RNA–Protein interactions for RNA: ENST00000440232.6

POLD1-201, Transcript of DNA polymerase delta 1, catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLD1, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD1-201ENST00000440232 NISCHQ9Y2I1 1504 aa26.57■■□□□ 1.84
POLD1-201ENST00000440232 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
POLD1-201ENST00000440232 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
POLD1-201ENST00000440232 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
POLD1-201ENST00000440232 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
POLD1-201ENST00000440232 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
POLD1-201ENST00000440232 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
POLD1-201ENST00000440232 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
POLD1-201ENST00000440232 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
POLD1-201ENST00000440232 HRCP23327 699 aa21.92■■□□□ 1.1
POLD1-201ENST00000440232 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
POLD1-201ENST00000440232 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
POLD1-201ENST00000440232 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
POLD1-201ENST00000440232 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
POLD1-201ENST00000440232 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
POLD1-201ENST00000440232 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
POLD1-201ENST00000440232 TRIM41Q8WV44 630 aa21.3■■□□□ 1
POLD1-201ENST00000440232 SCRIBQ14160 1630 aa21.27■■□□□ 1
POLD1-201ENST00000440232 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
POLD1-201ENST00000440232 ABCC9O60706 1549 aa21.21■□□□□ 0.99
POLD1-201ENST00000440232 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
POLD1-201ENST00000440232 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
POLD1-201ENST00000440232 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
POLD1-201ENST00000440232 ZEB1P37275 1124 aaPredicted RBP20.85■□□□□ 0.93
POLD1-201ENST00000440232 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
POLD1-201ENST00000440232 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.91
POLD1-201ENST00000440232 WIZO95785 1651 aa20.64■□□□□ 0.89
POLD1-201ENST00000440232 NACADO15069 1562 aa20.64■□□□□ 0.89
POLD1-201ENST00000440232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
POLD1-201ENST00000440232 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
POLD1-201ENST00000440232 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
POLD1-201ENST00000440232 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
POLD1-201ENST00000440232 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
POLD1-201ENST00000440232 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
POLD1-201ENST00000440232 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
POLD1-201ENST00000440232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.843e-6■■■■□ 23.3
POLD1-201ENST00000440232 SOGA1O94964 1423 aa20.28■□□□□ 0.84
POLD1-201ENST00000440232 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
POLD1-201ENST00000440232 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
POLD1-201ENST00000440232 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
POLD1-201ENST00000440232 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
POLD1-201ENST00000440232 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
POLD1-201ENST00000440232 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
POLD1-201ENST00000440232 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
POLD1-201ENST00000440232 MYT1Q01538 1121 aa20.15■□□□□ 0.82
POLD1-201ENST00000440232 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.82
POLD1-201ENST00000440232 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
POLD1-201ENST00000440232 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
POLD1-201ENST00000440232 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
POLD1-201ENST00000440232 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
POLD1-201ENST00000440232 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
POLD1-201ENST00000440232 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
POLD1-201ENST00000440232 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
POLD1-201ENST00000440232 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
POLD1-201ENST00000440232 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
POLD1-201ENST00000440232 EEA1Q15075 1411 aa19.96■□□□□ 0.79
POLD1-201ENST00000440232 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
POLD1-201ENST00000440232 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
POLD1-201ENST00000440232 APLP2Q06481 763 aa19.91■□□□□ 0.78
POLD1-201ENST00000440232 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
POLD1-201ENST00000440232 CLIP1P30622 1438 aa19.84■□□□□ 0.77
POLD1-201ENST00000440232 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
POLD1-201ENST00000440232 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
POLD1-201ENST00000440232 BICRAQ9NZM4 1560 aa19.75■□□□□ 0.75
POLD1-201ENST00000440232 MIER1Q8N108 512 aa19.75■□□□□ 0.75
POLD1-201ENST00000440232 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
POLD1-201ENST00000440232 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
POLD1-201ENST00000440232 VPS8Q8N3P4 1428 aa19.69■□□□□ 0.74
POLD1-201ENST00000440232 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
POLD1-201ENST00000440232 KIF21BO75037 1637 aa19.61■□□□□ 0.73
POLD1-201ENST00000440232 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
POLD1-201ENST00000440232 ITGAEP38570 1179 aa19.56■□□□□ 0.72
POLD1-201ENST00000440232 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
POLD1-201ENST00000440232 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
POLD1-201ENST00000440232 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
POLD1-201ENST00000440232 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
POLD1-201ENST00000440232 PRXQ9BXM0 1461 aa19.36■□□□□ 0.69
POLD1-201ENST00000440232 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
POLD1-201ENST00000440232 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
POLD1-201ENST00000440232 CUX1P39880 1505 aa19.29■□□□□ 0.68
POLD1-201ENST00000440232 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
POLD1-201ENST00000440232 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
POLD1-201ENST00000440232 CCNB3Q8WWL7 1395 aa19.26■□□□□ 0.67
POLD1-201ENST00000440232 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
POLD1-201ENST00000440232 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
POLD1-201ENST00000440232 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
POLD1-201ENST00000440232 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
POLD1-201ENST00000440232 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
POLD1-201ENST00000440232 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
POLD1-201ENST00000440232 CUX2O14529 1486 aa19.17■□□□□ 0.66
POLD1-201ENST00000440232 KCNH8Q96L42 1107 aa19.15■□□□□ 0.66
POLD1-201ENST00000440232 RAB3GAP2Q9H2M9 1393 aa19.15■□□□□ 0.66
POLD1-201ENST00000440232 CFTRP13569 1480 aa19.13■□□□□ 0.65
POLD1-201ENST00000440232 SUPT16HQ9Y5B9 1047 aaKnown RBP19.13■□□□□ 0.65
POLD1-201ENST00000440232 IGF1RP08069 1367 aa19.12■□□□□ 0.65
POLD1-201ENST00000440232 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
POLD1-201ENST00000440232 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
POLD1-201ENST00000440232 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
POLD1-201ENST00000440232 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
POLD1-201ENST00000440232 DDX10Q13206 875 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms