Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRWD1Q9NSI6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.19■■■□□ 2.1
BRWD1Q9NSI6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRWD1Q9NSI6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.17■■■□□ 2.1
BRWD1Q9NSI6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.17■■■□□ 2.1
BRWD1Q9NSI6 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.15■■■□□ 2.1
BRWD1Q9NSI6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
BRWD1Q9NSI6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BRWD1Q9NSI6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
BRWD1Q9NSI6 RNF126P1-201ENST00000567452 1320 ntBASIC28.13■■■□□ 2.09
BRWD1Q9NSI6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD1Q9NSI6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
BRWD1Q9NSI6 GPX1-201ENST00000419349 1106 ntBASIC28.12■■■□□ 2.09
BRWD1Q9NSI6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
BRWD1Q9NSI6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
BRWD1Q9NSI6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BRWD1Q9NSI6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.09■■■□□ 2.09
BRWD1Q9NSI6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.09■■■□□ 2.09
BRWD1Q9NSI6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
BRWD1Q9NSI6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.08■■■□□ 2.09
BRWD1Q9NSI6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.08■■■□□ 2.09
BRWD1Q9NSI6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
BRWD1Q9NSI6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
BRWD1Q9NSI6 NTF6A-201ENST00000591175 560 ntBASIC28.06■■■□□ 2.08
BRWD1Q9NSI6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.04■■■□□ 2.08
BRWD1Q9NSI6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
BRWD1Q9NSI6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
BRWD1Q9NSI6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
BRWD1Q9NSI6 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.03■■■□□ 2.08
BRWD1Q9NSI6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
BRWD1Q9NSI6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
BRWD1Q9NSI6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
BRWD1Q9NSI6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 AC012354.3-201ENST00000623734 483 ntBASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
BRWD1Q9NSI6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
BRWD1Q9NSI6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
BRWD1Q9NSI6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
BRWD1Q9NSI6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.01■■■□□ 2.07
BRWD1Q9NSI6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28■■■□□ 2.07
BRWD1Q9NSI6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
BRWD1Q9NSI6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
BRWD1Q9NSI6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.98■■■□□ 2.07
BRWD1Q9NSI6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
BRWD1Q9NSI6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.97■■■□□ 2.07
BRWD1Q9NSI6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
BRWD1Q9NSI6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
BRWD1Q9NSI6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
BRWD1Q9NSI6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
BRWD1Q9NSI6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
BRWD1Q9NSI6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
BRWD1Q9NSI6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.96■■■□□ 2.07
BRWD1Q9NSI6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
BRWD1Q9NSI6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.95■■■□□ 2.07
BRWD1Q9NSI6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
BRWD1Q9NSI6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.93■■■□□ 2.06
BRWD1Q9NSI6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.92■■■□□ 2.06
BRWD1Q9NSI6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.92■■■□□ 2.06
BRWD1Q9NSI6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.9■■■□□ 2.06
BRWD1Q9NSI6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.89■■■□□ 2.05
BRWD1Q9NSI6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
BRWD1Q9NSI6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.88■■■□□ 2.05
BRWD1Q9NSI6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.86■■■□□ 2.05
BRWD1Q9NSI6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
BRWD1Q9NSI6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
BRWD1Q9NSI6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
BRWD1Q9NSI6 AC018358.1-201ENST00000631079 1402 ntBASIC27.85■■■□□ 2.05
BRWD1Q9NSI6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
BRWD1Q9NSI6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
BRWD1Q9NSI6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
BRWD1Q9NSI6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
BRWD1Q9NSI6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.83■■■□□ 2.05
BRWD1Q9NSI6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.82■■■□□ 2.04
BRWD1Q9NSI6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
BRWD1Q9NSI6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
BRWD1Q9NSI6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.8■■■□□ 2.04
BRWD1Q9NSI6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
BRWD1Q9NSI6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
BRWD1Q9NSI6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.8■■■□□ 2.04
BRWD1Q9NSI6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
BRWD1Q9NSI6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.8■■■□□ 2.04
BRWD1Q9NSI6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.79■■■□□ 2.04
BRWD1Q9NSI6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
BRWD1Q9NSI6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.79■■■□□ 2.04
BRWD1Q9NSI6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.78■■■□□ 2.04
BRWD1Q9NSI6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.78■■■□□ 2.04
BRWD1Q9NSI6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
BRWD1Q9NSI6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.76■■■□□ 2.03
BRWD1Q9NSI6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BRWD1Q9NSI6 AC008813.1-201ENST00000536597 885 ntBASIC27.75■■■□□ 2.03
BRWD1Q9NSI6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.75■■■□□ 2.03
BRWD1Q9NSI6 AL033527.3-201ENST00000566366 1196 ntBASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms