RNA–Protein interactions for RNA: ENST00000310942.8

CBX2-202, Transcript of chromobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX2, Length 4,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-202ENST00000310942 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
CBX2-202ENST00000310942 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
CBX2-202ENST00000310942 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
CBX2-202ENST00000310942 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
CBX2-202ENST00000310942 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
CBX2-202ENST00000310942 PCGF6Q9BYE7 350 aa29.69■■■□□ 2.34
CBX2-202ENST00000310942 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
CBX2-202ENST00000310942 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
CBX2-202ENST00000310942 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
CBX2-202ENST00000310942 HRCP23327 699 aa28.92■■■□□ 2.22
CBX2-202ENST00000310942 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
CBX2-202ENST00000310942 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
CBX2-202ENST00000310942 PPARGC1BQ86YN6 1023 aaKnown RBP28.7■■■□□ 2.19
CBX2-202ENST00000310942 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.16
CBX2-202ENST00000310942 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
CBX2-202ENST00000310942 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
CBX2-202ENST00000310942 CCER1Q8TC90 406 aaPredicted RBP28.21■■■□□ 2.11
CBX2-202ENST00000310942 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.11
CBX2-202ENST00000310942 RANGAP1P46060 587 aaPredicted RBP28.11■■■□□ 2.09
CBX2-202ENST00000310942 UBTFP17480 764 aaKnown RBP28.02■■■□□ 2.08
CBX2-202ENST00000310942 APLP2Q06481 763 aa27.96■■■□□ 2.07
CBX2-202ENST00000310942 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
CBX2-202ENST00000310942 ABCC9O60706 1549 aa27.88■■■□□ 2.05
CBX2-202ENST00000310942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
CBX2-202ENST00000310942 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
CBX2-202ENST00000310942 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
CBX2-202ENST00000310942 CENPBP07199 599 aaPredicted RBP27.58■■■□□ 2.01
CBX2-202ENST00000310942 YTHDC1Q96MU7 727 aaKnown RBP27.55■■■□□ 2
CBX2-202ENST00000310942 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
CBX2-202ENST00000310942 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
CBX2-202ENST00000310942 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
CBX2-202ENST00000310942 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
CBX2-202ENST00000310942 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
CBX2-202ENST00000310942 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
CBX2-202ENST00000310942 ITGAEP38570 1179 aa27.1■■□□□ 1.93
CBX2-202ENST00000310942 CSRNP3Q8WYN3 585 aa27.02■■□□□ 1.92
CBX2-202ENST00000310942 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
CBX2-202ENST00000310942 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
CBX2-202ENST00000310942 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
CBX2-202ENST00000310942 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
CBX2-202ENST00000310942 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
CBX2-202ENST00000310942 ZNF316A6NFI3 1004 aaPredicted RBP26.74■■□□□ 1.87
CBX2-202ENST00000310942 NEUROD1Q13562 356 aa26.64■■□□□ 1.86
CBX2-202ENST00000310942 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
CBX2-202ENST00000310942 NACADO15069 1562 aa26.55■■□□□ 1.84
CBX2-202ENST00000310942 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
CBX2-202ENST00000310942 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
CBX2-202ENST00000310942 SOGA1O94964 1423 aa26.39■■□□□ 1.82
CBX2-202ENST00000310942 NEFLP07196 543 aa26.33■■□□□ 1.81
CBX2-202ENST00000310942 WIZO95785 1651 aa26.33■■□□□ 1.81
CBX2-202ENST00000310942 P3H3Q8IVL6 736 aa26.32■■□□□ 1.8
CBX2-202ENST00000310942 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
CBX2-202ENST00000310942 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
CBX2-202ENST00000310942 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
CBX2-202ENST00000310942 MIER1Q8N108 512 aa26.29■■□□□ 1.8
CBX2-202ENST00000310942 CLIP1P30622 1438 aa26.28■■□□□ 1.8
CBX2-202ENST00000310942 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
CBX2-202ENST00000310942 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
CBX2-202ENST00000310942 GOLGA3Q08378 1498 aa26.21■■□□□ 1.79
CBX2-202ENST00000310942 EEA1Q15075 1411 aa26.15■■□□□ 1.78
CBX2-202ENST00000310942 BCANQ96GW7 911 aa26.15■■□□□ 1.78
CBX2-202ENST00000310942 CNGB1Q14028 1251 aaPredicted RBP26.11■■□□□ 1.77
CBX2-202ENST00000310942 MYT1Q01538 1121 aa26.02■■□□□ 1.76
CBX2-202ENST00000310942 POLR3GLQ9BT43 218 aa26■■□□□ 1.75
CBX2-202ENST00000310942 RUSC2Q8N2Y8 1516 aa25.97■■□□□ 1.75
CBX2-202ENST00000310942 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
CBX2-202ENST00000310942 ERICH6Q7L0X2 663 aa25.97■■□□□ 1.75
CBX2-202ENST00000310942 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
CBX2-202ENST00000310942 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
CBX2-202ENST00000310942 ARID3CA6NKF2 412 aa25.89■■□□□ 1.73
CBX2-202ENST00000310942 DDX10Q13206 875 aaKnown RBP25.88■■□□□ 1.73
CBX2-202ENST00000310942 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
CBX2-202ENST00000310942 HIRIP3Q9BW71 556 aaPredicted RBP25.84■■□□□ 1.73
CBX2-202ENST00000310942 ANP32CO43423 234 aa25.82■■□□□ 1.72
CBX2-202ENST00000310942 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
CBX2-202ENST00000310942 VPS8Q8N3P4 1428 aa25.72■■□□□ 1.71
CBX2-202ENST00000310942 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
CBX2-202ENST00000310942 FKBP8Q14318 412 aa25.66■■□□□ 1.7
CBX2-202ENST00000310942 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
CBX2-202ENST00000310942 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
CBX2-202ENST00000310942 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
CBX2-202ENST00000310942 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
CBX2-202ENST00000310942 ZNF326Q5BKZ1 582 aaKnown RBP25.59■■□□□ 1.69
CBX2-202ENST00000310942 CHIC2Q9UKJ5 165 aa25.58■■□□□ 1.69
CBX2-202ENST00000310942 TONSLQ96HA7 1378 aa25.57■■□□□ 1.68
CBX2-202ENST00000310942 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
CBX2-202ENST00000310942 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
CBX2-202ENST00000310942 FBLN2P98095 1184 aa25.43■■□□□ 1.66
CBX2-202ENST00000310942 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
CBX2-202ENST00000310942 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
CBX2-202ENST00000310942 HNRNPUQ00839 825 aaKnown RBP eCLIP25.42■■□□□ 1.66
CBX2-202ENST00000310942 CUX2O14529 1486 aa25.38■■□□□ 1.65
CBX2-202ENST00000310942 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
CBX2-202ENST00000310942 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
CBX2-202ENST00000310942 SUPT16HQ9Y5B9 1047 aaKnown RBP25.35■■□□□ 1.65
CBX2-202ENST00000310942 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
CBX2-202ENST00000310942 IRX6P78412 446 aaPredicted RBP25.32■■□□□ 1.64
CBX2-202ENST00000310942 FAM9BQ8IZU0 186 aa25.3■■□□□ 1.64
CBX2-202ENST00000310942 CDK11AQ9UQ88 783 aaPredicted RBP25.29■■□□□ 1.64
CBX2-202ENST00000310942 DHX57Q6P158 1386 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms