RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 DCAF8L2P0C7V8 631 aa32.89■■■□□ 2.86
CHRNA4-207ENST00000615287 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
CHRNA4-207ENST00000615287 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
CHRNA4-207ENST00000615287 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
CHRNA4-207ENST00000615287 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
CHRNA4-207ENST00000615287 APLP2Q06481 763 aa29.23■■■□□ 2.27
CHRNA4-207ENST00000615287 FAM9AQ8IZU1 332 aaPredicted RBP29.19■■■□□ 2.26
CHRNA4-207ENST00000615287 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
CHRNA4-207ENST00000615287 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
CHRNA4-207ENST00000615287 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
CHRNA4-207ENST00000615287 ATP1B4Q9UN42 357 aaPredicted RBP28.43■■■□□ 2.14
CHRNA4-207ENST00000615287 UBTFP17480 764 aaKnown RBP28.23■■■□□ 2.11
CHRNA4-207ENST00000615287 PELP1Q8IZL8 1130 aaKnown RBP28.12■■■□□ 2.09
CHRNA4-207ENST00000615287 PCGF6Q9BYE7 350 aa28.01■■■□□ 2.08
CHRNA4-207ENST00000615287 CCER1Q8TC90 406 aaPredicted RBP27.74■■■□□ 2.03
CHRNA4-207ENST00000615287 ABCC9O60706 1549 aa27.68■■■□□ 2.02
CHRNA4-207ENST00000615287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.6■■■□□ 2.01
CHRNA4-207ENST00000615287 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
CHRNA4-207ENST00000615287 ZEB1P37275 1124 aaPredicted RBP27.57■■■□□ 2
CHRNA4-207ENST00000615287 MYT1LQ9UL68 1186 aa27.56■■■□□ 2
CHRNA4-207ENST00000615287 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
CHRNA4-207ENST00000615287 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
CHRNA4-207ENST00000615287 CENPBP07199 599 aaPredicted RBP27.22■■□□□ 1.95
CHRNA4-207ENST00000615287 ITGAEP38570 1179 aa27.21■■□□□ 1.95
CHRNA4-207ENST00000615287 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
CHRNA4-207ENST00000615287 TRIM26Q12899 539 aaPredicted RBP26.97■■□□□ 1.91
CHRNA4-207ENST00000615287 LOC105371045A0A1W2PR82 267 aa26.93■■□□□ 1.9
CHRNA4-207ENST00000615287 NEFLP07196 543 aa26.89■■□□□ 1.9
CHRNA4-207ENST00000615287 POLR3GLQ9BT43 218 aa26.89■■□□□ 1.89
CHRNA4-207ENST00000615287 ERICH6Q7L0X2 663 aa26.86■■□□□ 1.89
CHRNA4-207ENST00000615287 FBLN2P98095 1184 aa26.79■■□□□ 1.88
CHRNA4-207ENST00000615287 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
CHRNA4-207ENST00000615287 FAM50AQ14320 339 aaKnown RBP26.64■■□□□ 1.85
CHRNA4-207ENST00000615287 SLC4A1APQ9BWU0 796 aaKnown RBP26.58■■□□□ 1.85
CHRNA4-207ENST00000615287 CNGB1Q14028 1251 aaPredicted RBP26.5■■□□□ 1.83
CHRNA4-207ENST00000615287 TRIM52Q96A61 297 aa26.5■■□□□ 1.83
CHRNA4-207ENST00000615287 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
CHRNA4-207ENST00000615287 HRCP23327 699 aa26.29■■□□□ 1.8
CHRNA4-207ENST00000615287 P3H3Q8IVL6 736 aa26.23■■□□□ 1.79
CHRNA4-207ENST00000615287 ARID3CA6NKF2 412 aa26.21■■□□□ 1.79
CHRNA4-207ENST00000615287 NEUROD1Q13562 356 aa26.17■■□□□ 1.78
CHRNA4-207ENST00000615287 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
CHRNA4-207ENST00000615287 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
CHRNA4-207ENST00000615287 DAXXQ9UER7 740 aaPredicted RBP26.09■■□□□ 1.77
CHRNA4-207ENST00000615287 CDK11AQ9UQ88 783 aaPredicted RBP26.07■■□□□ 1.76
CHRNA4-207ENST00000615287 BCANQ96GW7 911 aa26.04■■□□□ 1.76
CHRNA4-207ENST00000615287 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
CHRNA4-207ENST00000615287 ZCCHC6Q5VYS8 1495 aaKnown RBP26.03■■□□□ 1.76
CHRNA4-207ENST00000615287 NPM1P06748 294 aaKnown RBP eCLIP25.99■■□□□ 1.75
CHRNA4-207ENST00000615287 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
CHRNA4-207ENST00000615287 ESF1Q9H501 851 aaKnown RBP25.94■■□□□ 1.74
CHRNA4-207ENST00000615287 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
CHRNA4-207ENST00000615287 DIEXFQ68CQ4 756 aaKnown RBP25.8■■□□□ 1.72
CHRNA4-207ENST00000615287 CLSPNQ9HAW4 1339 aa25.77■■□□□ 1.72
CHRNA4-207ENST00000615287 CHMP7Q8WUX9 453 aaPredicted RBP25.7■■□□□ 1.7
CHRNA4-207ENST00000615287 STAG3Q9UJ98 1225 aa25.69■■□□□ 1.7
CHRNA4-207ENST00000615287 ANP32CO43423 234 aa25.69■■□□□ 1.7
CHRNA4-207ENST00000615287 PLPPR3Q6T4P5 718 aa25.66■■□□□ 1.7
CHRNA4-207ENST00000615287 SLC24A1O60721 1099 aa25.66■■□□□ 1.7
CHRNA4-207ENST00000615287 NEFMP07197 916 aa25.64■■□□□ 1.7
CHRNA4-207ENST00000615287 CHGAP10645 457 aaKnown RBP25.62■■□□□ 1.69
CHRNA4-207ENST00000615287 ZBTB47Q9UFB7 747 aaPredicted RBP25.54■■□□□ 1.68
CHRNA4-207ENST00000615287 NACADO15069 1562 aa25.48■■□□□ 1.67
CHRNA4-207ENST00000615287 ZNF316A6NFI3 1004 aaPredicted RBP25.47■■□□□ 1.67
CHRNA4-207ENST00000615287 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
CHRNA4-207ENST00000615287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.66
CHRNA4-207ENST00000615287 TSPY4P0CV99 314 aa25.41■■□□□ 1.66
CHRNA4-207ENST00000615287 TSPY10P0CW01 314 aa25.41■■□□□ 1.66
CHRNA4-207ENST00000615287 CHIC2Q9UKJ5 165 aa25.38■■□□□ 1.65
CHRNA4-207ENST00000615287 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
CHRNA4-207ENST00000615287 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
CHRNA4-207ENST00000615287 MTUS2Q5JR59 1369 aa25.34■■□□□ 1.65
CHRNA4-207ENST00000615287 KCNH8Q96L42 1107 aa25.26■■□□□ 1.63
CHRNA4-207ENST00000615287 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
CHRNA4-207ENST00000615287 BCL11AQ9H165 835 aa25.25■■□□□ 1.63
CHRNA4-207ENST00000615287 PLEKHD1A6NEE1 506 aa25.2■■□□□ 1.63
CHRNA4-207ENST00000615287 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
CHRNA4-207ENST00000615287 RTL5Q5HYW3 569 aaPredicted RBP25.16■■□□□ 1.62
CHRNA4-207ENST00000615287 CLIP1P30622 1438 aa25.15■■□□□ 1.62
CHRNA4-207ENST00000615287 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
CHRNA4-207ENST00000615287 KDM2AQ9Y2K7 1162 aa25.07■■□□□ 1.6
CHRNA4-207ENST00000615287 EEA1Q15075 1411 aa25.05■■□□□ 1.6
CHRNA4-207ENST00000615287 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
CHRNA4-207ENST00000615287 MYT1Q01538 1121 aa25.04■■□□□ 1.6
CHRNA4-207ENST00000615287 PPP1R15AO75807 674 aaPredicted RBP25.03■■□□□ 1.6
CHRNA4-207ENST00000615287 ARID4BQ4LE39 1312 aaPredicted RBP25.02■■□□□ 1.6
CHRNA4-207ENST00000615287 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
CHRNA4-207ENST00000615287 GOLGA3Q08378 1498 aa24.99■■□□□ 1.59
CHRNA4-207ENST00000615287 RRP7BPQ9NSQ0 103 aa24.98■■□□□ 1.59
CHRNA4-207ENST00000615287 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
CHRNA4-207ENST00000615287 BAZ1AQ9NRL2 1556 aaPredicted RBP24.95■■□□□ 1.59
CHRNA4-207ENST00000615287 CFDP1Q9UEE9 299 aaPredicted RBP24.92■■□□□ 1.58
CHRNA4-207ENST00000615287 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
CHRNA4-207ENST00000615287 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.57
CHRNA4-207ENST00000615287 DDX10Q13206 875 aaKnown RBP24.88■■□□□ 1.57
CHRNA4-207ENST00000615287 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
CHRNA4-207ENST00000615287 FAM9BQ8IZU0 186 aa24.84■■□□□ 1.57
CHRNA4-207ENST00000615287 TMC1Q8TDI8 760 aa24.83■■□□□ 1.57
CHRNA4-207ENST00000615287 WDR43Q15061 677 aaKnown RBP eCLIP24.82■■□□□ 1.56
CHRNA4-207ENST00000615287 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms