RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
PPARGC1B-202ENST00000360453 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
PPARGC1B-202ENST00000360453 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
PPARGC1B-202ENST00000360453 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
PPARGC1B-202ENST00000360453 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
PPARGC1B-202ENST00000360453 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
PPARGC1B-202ENST00000360453 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
PPARGC1B-202ENST00000360453 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
PPARGC1B-202ENST00000360453 HRCP23327 699 aa22.38■■□□□ 1.17
PPARGC1B-202ENST00000360453 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
PPARGC1B-202ENST00000360453 LOC105371045A0A1W2PR82 267 aa22.24■■□□□ 1.15
PPARGC1B-202ENST00000360453 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
PPARGC1B-202ENST00000360453 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
PPARGC1B-202ENST00000360453 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
PPARGC1B-202ENST00000360453 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
PPARGC1B-202ENST00000360453 TRIM26Q12899 539 aaPredicted RBP21.63■■□□□ 1.05
PPARGC1B-202ENST00000360453 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
PPARGC1B-202ENST00000360453 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
PPARGC1B-202ENST00000360453 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
PPARGC1B-202ENST00000360453 ABCC9O60706 1549 aa21.35■■□□□ 1.01
PPARGC1B-202ENST00000360453 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
PPARGC1B-202ENST00000360453 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
PPARGC1B-202ENST00000360453 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
PPARGC1B-202ENST00000360453 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
PPARGC1B-202ENST00000360453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.05■□□□□ 0.96
PPARGC1B-202ENST00000360453 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
PPARGC1B-202ENST00000360453 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
PPARGC1B-202ENST00000360453 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.94
PPARGC1B-202ENST00000360453 WIZO95785 1651 aa20.87■□□□□ 0.93
PPARGC1B-202ENST00000360453 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
PPARGC1B-202ENST00000360453 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
PPARGC1B-202ENST00000360453 NACADO15069 1562 aa20.61■□□□□ 0.89
PPARGC1B-202ENST00000360453 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
PPARGC1B-202ENST00000360453 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.88
PPARGC1B-202ENST00000360453 DIEXFQ68CQ4 756 aaKnown RBP20.58■□□□□ 0.88
PPARGC1B-202ENST00000360453 SOGA1O94964 1423 aa20.55■□□□□ 0.88
PPARGC1B-202ENST00000360453 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
PPARGC1B-202ENST00000360453 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
PPARGC1B-202ENST00000360453 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
PPARGC1B-202ENST00000360453 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
PPARGC1B-202ENST00000360453 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
PPARGC1B-202ENST00000360453 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
PPARGC1B-202ENST00000360453 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
PPARGC1B-202ENST00000360453 YTHDC1Q96MU7 727 aaKnown RBP20.45■□□□□ 0.86
PPARGC1B-202ENST00000360453 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
PPARGC1B-202ENST00000360453 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
PPARGC1B-202ENST00000360453 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
PPARGC1B-202ENST00000360453 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
PPARGC1B-202ENST00000360453 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
PPARGC1B-202ENST00000360453 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
PPARGC1B-202ENST00000360453 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
PPARGC1B-202ENST00000360453 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
PPARGC1B-202ENST00000360453 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
PPARGC1B-202ENST00000360453 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.833e-7■■■■□ 25.1
PPARGC1B-202ENST00000360453 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
PPARGC1B-202ENST00000360453 MIER1Q8N108 512 aa20.18■□□□□ 0.82
PPARGC1B-202ENST00000360453 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
PPARGC1B-202ENST00000360453 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
PPARGC1B-202ENST00000360453 APLP2Q06481 763 aa20.06■□□□□ 0.8
PPARGC1B-202ENST00000360453 CLIP1P30622 1438 aa20.03■□□□□ 0.8
PPARGC1B-202ENST00000360453 EEA1Q15075 1411 aa20.02■□□□□ 0.8
PPARGC1B-202ENST00000360453 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
PPARGC1B-202ENST00000360453 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
PPARGC1B-202ENST00000360453 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
PPARGC1B-202ENST00000360453 ITGAEP38570 1179 aa19.88■□□□□ 0.77
PPARGC1B-202ENST00000360453 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
PPARGC1B-202ENST00000360453 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
PPARGC1B-202ENST00000360453 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
PPARGC1B-202ENST00000360453 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.75
PPARGC1B-202ENST00000360453 KIF21BO75037 1637 aa19.76■□□□□ 0.75
PPARGC1B-202ENST00000360453 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
PPARGC1B-202ENST00000360453 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
PPARGC1B-202ENST00000360453 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
PPARGC1B-202ENST00000360453 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
PPARGC1B-202ENST00000360453 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
PPARGC1B-202ENST00000360453 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
PPARGC1B-202ENST00000360453 ATP1B4Q9UN42 357 aaPredicted RBP19.54■□□□□ 0.72
PPARGC1B-202ENST00000360453 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
PPARGC1B-202ENST00000360453 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
PPARGC1B-202ENST00000360453 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
PPARGC1B-202ENST00000360453 BCANQ96GW7 911 aa19.5■□□□□ 0.71
PPARGC1B-202ENST00000360453 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
PPARGC1B-202ENST00000360453 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
PPARGC1B-202ENST00000360453 CCNB3Q8WWL7 1395 aa19.45■□□□□ 0.7
PPARGC1B-202ENST00000360453 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
PPARGC1B-202ENST00000360453 CUX1P39880 1505 aa19.44■□□□□ 0.7
PPARGC1B-202ENST00000360453 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
PPARGC1B-202ENST00000360453 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
PPARGC1B-202ENST00000360453 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
PPARGC1B-202ENST00000360453 ARHGAP35Q9NRY4 1499 aa19.4■□□□□ 0.7
PPARGC1B-202ENST00000360453 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
PPARGC1B-202ENST00000360453 RRBP1Q9P2E9 1410 aaKnown RBP19.38■□□□□ 0.69
PPARGC1B-202ENST00000360453 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
PPARGC1B-202ENST00000360453 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
PPARGC1B-202ENST00000360453 MYT1Q01538 1121 aa19.3■□□□□ 0.68
PPARGC1B-202ENST00000360453 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
PPARGC1B-202ENST00000360453 CUX2O14529 1486 aa19.3■□□□□ 0.68
PPARGC1B-202ENST00000360453 TRIM52Q96A61 297 aa19.27■□□□□ 0.67
PPARGC1B-202ENST00000360453 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
PPARGC1B-202ENST00000360453 FKBP8Q14318 412 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms