RNA–Protein interactions for RNA: ENST00000417410.6

SMIM19-203, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM19, Length 1,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-203ENST00000417410 NISCHQ9Y2I1 1504 aa52.89■■■■■ 6.06
SMIM19-203ENST00000417410 CCDC180Q9P1Z9 1646 aa46.95■■■■■ 5.11
SMIM19-203ENST00000417410 ABCC9O60706 1549 aa45.74■■■■■ 4.91
SMIM19-203ENST00000417410 DCAF8L2P0C7V8 631 aa44.16■■■■■ 4.66
SMIM19-203ENST00000417410 RB1CC1Q8TDY2 1594 aa44.12■■■■■ 4.65
SMIM19-203ENST00000417410 NACADO15069 1562 aa44.11■■■■■ 4.65
SMIM19-203ENST00000417410 ZCCHC6Q5VYS8 1495 aaKnown RBP44.08■■■■■ 4.65
SMIM19-203ENST00000417410 MYO15BQ96JP2 1530 aa43.93■■■■■ 4.62
SMIM19-203ENST00000417410 DCAF1Q9Y4B6 1507 aa43.8■■■■■ 4.6
SMIM19-203ENST00000417410 UNC13AQ9UPW8 1703 aa43.08■■■■■ 4.49
SMIM19-203ENST00000417410 SCRIBQ14160 1630 aa42.81■■■■■ 4.44
SMIM19-203ENST00000417410 PABPN1Q86U42 306 aaKnown RBP eCLIP42.79■■■■■ 4.44
SMIM19-203ENST00000417410 BICRAQ9NZM4 1560 aa42.73■■■■■ 4.43
SMIM19-203ENST00000417410 SHROOM4Q9ULL8 1493 aa42.35■■■■■ 4.37
SMIM19-203ENST00000417410 DNAJC5BQ9UF47 199 aa41.82■■■■■ 4.29
SMIM19-203ENST00000417410 EIF4G1Q04637 1599 aaKnown RBP41.6■■■■■ 4.25
SMIM19-203ENST00000417410 CC2D2AQ9P2K1 1620 aa41.39■■■■■ 4.22
SMIM19-203ENST00000417410 CECR2Q9BXF3 1484 aa41.16■■■■■ 4.18
SMIM19-203ENST00000417410 BAZ1AQ9NRL2 1556 aaPredicted RBP41■■■■■ 4.15
SMIM19-203ENST00000417410 SMARCA4P51532 1647 aa40.99■■■■■ 4.15
SMIM19-203ENST00000417410 MROH2BQ7Z745 1585 aa40.74■■■■■ 4.11
SMIM19-203ENST00000417410 ATAD2BQ9ULI0 1458 aa40.73■■■■■ 4.11
SMIM19-203ENST00000417410 SMARCA2P51531 1590 aa40.71■■■■■ 4.11
SMIM19-203ENST00000417410 NCAPD3P42695 1498 aa40.71■■■■■ 4.11
SMIM19-203ENST00000417410 PEG3Q9GZU2 1588 aa40.6■■■■■ 4.09
SMIM19-203ENST00000417410 HMGXB3Q12766 1538 aa40.5■■■■■ 4.07
SMIM19-203ENST00000417410 BAZ1BQ9UIG0 1483 aaKnown RBP40.41■■■■■ 4.06
SMIM19-203ENST00000417410 RSF1Q96T23 1441 aaPredicted RBP40.36■■■■■ 4.05
SMIM19-203ENST00000417410 WIZO95785 1651 aa40.31■■■■■ 4.04
SMIM19-203ENST00000417410 TOP2AP11388 1531 aaKnown RBP39.91■■■■□ 3.98
SMIM19-203ENST00000417410 NESP48681 1621 aa39.62■■■■□ 3.93
SMIM19-203ENST00000417410 LAMC3Q9Y6N6 1575 aa39.6■■■■□ 3.93
SMIM19-203ENST00000417410 CADPSQ9ULU8 1353 aa39.54■■■■□ 3.92
SMIM19-203ENST00000417410 SUPT5HO00267 1087 aaKnown RBP39.5■■■■□ 3.91
SMIM19-203ENST00000417410 CCDC88BA6NC98 1476 aa39.45■■■■□ 3.91
SMIM19-203ENST00000417410 ERCC6Q03468 1493 aa39.44■■■■□ 3.9
SMIM19-203ENST00000417410 PDS5BQ9NTI5 1447 aa39.35■■■■□ 3.89
SMIM19-203ENST00000417410 CFTRP13569 1480 aa39.33■■■■□ 3.89
SMIM19-203ENST00000417410 KIF21AQ7Z4S6 1674 aa39.16■■■■□ 3.86
SMIM19-203ENST00000417410 FANCD2Q9BXW9 1451 aa39.06■■■■□ 3.84
SMIM19-203ENST00000417410 PRDM2Q13029 1718 aa39.04■■■■□ 3.84
SMIM19-203ENST00000417410 CEP164Q9UPV0 1460 aa39■■■■□ 3.83
SMIM19-203ENST00000417410 THOC2Q8NI27 1593 aaKnown RBP38.98■■■■□ 3.83
SMIM19-203ENST00000417410 CUX2O14529 1486 aa38.97■■■■□ 3.83
SMIM19-203ENST00000417410 MRC2Q9UBG0 1479 aa38.9■■■■□ 3.82
SMIM19-203ENST00000417410 WDR62O43379 1518 aa38.75■■■■□ 3.79
SMIM19-203ENST00000417410 URB2Q14146 1524 aaKnown RBP38.63■■■■□ 3.77
SMIM19-203ENST00000417410 ABCC8Q09428 1581 aa38.51■■■■□ 3.76
SMIM19-203ENST00000417410 TOPBP1Q92547 1522 aa38.45■■■■□ 3.75
SMIM19-203ENST00000417410 DNMBPQ6XZF7 1577 aa38.42■■■■□ 3.74
SMIM19-203ENST00000417410 CUX1P39880 1505 aa38.21■■■■□ 3.71
SMIM19-203ENST00000417410 IFT140Q96RY7 1462 aa38.19■■■■□ 3.7
SMIM19-203ENST00000417410 POLA1P09884 1462 aaPredicted RBP38.13■■■■□ 3.69
SMIM19-203ENST00000417410 WRNQ14191 1432 aaPredicted RBP eCLIP38.07■■■■□ 3.68
SMIM19-203ENST00000417410 FGD5Q6ZNL6 1462 aa38.06■■■■□ 3.68
SMIM19-203ENST00000417410 SOGA1O94964 1423 aa38.01■■■■□ 3.68
SMIM19-203ENST00000417410 TARBP1Q13395 1621 aaKnown RBP38.01■■■■□ 3.67
SMIM19-203ENST00000417410 RAD54L2Q9Y4B4 1467 aa37.96■■■■□ 3.67
SMIM19-203ENST00000417410 TOP2BQ02880 1626 aa37.95■■■■□ 3.67
SMIM19-203ENST00000417410 ZNF608Q9ULD9 1512 aaPredicted RBP37.95■■■■□ 3.67
SMIM19-203ENST00000417410 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
SMIM19-203ENST00000417410 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
SMIM19-203ENST00000417410 EIF4G3O43432 1585 aaKnown RBP37.81■■■■□ 3.64
SMIM19-203ENST00000417410 AQRO60306 1485 aaKnown RBP eCLIP37.79■■■■□ 3.64
SMIM19-203ENST00000417410 WDR97A6NE52 1622 aa37.76■■■■□ 3.64
SMIM19-203ENST00000417410 TDRD9Q8NDG6 1382 aaKnown RBP37.75■■■■□ 3.63
SMIM19-203ENST00000417410 ABCA10Q8WWZ4 1543 aa37.73■■■■□ 3.63
SMIM19-203ENST00000417410 DNAJC5Q9H3Z4 198 aa37.58■■■■□ 3.61
SMIM19-203ENST00000417410 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.6
SMIM19-203ENST00000417410 GRIN2BQ13224 1484 aa37.54■■■■□ 3.6
SMIM19-203ENST00000417410 ABCA5Q8WWZ7 1642 aa37.53■■■■□ 3.6
SMIM19-203ENST00000417410 PBRM1Q86U86 1689 aa37.45■■■■□ 3.58
SMIM19-203ENST00000417410 OSCARQ8IYS5 282 aa37.44■■■■□ 3.58
SMIM19-203ENST00000417410 SNAPC4Q5SXM2 1469 aa37.43■■■■□ 3.58
SMIM19-203ENST00000417410 MAGI1Q96QZ7 1491 aaPredicted RBP37.42■■■■□ 3.58
SMIM19-203ENST00000417410 FBLN2P98095 1184 aa37.33■■■■□ 3.57
SMIM19-203ENST00000417410 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
SMIM19-203ENST00000417410 CHD1O14646 1710 aa37.31■■■■□ 3.56
SMIM19-203ENST00000417410 ERICH3Q5RHP9 1530 aa37.28■■■■□ 3.56
SMIM19-203ENST00000417410 CHMP7Q8WUX9 453 aaPredicted RBP37.28■■■■□ 3.56
SMIM19-203ENST00000417410 KIF27Q86VH2 1401 aa37.27■■■■□ 3.56
SMIM19-203ENST00000417410 SYNJ2O15056 1496 aa37.27■■■■□ 3.56
SMIM19-203ENST00000417410 ADAMTS12P58397 1594 aa37.15■■■■□ 3.54
SMIM19-203ENST00000417410 FHAD1B1AJZ9 1412 aa37.15■■■■□ 3.54
SMIM19-203ENST00000417410 IGF1RP08069 1367 aa37.1■■■■□ 3.53
SMIM19-203ENST00000417410 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
SMIM19-203ENST00000417410 CUL7Q14999 1698 aa36.98■■■■□ 3.51
SMIM19-203ENST00000417410 CHIC1Q5VXU3 224 aa36.97■■■■□ 3.51
SMIM19-203ENST00000417410 RUSC2Q8N2Y8 1516 aa36.94■■■■□ 3.5
SMIM19-203ENST00000417410 CLASP1Q7Z460 1538 aa36.91■■■■□ 3.5
SMIM19-203ENST00000417410 CARMIL1Q5VZK9 1371 aa36.89■■■■□ 3.5
SMIM19-203ENST00000417410 NUP160Q12769 1436 aa36.87■■■■□ 3.49
SMIM19-203ENST00000417410 CEP170Q5SW79 1584 aa36.83■■■■□ 3.49
SMIM19-203ENST00000417410 ARHGEF11O15085 1522 aa36.75■■■■□ 3.47
SMIM19-203ENST00000417410 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
SMIM19-203ENST00000417410 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
SMIM19-203ENST00000417410 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
SMIM19-203ENST00000417410 EEA1Q15075 1411 aa36.7■■■■□ 3.47
SMIM19-203ENST00000417410 RAPGEF2Q9Y4G8 1499 aa36.69■■■■□ 3.46
SMIM19-203ENST00000417410 CSRNP3Q8WYN3 585 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms