RNA–Protein interactions for RNA: ENST00000182527.3

TRAM2-201, Transcript of translocation associated membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM2, Length 6,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-201ENST00000182527 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
TRAM2-201ENST00000182527 FAM9AQ8IZU1 332 aaPredicted RBP13.17□□□□□ -0.3
TRAM2-201ENST00000182527 NISCHQ9Y2I1 1504 aa13.1□□□□□ -0.31
TRAM2-201ENST00000182527 AEBP2Q6ZN18 517 aaPredicted RBP12.37□□□□□ -0.43
TRAM2-201ENST00000182527 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
TRAM2-201ENST00000182527 ABCC9O60706 1549 aa12.24□□□□□ -0.45
TRAM2-201ENST00000182527 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAM2-201ENST00000182527 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
TRAM2-201ENST00000182527 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
TRAM2-201ENST00000182527 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
TRAM2-201ENST00000182527 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
TRAM2-201ENST00000182527 FBLN2P98095 1184 aa11.95□□□□□ -0.5
TRAM2-201ENST00000182527 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAM2-201ENST00000182527 CHIC1Q5VXU3 224 aa11.92□□□□□ -0.5
TRAM2-201ENST00000182527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
TRAM2-201ENST00000182527 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
TRAM2-201ENST00000182527 APLP2Q06481 763 aa11.9□□□□□ -0.5
TRAM2-201ENST00000182527 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
TRAM2-201ENST00000182527 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
TRAM2-201ENST00000182527 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
TRAM2-201ENST00000182527 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
TRAM2-201ENST00000182527 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
TRAM2-201ENST00000182527 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
TRAM2-201ENST00000182527 BCANQ96GW7 911 aa11.66□□□□□ -0.54
TRAM2-201ENST00000182527 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
TRAM2-201ENST00000182527 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
TRAM2-201ENST00000182527 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
TRAM2-201ENST00000182527 FOXD1Q16676 465 aa11.46□□□□□ -0.58
TRAM2-201ENST00000182527 ARID4BQ4LE39 1312 aaPredicted RBP11.43□□□□□ -0.58
TRAM2-201ENST00000182527 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
TRAM2-201ENST00000182527 SLC4A1APQ9BWU0 796 aaKnown RBP11.36□□□□□ -0.59
TRAM2-201ENST00000182527 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
TRAM2-201ENST00000182527 PHF23Q9BUL5 403 aaPredicted RBP11.3□□□□□ -0.6
TRAM2-201ENST00000182527 A0A0G2JS52 829 aa11.26□□□□□ -0.61
TRAM2-201ENST00000182527 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
TRAM2-201ENST00000182527 RB1CC1Q8TDY2 1594 aa11.25□□□□□ -0.61
TRAM2-201ENST00000182527 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
TRAM2-201ENST00000182527 C14orf37Q86TY3 774 aa11.21□□□□□ -0.62
TRAM2-201ENST00000182527 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
TRAM2-201ENST00000182527 MYT1Q01538 1121 aa11.19□□□□□ -0.62
TRAM2-201ENST00000182527 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
TRAM2-201ENST00000182527 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
TRAM2-201ENST00000182527 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
TRAM2-201ENST00000182527 CDK11AQ9UQ88 783 aaPredicted RBP11.06□□□□□ -0.64
TRAM2-201ENST00000182527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
TRAM2-201ENST00000182527 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
TRAM2-201ENST00000182527 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
TRAM2-201ENST00000182527 SCRIBQ14160 1630 aa10.98□□□□□ -0.65
TRAM2-201ENST00000182527 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
TRAM2-201ENST00000182527 PPP1R15AO75807 674 aaPredicted RBP10.94□□□□□ -0.66
TRAM2-201ENST00000182527 ARID3CA6NKF2 412 aa10.92□□□□□ -0.66
TRAM2-201ENST00000182527 CHGAP10645 457 aaKnown RBP10.92□□□□□ -0.66
TRAM2-201ENST00000182527 NPM2Q86SE8 214 aaKnown RBP10.92□□□□□ -0.66
TRAM2-201ENST00000182527 KCNH8Q96L42 1107 aa10.91□□□□□ -0.66
TRAM2-201ENST00000182527 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
TRAM2-201ENST00000182527 POLR3GLQ9BT43 218 aa10.89□□□□□ -0.67
TRAM2-201ENST00000182527 ZNF777Q9ULD5 760 aaPredicted RBP10.88□□□□□ -0.67
TRAM2-201ENST00000182527 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
TRAM2-201ENST00000182527 MLECQ14165 292 aa10.84□□□□□ -0.67
TRAM2-201ENST00000182527 SF3B2Q13435 895 aaKnown RBP10.84□□□□□ -0.67
TRAM2-201ENST00000182527 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
TRAM2-201ENST00000182527 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.67
TRAM2-201ENST00000182527 NPHP1O15259 732 aa10.83□□□□□ -0.68
TRAM2-201ENST00000182527 NACADO15069 1562 aa10.8□□□□□ -0.68
TRAM2-201ENST00000182527 CCDC9Q9Y3X0 531 aaKnown RBP10.79□□□□□ -0.68
TRAM2-201ENST00000182527 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.68
TRAM2-201ENST00000182527 NEFMP07197 916 aa10.75□□□□□ -0.69
TRAM2-201ENST00000182527 ITGAEP38570 1179 aa10.72□□□□□ -0.69
TRAM2-201ENST00000182527 TRIM52Q96A61 297 aa10.7□□□□□ -0.7
TRAM2-201ENST00000182527 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
TRAM2-201ENST00000182527 CCDC180Q9P1Z9 1646 aa10.69□□□□□ -0.7
TRAM2-201ENST00000182527 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
TRAM2-201ENST00000182527 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
TRAM2-201ENST00000182527 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
TRAM2-201ENST00000182527 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
TRAM2-201ENST00000182527 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
TRAM2-201ENST00000182527 CCER1Q8TC90 406 aaPredicted RBP10.65□□□□□ -0.7
TRAM2-201ENST00000182527 ZNF326Q5BKZ1 582 aaKnown RBP10.64□□□□□ -0.71
TRAM2-201ENST00000182527 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
TRAM2-201ENST00000182527 FAM50AQ14320 339 aaKnown RBP10.61□□□□□ -0.71
TRAM2-201ENST00000182527 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
TRAM2-201ENST00000182527 ARXQ96QS3 562 aa10.59□□□□□ -0.71
TRAM2-201ENST00000182527 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
TRAM2-201ENST00000182527 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
TRAM2-201ENST00000182527 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
TRAM2-201ENST00000182527 PPP1R1BQ9UD71 204 aaPredicted RBP10.56□□□□□ -0.72
TRAM2-201ENST00000182527 PIP4K2BP78356 416 aa10.54□□□□□ -0.72
TRAM2-201ENST00000182527 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
TRAM2-201ENST00000182527 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
TRAM2-201ENST00000182527 CNGB1Q14028 1251 aaPredicted RBP10.52□□□□□ -0.72
TRAM2-201ENST00000182527 CARMIL2Q6F5E8 1435 aa10.51□□□□□ -0.73
TRAM2-201ENST00000182527 MSH5O43196 834 aa10.5□□□□□ -0.73
TRAM2-201ENST00000182527 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
TRAM2-201ENST00000182527 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
TRAM2-201ENST00000182527 SMARCA2P51531 1590 aa10.47□□□□□ -0.73
TRAM2-201ENST00000182527 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
TRAM2-201ENST00000182527 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
TRAM2-201ENST00000182527 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
TRAM2-201ENST00000182527 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
TRAM2-201ENST00000182527 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms