RNA–Protein interactions for RNA: ENST00000599857.5

POLD1-210, Transcript of DNA polymerase delta 1, catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLD1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD1-210ENST00000599857 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
POLD1-210ENST00000599857 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
POLD1-210ENST00000599857 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
POLD1-210ENST00000599857 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.39
POLD1-210ENST00000599857 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
POLD1-210ENST00000599857 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
POLD1-210ENST00000599857 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
POLD1-210ENST00000599857 DCAF1Q9Y4B6 1507 aa22.6■■□□□ 1.21
POLD1-210ENST00000599857 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
POLD1-210ENST00000599857 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
POLD1-210ENST00000599857 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
POLD1-210ENST00000599857 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
POLD1-210ENST00000599857 ABCC9O60706 1549 aa22.19■■□□□ 1.14
POLD1-210ENST00000599857 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
POLD1-210ENST00000599857 HRCP23327 699 aa22.07■■□□□ 1.12
POLD1-210ENST00000599857 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
POLD1-210ENST00000599857 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
POLD1-210ENST00000599857 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
POLD1-210ENST00000599857 NACADO15069 1562 aa21.82■■□□□ 1.08
POLD1-210ENST00000599857 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
POLD1-210ENST00000599857 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
POLD1-210ENST00000599857 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
POLD1-210ENST00000599857 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
POLD1-210ENST00000599857 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
POLD1-210ENST00000599857 WIZO95785 1651 aa21.45■■□□□ 1.02
POLD1-210ENST00000599857 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.013e-6■■■■□ 23.3
POLD1-210ENST00000599857 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
POLD1-210ENST00000599857 ZEB1P37275 1124 aaPredicted RBP21.32■■□□□ 1
POLD1-210ENST00000599857 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
POLD1-210ENST00000599857 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.98
POLD1-210ENST00000599857 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
POLD1-210ENST00000599857 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
POLD1-210ENST00000599857 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
POLD1-210ENST00000599857 ABCC8Q09428 1581 aa21.08■□□□□ 0.96
POLD1-210ENST00000599857 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
POLD1-210ENST00000599857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21■□□□□ 0.95
POLD1-210ENST00000599857 CSRNP3Q8WYN3 585 aa21■□□□□ 0.95
POLD1-210ENST00000599857 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
POLD1-210ENST00000599857 SOGA1O94964 1423 aa20.95■□□□□ 0.94
POLD1-210ENST00000599857 UNC13AQ9UPW8 1703 aa20.89■□□□□ 0.93
POLD1-210ENST00000599857 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
POLD1-210ENST00000599857 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
POLD1-210ENST00000599857 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
POLD1-210ENST00000599857 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
POLD1-210ENST00000599857 EEA1Q15075 1411 aa20.8■□□□□ 0.92
POLD1-210ENST00000599857 TNIKQ9UKE5 1360 aa20.79■□□□□ 0.92
POLD1-210ENST00000599857 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
POLD1-210ENST00000599857 APLP2Q06481 763 aa20.77■□□□□ 0.92
POLD1-210ENST00000599857 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
POLD1-210ENST00000599857 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
POLD1-210ENST00000599857 GOLGA3Q08378 1498 aa20.69■□□□□ 0.9
POLD1-210ENST00000599857 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
POLD1-210ENST00000599857 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
POLD1-210ENST00000599857 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.88
POLD1-210ENST00000599857 CLIP1P30622 1438 aa20.55■□□□□ 0.88
POLD1-210ENST00000599857 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
POLD1-210ENST00000599857 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
POLD1-210ENST00000599857 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
POLD1-210ENST00000599857 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
POLD1-210ENST00000599857 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
POLD1-210ENST00000599857 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
POLD1-210ENST00000599857 KIF21BO75037 1637 aa20.32■□□□□ 0.84
POLD1-210ENST00000599857 CENPBP07199 599 aaPredicted RBP20.31■□□□□ 0.84
POLD1-210ENST00000599857 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
POLD1-210ENST00000599857 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
POLD1-210ENST00000599857 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
POLD1-210ENST00000599857 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
POLD1-210ENST00000599857 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
POLD1-210ENST00000599857 ITGAEP38570 1179 aa20.21■□□□□ 0.83
POLD1-210ENST00000599857 YTHDC1Q96MU7 727 aaKnown RBP20.2■□□□□ 0.82
POLD1-210ENST00000599857 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
POLD1-210ENST00000599857 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
POLD1-210ENST00000599857 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
POLD1-210ENST00000599857 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
POLD1-210ENST00000599857 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
POLD1-210ENST00000599857 CUX1P39880 1505 aa20.1■□□□□ 0.81
POLD1-210ENST00000599857 PRXQ9BXM0 1461 aa20.1■□□□□ 0.81
POLD1-210ENST00000599857 CFTRP13569 1480 aa20.08■□□□□ 0.81
POLD1-210ENST00000599857 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
POLD1-210ENST00000599857 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
POLD1-210ENST00000599857 CUX2O14529 1486 aa20.05■□□□□ 0.8
POLD1-210ENST00000599857 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
POLD1-210ENST00000599857 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
POLD1-210ENST00000599857 CADPSQ9ULU8 1353 aa20.01■□□□□ 0.79
POLD1-210ENST00000599857 ARAP1Q96P48 1450 aa20■□□□□ 0.79
POLD1-210ENST00000599857 MIER1Q8N108 512 aa19.99■□□□□ 0.79
POLD1-210ENST00000599857 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
POLD1-210ENST00000599857 IGF1RP08069 1367 aa19.93■□□□□ 0.78
POLD1-210ENST00000599857 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
POLD1-210ENST00000599857 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
POLD1-210ENST00000599857 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
POLD1-210ENST00000599857 CLSPNQ9HAW4 1339 aa19.87■□□□□ 0.77
POLD1-210ENST00000599857 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
POLD1-210ENST00000599857 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
POLD1-210ENST00000599857 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
POLD1-210ENST00000599857 RRBP1Q9P2E9 1410 aaKnown RBP19.77■□□□□ 0.76
POLD1-210ENST00000599857 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
POLD1-210ENST00000599857 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
POLD1-210ENST00000599857 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
POLD1-210ENST00000599857 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms