RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 NISCHQ9Y2I1 1504 aa50.87■■■■■ 5.73
POLR2A-206ENST00000576553 CCDC180Q9P1Z9 1646 aa45.36■■■■■ 4.85
POLR2A-206ENST00000576553 ABCC9O60706 1549 aa44.6■■■■■ 4.73
POLR2A-206ENST00000576553 RB1CC1Q8TDY2 1594 aa42.84■■■■■ 4.45
POLR2A-206ENST00000576553 NACADO15069 1562 aa42.73■■■■■ 4.43
POLR2A-206ENST00000576553 DCAF8L2P0C7V8 631 aa42.65■■■■■ 4.42
POLR2A-206ENST00000576553 MYO15BQ96JP2 1530 aa42.4■■■■■ 4.38
POLR2A-206ENST00000576553 ZCCHC6Q5VYS8 1495 aaKnown RBP42.32■■■■■ 4.37
POLR2A-206ENST00000576553 DCAF1Q9Y4B6 1507 aa42.1■■■■■ 4.33
POLR2A-206ENST00000576553 UNC13AQ9UPW8 1703 aa41.76■■■■■ 4.28
POLR2A-206ENST00000576553 PABPN1Q86U42 306 aaKnown RBP eCLIP41.64■■■■■ 4.26
POLR2A-206ENST00000576553 BICRAQ9NZM4 1560 aa41.48■■■■■ 4.23
POLR2A-206ENST00000576553 SCRIBQ14160 1630 aa41.33■■■■■ 4.21
POLR2A-206ENST00000576553 DNAJC5BQ9UF47 199 aa41.13■■■■■ 4.17
POLR2A-206ENST00000576553 SHROOM4Q9ULL8 1493 aa41.13■■■■■ 4.17
POLR2A-206ENST00000576553 EIF4G1Q04637 1599 aaKnown RBP40.44■■■■■ 4.06
POLR2A-206ENST00000576553 CC2D2AQ9P2K1 1620 aa40.33■■■■■ 4.05
POLR2A-206ENST00000576553 CECR2Q9BXF3 1484 aa40.13■■■■■ 4.02
POLR2A-206ENST00000576553 SMARCA4P51532 1647 aa39.53■■■■□ 3.92
POLR2A-206ENST00000576553 BAZ1AQ9NRL2 1556 aaPredicted RBP39.47■■■■□ 3.91
POLR2A-206ENST00000576553 NCAPD3P42695 1498 aa39.42■■■■□ 3.9
POLR2A-206ENST00000576553 ATAD2BQ9ULI0 1458 aa39.38■■■■□ 3.9
POLR2A-206ENST00000576553 SMARCA2P51531 1590 aa39.37■■■■□ 3.89
POLR2A-206ENST00000576553 HMGXB3Q12766 1538 aa39.2■■■■□ 3.87
POLR2A-206ENST00000576553 MROH2BQ7Z745 1585 aa39.17■■■■□ 3.86
POLR2A-206ENST00000576553 PEG3Q9GZU2 1588 aa39.16■■■■□ 3.86
POLR2A-206ENST00000576553 BAZ1BQ9UIG0 1483 aaKnown RBP39.08■■■■□ 3.85
POLR2A-206ENST00000576553 WIZO95785 1651 aa38.73■■■■□ 3.79
POLR2A-206ENST00000576553 RSF1Q96T23 1441 aaPredicted RBP38.66■■■■□ 3.78
POLR2A-206ENST00000576553 ERCC6Q03468 1493 aa38.53■■■■□ 3.76
POLR2A-206ENST00000576553 NESP48681 1621 aa38.5■■■■□ 3.75
POLR2A-206ENST00000576553 LAMC3Q9Y6N6 1575 aa38.43■■■■□ 3.74
POLR2A-206ENST00000576553 TOP2AP11388 1531 aaKnown RBP38.35■■■■□ 3.73
POLR2A-206ENST00000576553 CADPSQ9ULU8 1353 aa38.26■■■■□ 3.72
POLR2A-206ENST00000576553 CUX2O14529 1486 aa38.21■■■■□ 3.71
POLR2A-206ENST00000576553 PDS5BQ9NTI5 1447 aa38.21■■■■□ 3.71
POLR2A-206ENST00000576553 KIF21AQ7Z4S6 1674 aa38.04■■■■□ 3.68
POLR2A-206ENST00000576553 THOC2Q8NI27 1593 aaKnown RBP37.98■■■■□ 3.67
POLR2A-206ENST00000576553 CFTRP13569 1480 aa37.97■■■■□ 3.67
POLR2A-206ENST00000576553 CCDC88BA6NC98 1476 aa37.89■■■■□ 3.66
POLR2A-206ENST00000576553 FANCD2Q9BXW9 1451 aa37.82■■■■□ 3.64
POLR2A-206ENST00000576553 MRC2Q9UBG0 1479 aa37.81■■■■□ 3.64
POLR2A-206ENST00000576553 CEP164Q9UPV0 1460 aa37.81■■■■□ 3.64
POLR2A-206ENST00000576553 WDR62O43379 1518 aa37.67■■■■□ 3.62
POLR2A-206ENST00000576553 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
POLR2A-206ENST00000576553 SUPT5HO00267 1087 aaKnown RBP37.51■■■■□ 3.6
POLR2A-206ENST00000576553 URB2Q14146 1524 aaKnown RBP37.42■■■■□ 3.58
POLR2A-206ENST00000576553 DNAJC5Q9H3Z4 198 aa37.31■■■■□ 3.56
POLR2A-206ENST00000576553 ABCC8Q09428 1581 aa37.21■■■■□ 3.55
POLR2A-206ENST00000576553 TOPBP1Q92547 1522 aa37.17■■■■□ 3.54
POLR2A-206ENST00000576553 DNMBPQ6XZF7 1577 aa37.12■■■■□ 3.53
POLR2A-206ENST00000576553 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
POLR2A-206ENST00000576553 POLA1P09884 1462 aaPredicted RBP36.84■■■■□ 3.49
POLR2A-206ENST00000576553 ZNF608Q9ULD9 1512 aaPredicted RBP36.83■■■■□ 3.49
POLR2A-206ENST00000576553 CUX1P39880 1505 aa36.78■■■■□ 3.48
POLR2A-206ENST00000576553 TARBP1Q13395 1621 aaKnown RBP36.76■■■■□ 3.48
POLR2A-206ENST00000576553 FGD5Q6ZNL6 1462 aa36.71■■■■□ 3.47
POLR2A-206ENST00000576553 SOGA1O94964 1423 aa36.71■■■■□ 3.47
POLR2A-206ENST00000576553 EIF4G3O43432 1585 aaKnown RBP36.69■■■■□ 3.46
POLR2A-206ENST00000576553 RAD54L2Q9Y4B4 1467 aa36.66■■■■□ 3.46
POLR2A-206ENST00000576553 AQRO60306 1485 aaKnown RBP eCLIP36.61■■■■□ 3.452e-7■■■■■ 35.9
POLR2A-206ENST00000576553 OSCARQ8IYS5 282 aa36.59■■■■□ 3.45
POLR2A-206ENST00000576553 WDR97A6NE52 1622 aa36.52■■■■□ 3.44
POLR2A-206ENST00000576553 TDRD9Q8NDG6 1382 aaKnown RBP36.52■■■■□ 3.44
POLR2A-206ENST00000576553 WRNQ14191 1432 aaPredicted RBP eCLIP36.5■■■■□ 3.43
POLR2A-206ENST00000576553 TOP2BQ02880 1626 aa36.41■■■■□ 3.42
POLR2A-206ENST00000576553 BIVM-ERCC5R4GMW8 1640 aa36.4■■■■□ 3.42
POLR2A-206ENST00000576553 ABCA10Q8WWZ4 1543 aa36.36■■■■□ 3.41
POLR2A-206ENST00000576553 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
POLR2A-206ENST00000576553 GRIN2BQ13224 1484 aa36.32■■■■□ 3.41
POLR2A-206ENST00000576553 GAPVD1Q14C86 1478 aa36.28■■■■□ 3.4
POLR2A-206ENST00000576553 SNAPC4Q5SXM2 1469 aa36.27■■■■□ 3.4
POLR2A-206ENST00000576553 FBLN2P98095 1184 aa36.27■■■■□ 3.4
POLR2A-206ENST00000576553 CHD1O14646 1710 aa36.25■■■■□ 3.39
POLR2A-206ENST00000576553 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
POLR2A-206ENST00000576553 ABCA5Q8WWZ7 1642 aa36.21■■■■□ 3.39
POLR2A-206ENST00000576553 PBRM1Q86U86 1689 aa36.17■■■■□ 3.38
POLR2A-206ENST00000576553 CHMP7Q8WUX9 453 aaPredicted RBP36.15■■■■□ 3.38
POLR2A-206ENST00000576553 SYNJ2O15056 1496 aa36.11■■■■□ 3.37
POLR2A-206ENST00000576553 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
POLR2A-206ENST00000576553 RIMBP3CA6NJZ7 1639 aa35.97■■■■□ 3.35
POLR2A-206ENST00000576553 RIMBP3BA6NNM3 1639 aa35.97■■■■□ 3.35
POLR2A-206ENST00000576553 RIMBP3Q9UFD9 1639 aa35.97■■■■□ 3.35
POLR2A-206ENST00000576553 ARHGEF11O15085 1522 aa35.95■■■■□ 3.35
POLR2A-206ENST00000576553 ERICH3Q5RHP9 1530 aa35.93■■■■□ 3.34
POLR2A-206ENST00000576553 ADAMTS12P58397 1594 aa35.89■■■■□ 3.34
POLR2A-206ENST00000576553 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
POLR2A-206ENST00000576553 FHAD1B1AJZ9 1412 aa35.86■■■■□ 3.33
POLR2A-206ENST00000576553 GRIN2AQ12879 1464 aa35.83■■■■□ 3.33
POLR2A-206ENST00000576553 KIF27Q86VH2 1401 aa35.77■■■■□ 3.32
POLR2A-206ENST00000576553 NUP160Q12769 1436 aa35.68■■■■□ 3.3
POLR2A-206ENST00000576553 CYB5RLQ6IPT4 315 aa35.65■■■■□ 3.3
POLR2A-206ENST00000576553 ARAP1Q96P48 1450 aa35.63■■■■□ 3.29
POLR2A-206ENST00000576553 CEP170Q5SW79 1584 aa35.63■■■■□ 3.29
POLR2A-206ENST00000576553 IGF1RP08069 1367 aa35.62■■■■□ 3.29
POLR2A-206ENST00000576553 CUL7Q14999 1698 aa35.56■■■■□ 3.28
POLR2A-206ENST00000576553 CARMIL1Q5VZK9 1371 aa35.43■■■■□ 3.26
POLR2A-206ENST00000576553 SHROOM2Q13796 1616 aa35.42■■■■□ 3.26
POLR2A-206ENST00000576553 RUSC2Q8N2Y8 1516 aa35.36■■■■□ 3.25
POLR2A-206ENST00000576553 JPH4Q96JJ6 628 aa35.33■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms