RNA–Protein interactions for RNA: ENST00000579456.5

CLTC-210, Transcript of clathrin heavy chain, humanhuman

TSL 5 BASIC

Gene CLTC, Length 2,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-210ENST00000579456 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
CLTC-210ENST00000579456 HRCP23327 699 aa11.91□□□□□ -0.5
CLTC-210ENST00000579456 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
CLTC-210ENST00000579456 DCAF1Q9Y4B6 1507 aa11.61□□□□□ -0.55
CLTC-210ENST00000579456 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
CLTC-210ENST00000579456 ZCCHC6Q5VYS8 1495 aaKnown RBP11.59□□□□□ -0.55
CLTC-210ENST00000579456 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
CLTC-210ENST00000579456 CHIC1Q5VXU3 224 aa11.52□□□□□ -0.57
CLTC-210ENST00000579456 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
CLTC-210ENST00000579456 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
CLTC-210ENST00000579456 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
CLTC-210ENST00000579456 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
CLTC-210ENST00000579456 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
CLTC-210ENST00000579456 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
CLTC-210ENST00000579456 MYT1Q01538 1121 aa11.21□□□□□ -0.62
CLTC-210ENST00000579456 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
CLTC-210ENST00000579456 ABCC9O60706 1549 aa11.06□□□□□ -0.64
CLTC-210ENST00000579456 LOC105371045A0A1W2PR82 267 aa11.06□□□□□ -0.64
CLTC-210ENST00000579456 AEBP2Q6ZN18 517 aaPredicted RBP11.06□□□□□ -0.64
CLTC-210ENST00000579456 ACIN1Q9UKV3 1341 aaKnown RBP10.96□□□□□ -0.65
CLTC-210ENST00000579456 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
CLTC-210ENST00000579456 NEUROD1Q13562 356 aa10.86□□□□□ -0.67
CLTC-210ENST00000579456 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
CLTC-210ENST00000579456 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
CLTC-210ENST00000579456 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
CLTC-210ENST00000579456 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
CLTC-210ENST00000579456 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.691e-7■■■■■ 66.8
CLTC-210ENST00000579456 TRIM41Q8WV44 630 aa10.7□□□□□ -0.7
CLTC-210ENST00000579456 DIEXFQ68CQ4 756 aaKnown RBP10.69□□□□□ -0.7
CLTC-210ENST00000579456 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
CLTC-210ENST00000579456 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
CLTC-210ENST00000579456 CCER1Q8TC90 406 aaPredicted RBP10.6□□□□□ -0.71
CLTC-210ENST00000579456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.59□□□□□ -0.71
CLTC-210ENST00000579456 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
CLTC-210ENST00000579456 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
CLTC-210ENST00000579456 ZNF316A6NFI3 1004 aaPredicted RBP10.55□□□□□ -0.72
CLTC-210ENST00000579456 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
CLTC-210ENST00000579456 FAM9AQ8IZU1 332 aaPredicted RBP10.51□□□□□ -0.73
CLTC-210ENST00000579456 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
CLTC-210ENST00000579456 WIZO95785 1651 aa10.49□□□□□ -0.73
CLTC-210ENST00000579456 NACADO15069 1562 aa10.49□□□□□ -0.73
CLTC-210ENST00000579456 CEP162Q5TB80 1403 aa10.48□□□□□ -0.73
CLTC-210ENST00000579456 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
CLTC-210ENST00000579456 EEA1Q15075 1411 aa10.45□□□□□ -0.74
CLTC-210ENST00000579456 CECR2Q9BXF3 1484 aa10.44□□□□□ -0.74
CLTC-210ENST00000579456 MIER1Q8N108 512 aa10.4□□□□□ -0.74
CLTC-210ENST00000579456 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
CLTC-210ENST00000579456 CCDC88BA6NC98 1476 aa10.36□□□□□ -0.75
CLTC-210ENST00000579456 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
CLTC-210ENST00000579456 KIF21BO75037 1637 aa10.36□□□□□ -0.75
CLTC-210ENST00000579456 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
CLTC-210ENST00000579456 GOLGA3Q08378 1498 aa10.34□□□□□ -0.75
CLTC-210ENST00000579456 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
CLTC-210ENST00000579456 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
CLTC-210ENST00000579456 YTHDC1Q96MU7 727 aaKnown RBP10.32□□□□□ -0.76
CLTC-210ENST00000579456 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
CLTC-210ENST00000579456 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
CLTC-210ENST00000579456 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
CLTC-210ENST00000579456 SOGA1O94964 1423 aa10.28□□□□□ -0.76
CLTC-210ENST00000579456 SMARCA4P51532 1647 aa10.26□□□□□ -0.77
CLTC-210ENST00000579456 BAZ1BQ9UIG0 1483 aaKnown RBP10.26□□□□□ -0.77
CLTC-210ENST00000579456 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
CLTC-210ENST00000579456 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
CLTC-210ENST00000579456 RUSC2Q8N2Y8 1516 aa10.22□□□□□ -0.77
CLTC-210ENST00000579456 CUX2O14529 1486 aa10.22□□□□□ -0.77
CLTC-210ENST00000579456 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
CLTC-210ENST00000579456 DHX57Q6P158 1386 aaKnown RBP10.2□□□□□ -0.78
CLTC-210ENST00000579456 CLIP1P30622 1438 aa10.19□□□□□ -0.78
CLTC-210ENST00000579456 SYNJ1O43426 1573 aa10.14□□□□□ -0.79
CLTC-210ENST00000579456 PEG3Q9GZU2 1588 aa10.14□□□□□ -0.79
CLTC-210ENST00000579456 RRBP1Q9P2E9 1410 aaKnown RBP10.12□□□□□ -0.79
CLTC-210ENST00000579456 UNC13AQ9UPW8 1703 aa10.11□□□□□ -0.79
CLTC-210ENST00000579456 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
CLTC-210ENST00000579456 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
CLTC-210ENST00000579456 UBTFP17480 764 aaKnown RBP10.08□□□□□ -0.8
CLTC-210ENST00000579456 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
CLTC-210ENST00000579456 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
CLTC-210ENST00000579456 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
CLTC-210ENST00000579456 BIVM-ERCC5R4GMW8 1640 aa10.05□□□□□ -0.8
CLTC-210ENST00000579456 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
CLTC-210ENST00000579456 RBM19Q9Y4C8 960 aaKnown RBP10.01□□□□□ -0.81
CLTC-210ENST00000579456 DNAJC5BQ9UF47 199 aa10□□□□□ -0.81
CLTC-210ENST00000579456 FANCIQ9NVI1 1328 aa9.99□□□□□ -0.81
CLTC-210ENST00000579456 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
CLTC-210ENST00000579456 MAP3K1Q13233 1512 aa9.98□□□□□ -0.81
CLTC-210ENST00000579456 MYT1LQ9UL68 1186 aa9.96□□□□□ -0.81
CLTC-210ENST00000579456 APLP2Q06481 763 aa9.96□□□□□ -0.82
CLTC-210ENST00000579456 CCER2I3L3R5 266 aa9.95□□□□□ -0.82
CLTC-210ENST00000579456 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLTC-210ENST00000579456 WDR97A6NE52 1622 aa9.95□□□□□ -0.82
CLTC-210ENST00000579456 MSH5O43196 834 aa9.95□□□□□ -0.82
CLTC-210ENST00000579456 FKBP8Q14318 412 aa9.95□□□□□ -0.82
CLTC-210ENST00000579456 CCNB3Q8WWL7 1395 aa9.94□□□□□ -0.82
CLTC-210ENST00000579456 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
CLTC-210ENST00000579456 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
CLTC-210ENST00000579456 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.82
CLTC-210ENST00000579456 CFAP43Q8NDM7 1665 aa9.9□□□□□ -0.83
CLTC-210ENST00000579456 TIAM1Q13009 1591 aa9.9□□□□□ -0.83
CLTC-210ENST00000579456 NEFLP07196 543 aa9.89□□□□□ -0.83
CLTC-210ENST00000579456 RAB3GAP2Q9H2M9 1393 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms