RNA–Protein interactions for RNA: ENST00000252575.10

NCAN-201, Transcript of neurocan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCAN, Length 6,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-201ENST00000252575 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
NCAN-201ENST00000252575 SUPT5HO00267 1087 aaKnown RBP29.58■■■□□ 2.33
NCAN-201ENST00000252575 EHMT2Q96KQ7 1210 aa29.44■■■□□ 2.3
NCAN-201ENST00000252575 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
NCAN-201ENST00000252575 TTBK1Q5TCY1 1321 aaPredicted RBP28.35■■■□□ 2.13
NCAN-201ENST00000252575 APLP2Q06481 763 aa28.33■■■□□ 2.13
NCAN-201ENST00000252575 NISCHQ9Y2I1 1504 aa28.17■■■□□ 2.1
NCAN-201ENST00000252575 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
NCAN-201ENST00000252575 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
NCAN-201ENST00000252575 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
NCAN-201ENST00000252575 ATP1B4Q9UN42 357 aaPredicted RBP27.84■■■□□ 2.05
NCAN-201ENST00000252575 PCGF6Q9BYE7 350 aa27.59■■■□□ 2.01
NCAN-201ENST00000252575 ERICH6Q7L0X2 663 aa27.31■■□□□ 1.96
NCAN-201ENST00000252575 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
NCAN-201ENST00000252575 CCER1Q8TC90 406 aaPredicted RBP27.16■■□□□ 1.94
NCAN-201ENST00000252575 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
NCAN-201ENST00000252575 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
NCAN-201ENST00000252575 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
NCAN-201ENST00000252575 YTHDC1Q96MU7 727 aaKnown RBP26.91■■□□□ 1.9
NCAN-201ENST00000252575 CENPBP07199 599 aaPredicted RBP26.88■■□□□ 1.89
NCAN-201ENST00000252575 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
NCAN-201ENST00000252575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
NCAN-201ENST00000252575 HNRNPUL2Q1KMD3 747 aaKnown RBP26.75■■□□□ 1.87
NCAN-201ENST00000252575 POLR3GLQ9BT43 218 aa26.72■■□□□ 1.87
NCAN-201ENST00000252575 NEFLP07196 543 aa26.68■■□□□ 1.86
NCAN-201ENST00000252575 ITGAEP38570 1179 aa26.63■■□□□ 1.85
NCAN-201ENST00000252575 CNGB1Q14028 1251 aaPredicted RBP26.6■■□□□ 1.85
NCAN-201ENST00000252575 ZEB1P37275 1124 aaPredicted RBP26.59■■□□□ 1.85
NCAN-201ENST00000252575 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
NCAN-201ENST00000252575 MYT1Q01538 1121 aa26.19■■□□□ 1.78
NCAN-201ENST00000252575 DAXXQ9UER7 740 aaPredicted RBP26.18■■□□□ 1.78
NCAN-201ENST00000252575 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
NCAN-201ENST00000252575 TRIM26Q12899 539 aaPredicted RBP25.87■■□□□ 1.73
NCAN-201ENST00000252575 FAM50AQ14320 339 aaKnown RBP25.75■■□□□ 1.71
NCAN-201ENST00000252575 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
NCAN-201ENST00000252575 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
NCAN-201ENST00000252575 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
NCAN-201ENST00000252575 FBLN2P98095 1184 aa25.63■■□□□ 1.69
NCAN-201ENST00000252575 HRCP23327 699 aa25.62■■□□□ 1.69
NCAN-201ENST00000252575 SLC24A1O60721 1099 aa25.61■■□□□ 1.69
NCAN-201ENST00000252575 BCL11AQ9H165 835 aa25.58■■□□□ 1.69
NCAN-201ENST00000252575 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
NCAN-201ENST00000252575 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
NCAN-201ENST00000252575 NEUROD1Q13562 356 aa25.55■■□□□ 1.68
NCAN-201ENST00000252575 BCANQ96GW7 911 aa25.5■■□□□ 1.67
NCAN-201ENST00000252575 ARID3CA6NKF2 412 aa25.4■■□□□ 1.66
NCAN-201ENST00000252575 ABCC9O60706 1549 aa25.33■■□□□ 1.65
NCAN-201ENST00000252575 PLPPR3Q6T4P5 718 aa25.33■■□□□ 1.65
NCAN-201ENST00000252575 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
NCAN-201ENST00000252575 ZBTB47Q9UFB7 747 aaPredicted RBP25.24■■□□□ 1.63
NCAN-201ENST00000252575 DIEXFQ68CQ4 756 aaKnown RBP25.2■■□□□ 1.62
NCAN-201ENST00000252575 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
NCAN-201ENST00000252575 CANXP27824 592 aaKnown RBP25.11■■□□□ 1.61
NCAN-201ENST00000252575 ZNF777Q9ULD5 760 aaPredicted RBP25.07■■□□□ 1.6
NCAN-201ENST00000252575 ANP32CO43423 234 aa24.99■■□□□ 1.59
NCAN-201ENST00000252575 NEFMP07197 916 aa24.97■■□□□ 1.59
NCAN-201ENST00000252575 ESF1Q9H501 851 aaKnown RBP24.93■■□□□ 1.58
NCAN-201ENST00000252575 CHGAP10645 457 aaKnown RBP24.9■■□□□ 1.58
NCAN-201ENST00000252575 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
NCAN-201ENST00000252575 CDK11AQ9UQ88 783 aaPredicted RBP24.76■■□□□ 1.55
NCAN-201ENST00000252575 SCAF1Q9H7N4 1312 aaKnown RBP24.68■■□□□ 1.54
NCAN-201ENST00000252575 NPM2Q86SE8 214 aaKnown RBP24.66■■□□□ 1.54
NCAN-201ENST00000252575 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
NCAN-201ENST00000252575 GTF3C3Q9Y5Q9 886 aa24.64■■□□□ 1.54
NCAN-201ENST00000252575 PLEKHG5O94827 1062 aa24.63■■□□□ 1.53
NCAN-201ENST00000252575 A0A0G2JS52 829 aa24.62■■□□□ 1.53
NCAN-201ENST00000252575 NPM1P06748 294 aaKnown RBP eCLIP24.57■■□□□ 1.52
NCAN-201ENST00000252575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
NCAN-201ENST00000252575 SALL2Q9Y467 1007 aaPredicted RBP24.55■■□□□ 1.52
NCAN-201ENST00000252575 ZBTB7CA1YPR0 619 aa24.47■■□□□ 1.51
NCAN-201ENST00000252575 HSP90AA1P07900 732 aaKnown RBP24.4■■□□□ 1.5
NCAN-201ENST00000252575 CHIC2Q9UKJ5 165 aa24.4■■□□□ 1.5
NCAN-201ENST00000252575 ANP32AP39687 249 aaKnown RBP24.37■■□□□ 1.49
NCAN-201ENST00000252575 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
NCAN-201ENST00000252575 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
NCAN-201ENST00000252575 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
NCAN-201ENST00000252575 C14orf37Q86TY3 774 aa24.29■■□□□ 1.48
NCAN-201ENST00000252575 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
NCAN-201ENST00000252575 HNRNPUQ00839 825 aaKnown RBP eCLIP24.2■■□□□ 1.47
NCAN-201ENST00000252575 FKBP8Q14318 412 aa24.2■■□□□ 1.46
NCAN-201ENST00000252575 DDX10Q13206 875 aaKnown RBP24.18■■□□□ 1.46
NCAN-201ENST00000252575 ARXQ96QS3 562 aa24.17■■□□□ 1.46
NCAN-201ENST00000252575 ANP32BQ92688 251 aaKnown RBP24.16■■□□□ 1.46
NCAN-201ENST00000252575 UPF2Q9HAU5 1272 aaKnown RBP24.13■■□□□ 1.45
NCAN-201ENST00000252575 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
NCAN-201ENST00000252575 KCNH8Q96L42 1107 aa24.11■■□□□ 1.45
NCAN-201ENST00000252575 WDR43Q15061 677 aaKnown RBP eCLIP24.11■■□□□ 1.45
NCAN-201ENST00000252575 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
NCAN-201ENST00000252575 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
NCAN-201ENST00000252575 PPP1R15AO75807 674 aaPredicted RBP24.07■■□□□ 1.44
NCAN-201ENST00000252575 HAP1P54257 671 aaPredicted RBP24.05■■□□□ 1.44
NCAN-201ENST00000252575 ARID4BQ4LE39 1312 aaPredicted RBP24.04■■□□□ 1.44
NCAN-201ENST00000252575 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
NCAN-201ENST00000252575 TSPY4P0CV99 314 aa24.03■■□□□ 1.44
NCAN-201ENST00000252575 TSPY10P0CW01 314 aa24.03■■□□□ 1.44
NCAN-201ENST00000252575 EIF5BO60841 1220 aaKnown RBP24.01■■□□□ 1.43
NCAN-201ENST00000252575 SENP3-EIF4A1A0A087X0R7 540 aa23.96■■□□□ 1.43
NCAN-201ENST00000252575 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
NCAN-201ENST00000252575 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.96■■□□□ 1.43
NCAN-201ENST00000252575 IRX6P78412 446 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms