Protein–RNA interactions for Protein: Q309B1

TRIM16L, Tripartite motif-containing protein 16-like protein, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16LQ309B1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16LQ309B1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM16LQ309B1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM16LQ309B1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16LQ309B1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 AC007225.1-201ENST00000566331 1836 ntBASIC18.19■□□□□ 0.5
TRIM16LQ309B1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 AL032819.2-201ENST00000624543 2162 ntBASIC18.19■□□□□ 0.5
TRIM16LQ309B1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM16LQ309B1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 LINC01529-204ENST00000636474 1715 ntBASIC18.18■□□□□ 0.5
TRIM16LQ309B1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM16LQ309B1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 TCF3P1-201ENST00000423021 1937 ntBASIC18.17■□□□□ 0.5
TRIM16LQ309B1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 AC120024.1-201ENST00000562672 995 ntBASIC18.17■□□□□ 0.5
TRIM16LQ309B1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 AC019171.1-201ENST00000601251 1056 ntBASIC18.17■□□□□ 0.5
TRIM16LQ309B1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM16LQ309B1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM16LQ309B1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms