-201ENST00000309241 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
PPARGC1B-201ENST00000309241 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
PPARGC1B-201ENST00000309241 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
PPARGC1B-201ENST00000309241 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
PPARGC1B-201ENST00000309241 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-201ENST00000309241 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-201ENST00000309241 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
PPARGC1B-201ENST00000309241 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
PPARGC1B-201ENST00000309241 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
PPARGC1B-201ENST00000309241 ITGAEP38570 1179 aa11.79□□□□□ -0.52
PPARGC1B-201ENST00000309241 BCANQ96GW7 911 aa11.77□□□□□ -0.53
PPARGC1B-201ENST00000309241 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
PPARGC1B-201ENST00000309241 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
PPARGC1B-201ENST00000309241 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
PPARGC1B-201ENST00000309241 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.54
PPARGC1B-201ENST00000309241 NEUROD1Q13562 356 aa11.59□□□□□ -0.55
PPARGC1B-201ENST00000309241 CDK11AQ9UQ88 783 aaPredicted RBP11.58□□□□□ -0.56
PPARGC1B-201ENST00000309241 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
PPARGC1B-201ENST00000309241 NEFMP07197 916 aa11.5□□□□□ -0.57
PPARGC1B-201ENST00000309241 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
PPARGC1B-201ENST00000309241 NBR1Q14596 966 aa11.49□□□□□ -0.57
PPARGC1B-201ENST00000309241 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
PPARGC1B-201ENST00000309241 FBLN2P98095 1184 aa11.47□□□□□ -0.57
PPARGC1B-201ENST00000309241 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
PPARGC1B-201ENST00000309241 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
PPARGC1B-201ENST00000309241 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.58
PPARGC1B-201ENST00000309241 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
PPARGC1B-201ENST00000309241 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
PPARGC1B-201ENST00000309241 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
PPARGC1B-201ENST00000309241 DCAF1Q9Y4B6 1507 aa11.38□□□□□ -0.59
PPARGC1B-201ENST00000309241 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
PPARGC1B-201ENST00000309241 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
PPARGC1B-201ENST00000309241 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
PPARGC1B-201ENST00000309241 A0A0G2JS52 829 aa11.32□□□□□ -0.6
PPARGC1B-201ENST00000309241 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
PPARGC1B-201ENST00000309241 FKBP8Q14318 412 aa11.3□□□□□ -0.6
PPARGC1B-201ENST00000309241 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
PPARGC1B-201ENST00000309241 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
PPARGC1B-201ENST00000309241 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
PPARGC1B-201ENST00000309241 ANP32CO43423 234 aa11.24□□□□□ -0.61
PPARGC1B-201ENST00000309241 CDK11BP21127 795 aaKnown RBP11.23□□□□□ -0.61
PPARGC1B-201ENST00000309241 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
PPARGC1B-201ENST00000309241 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
PPARGC1B-201ENST00000309241 ARID3CA6NKF2 412 aa11.21□□□□□ -0.62
PPARGC1B-201ENST00000309241 HSP90AA1P07900 732 aaKnown RBP11.21□□□□□ -0.62
PPARGC1B-201ENST00000309241 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
PPARGC1B-201ENST00000309241 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
PPARGC1B-201ENST00000309241 UPF2Q9HAU5 1272 aaKnown RBP11.19□□□□□ -0.62
PPARGC1B-201ENST00000309241 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
PPARGC1B-201ENST00000309241 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
PPARGC1B-201ENST00000309241 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPARGC1B-201ENST00000309241 ARXQ96QS3 562 aa11.17□□□□□ -0.62
PPARGC1B-201ENST00000309241 NAP1L5Q96NT1 182 aaPredicted RBP11.16□□□□□ -0.62
PPARGC1B-201ENST00000309241 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
PPARGC1B-201ENST00000309241 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
PPARGC1B-201ENST00000309241 ABCC9O60706 1549 aa11.15□□□□□ -0.62
PPARGC1B-201ENST00000309241 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
PPARGC1B-201ENST00000309241 TRIM44Q96DX7 344 aaPredicted RBP11.13□□□□□ -0.63
PPARGC1B-201ENST00000309241 C14orf37Q86TY3 774 aa11.1□□□□□ -0.63
PPARGC1B-201ENST00000309241 DDRGK1Q96HY6 314 aa11.07□□□□□ -0.64
PPARGC1B-201ENST00000309241 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 EEA1Q15075 1411 aa11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 PKNOX2Q96KN3 472 aa11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
PPARGC1B-201ENST00000309241 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
PPARGC1B-201ENST00000309241 MIER1Q8N108 512 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms