RNA–Protein interactions for RNA: ENST00000329841.9

ALDH1A3-201, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALDH1A3, Length 3,924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-201ENST00000329841 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
ALDH1A3-201ENST00000329841 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
ALDH1A3-201ENST00000329841 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
ALDH1A3-201ENST00000329841 SUPT5HO00267 1087 aaKnown RBP29.68■■■□□ 2.34
ALDH1A3-201ENST00000329841 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
ALDH1A3-201ENST00000329841 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
ALDH1A3-201ENST00000329841 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
ALDH1A3-201ENST00000329841 PPARGC1BQ86YN6 1023 aaKnown RBP28.59■■■□□ 2.17
ALDH1A3-201ENST00000329841 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
ALDH1A3-201ENST00000329841 ABCC9O60706 1549 aa28.31■■■□□ 2.12
ALDH1A3-201ENST00000329841 HRCP23327 699 aa28.18■■■□□ 2.1
ALDH1A3-201ENST00000329841 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
ALDH1A3-201ENST00000329841 TTBK1Q5TCY1 1321 aaPredicted RBP28.02■■■□□ 2.08
ALDH1A3-201ENST00000329841 FAM9AQ8IZU1 332 aaPredicted RBP28■■■□□ 2.07
ALDH1A3-201ENST00000329841 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
ALDH1A3-201ENST00000329841 LOC105371045A0A1W2PR82 267 aa27.67■■■□□ 2.02
ALDH1A3-201ENST00000329841 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
ALDH1A3-201ENST00000329841 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
ALDH1A3-201ENST00000329841 SCRIBQ14160 1630 aa27.59■■■□□ 2.01
ALDH1A3-201ENST00000329841 YTHDC1Q96MU7 727 aaKnown RBP27.58■■■□□ 2
ALDH1A3-201ENST00000329841 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
ALDH1A3-201ENST00000329841 PABPN1Q86U42 306 aaKnown RBP eCLIP27.32■■□□□ 1.96
ALDH1A3-201ENST00000329841 CCER1Q8TC90 406 aaPredicted RBP27.27■■□□□ 1.96
ALDH1A3-201ENST00000329841 NACADO15069 1562 aa27.26■■□□□ 1.95
ALDH1A3-201ENST00000329841 CENPBP07199 599 aaPredicted RBP27.17■■□□□ 1.94
ALDH1A3-201ENST00000329841 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
ALDH1A3-201ENST00000329841 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
ALDH1A3-201ENST00000329841 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
ALDH1A3-201ENST00000329841 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
ALDH1A3-201ENST00000329841 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
ALDH1A3-201ENST00000329841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
ALDH1A3-201ENST00000329841 RANGAP1P46060 587 aaPredicted RBP26.84■■□□□ 1.89
ALDH1A3-201ENST00000329841 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
ALDH1A3-201ENST00000329841 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
ALDH1A3-201ENST00000329841 MYT1Q01538 1121 aa26.59■■□□□ 1.85
ALDH1A3-201ENST00000329841 DIEXFQ68CQ4 756 aaKnown RBP26.55■■□□□ 1.84
ALDH1A3-201ENST00000329841 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
ALDH1A3-201ENST00000329841 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
ALDH1A3-201ENST00000329841 NEUROD1Q13562 356 aa26.45■■□□□ 1.83
ALDH1A3-201ENST00000329841 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
ALDH1A3-201ENST00000329841 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.82
ALDH1A3-201ENST00000329841 APLP2Q06481 763 aa26.28■■□□□ 1.8
ALDH1A3-201ENST00000329841 HNRNPUL2Q1KMD3 747 aaKnown RBP26.24■■□□□ 1.79
ALDH1A3-201ENST00000329841 ERICH6Q7L0X2 663 aa26.22■■□□□ 1.79
ALDH1A3-201ENST00000329841 BCANQ96GW7 911 aa26.21■■□□□ 1.79
ALDH1A3-201ENST00000329841 WIZO95785 1651 aa26.17■■□□□ 1.78
ALDH1A3-201ENST00000329841 BAZ1BQ9UIG0 1483 aaKnown RBP26.01■■□□□ 1.75
ALDH1A3-201ENST00000329841 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
ALDH1A3-201ENST00000329841 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.75
ALDH1A3-201ENST00000329841 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
ALDH1A3-201ENST00000329841 ITGAEP38570 1179 aa25.91■■□□□ 1.74
ALDH1A3-201ENST00000329841 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.74
ALDH1A3-201ENST00000329841 NEFLP07196 543 aa25.83■■□□□ 1.73
ALDH1A3-201ENST00000329841 CNGB1Q14028 1251 aaPredicted RBP25.78■■□□□ 1.72
ALDH1A3-201ENST00000329841 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
ALDH1A3-201ENST00000329841 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
ALDH1A3-201ENST00000329841 ATP1B4Q9UN42 357 aaPredicted RBP25.73■■□□□ 1.71
ALDH1A3-201ENST00000329841 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
ALDH1A3-201ENST00000329841 ABCC8Q09428 1581 aa25.68■■□□□ 1.7
ALDH1A3-201ENST00000329841 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
ALDH1A3-201ENST00000329841 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
ALDH1A3-201ENST00000329841 MIER1Q8N108 512 aa25.56■■□□□ 1.68
ALDH1A3-201ENST00000329841 EEA1Q15075 1411 aa25.55■■□□□ 1.68
ALDH1A3-201ENST00000329841 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
ALDH1A3-201ENST00000329841 SOGA1O94964 1423 aa25.51■■□□□ 1.67
ALDH1A3-201ENST00000329841 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
ALDH1A3-201ENST00000329841 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
ALDH1A3-201ENST00000329841 GOLGA3Q08378 1498 aa25.37■■□□□ 1.65
ALDH1A3-201ENST00000329841 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
ALDH1A3-201ENST00000329841 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
ALDH1A3-201ENST00000329841 FKBP8Q14318 412 aa25.26■■□□□ 1.63
ALDH1A3-201ENST00000329841 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
ALDH1A3-201ENST00000329841 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
ALDH1A3-201ENST00000329841 CLIP1P30622 1438 aa25.24■■□□□ 1.63
ALDH1A3-201ENST00000329841 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
ALDH1A3-201ENST00000329841 KIF27Q86VH2 1401 aa25.2■■□□□ 1.63
ALDH1A3-201ENST00000329841 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
ALDH1A3-201ENST00000329841 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
ALDH1A3-201ENST00000329841 BCL11AQ9H165 835 aa25.11■■□□□ 1.61
ALDH1A3-201ENST00000329841 TRIM52Q96A61 297 aa25.09■■□□□ 1.61
ALDH1A3-201ENST00000329841 IRX6P78412 446 aaPredicted RBP25.07■■□□□ 1.6
ALDH1A3-201ENST00000329841 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
ALDH1A3-201ENST00000329841 HIRIP3Q9BW71 556 aaPredicted RBP25.04■■□□□ 1.6
ALDH1A3-201ENST00000329841 CUX2O14529 1486 aa25.02■■□□□ 1.6
ALDH1A3-201ENST00000329841 HMGXB3Q12766 1538 aa25■■□□□ 1.59
ALDH1A3-201ENST00000329841 ANP32EQ9BTT0 268 aa24.97■■□□□ 1.59
ALDH1A3-201ENST00000329841 NBR1Q14596 966 aa24.96■■□□□ 1.59
ALDH1A3-201ENST00000329841 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
ALDH1A3-201ENST00000329841 FBLN2P98095 1184 aa24.93■■□□□ 1.58
ALDH1A3-201ENST00000329841 DDX10Q13206 875 aaKnown RBP24.92■■□□□ 1.58
ALDH1A3-201ENST00000329841 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
ALDH1A3-201ENST00000329841 RAPGEF2Q9Y4G8 1499 aa24.88■■□□□ 1.57
ALDH1A3-201ENST00000329841 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
ALDH1A3-201ENST00000329841 CFTRP13569 1480 aa24.87■■□□□ 1.57
ALDH1A3-201ENST00000329841 SENP3-EIF4A1A0A087X0R7 540 aa24.86■■□□□ 1.57
ALDH1A3-201ENST00000329841 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
ALDH1A3-201ENST00000329841 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
ALDH1A3-201ENST00000329841 SUPT16HQ9Y5B9 1047 aaKnown RBP24.86■■□□□ 1.57
ALDH1A3-201ENST00000329841 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
ALDH1A3-201ENST00000329841 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms