RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 NISCHQ9Y2I1 1504 aa61.43■■■■■ 7.42
AC005540.1-201ENST00000413911 ABCC9O60706 1549 aa55.24■■■■■ 6.43
AC005540.1-201ENST00000413911 CCDC180Q9P1Z9 1646 aa55.06■■■■■ 6.41
AC005540.1-201ENST00000413911 RB1CC1Q8TDY2 1594 aa52.45■■■■■ 5.99
AC005540.1-201ENST00000413911 NACADO15069 1562 aa52.09■■■■■ 5.93
AC005540.1-201ENST00000413911 DNAJC5BQ9UF47 199 aa52■■■■■ 5.91
AC005540.1-201ENST00000413911 DCAF8L2P0C7V8 631 aa51.87■■■■■ 5.89
AC005540.1-201ENST00000413911 PABPN1Q86U42 306 aaKnown RBP eCLIP51.46■■■■■ 5.83
AC005540.1-201ENST00000413911 MYO15BQ96JP2 1530 aa51.35■■■■■ 5.81
AC005540.1-201ENST00000413911 UNC13AQ9UPW8 1703 aa51.34■■■■■ 5.81
AC005540.1-201ENST00000413911 BICRAQ9NZM4 1560 aa51.06■■■■■ 5.76
AC005540.1-201ENST00000413911 ZCCHC6Q5VYS8 1495 aaKnown RBP50.9■■■■■ 5.74
AC005540.1-201ENST00000413911 DCAF1Q9Y4B6 1507 aa50.69■■■■■ 5.71
AC005540.1-201ENST00000413911 SCRIBQ14160 1630 aa50.25■■■■■ 5.63
AC005540.1-201ENST00000413911 SHROOM4Q9ULL8 1493 aa50.2■■■■■ 5.63
AC005540.1-201ENST00000413911 CC2D2AQ9P2K1 1620 aa49.87■■■■■ 5.57
AC005540.1-201ENST00000413911 EIF4G1Q04637 1599 aaKnown RBP49.75■■■■■ 5.55
AC005540.1-201ENST00000413911 CECR2Q9BXF3 1484 aa49.74■■■■■ 5.55
AC005540.1-201ENST00000413911 NCAPD3P42695 1498 aa48.15■■■■■ 5.3
AC005540.1-201ENST00000413911 ATAD2BQ9ULI0 1458 aa48.01■■■■■ 5.28
AC005540.1-201ENST00000413911 SMARCA4P51532 1647 aa47.92■■■■■ 5.26
AC005540.1-201ENST00000413911 SMARCA2P51531 1590 aa47.79■■■■■ 5.24
AC005540.1-201ENST00000413911 HMGXB3Q12766 1538 aa47.74■■■■■ 5.23
AC005540.1-201ENST00000413911 DNAJC5Q9H3Z4 198 aa47.68■■■■■ 5.22
AC005540.1-201ENST00000413911 BAZ1AQ9NRL2 1556 aaPredicted RBP47.62■■■■■ 5.21
AC005540.1-201ENST00000413911 ERCC6Q03468 1493 aa47.61■■■■■ 5.21
AC005540.1-201ENST00000413911 CUX2O14529 1486 aa47.55■■■■■ 5.2
AC005540.1-201ENST00000413911 BAZ1BQ9UIG0 1483 aaKnown RBP47.48■■■■■ 5.19
AC005540.1-201ENST00000413911 NESP48681 1621 aa47.48■■■■■ 5.19
AC005540.1-201ENST00000413911 PEG3Q9GZU2 1588 aa47.45■■■■■ 5.19
AC005540.1-201ENST00000413911 MROH2BQ7Z745 1585 aa47.37■■■■■ 5.17
AC005540.1-201ENST00000413911 LAMC3Q9Y6N6 1575 aa47.01■■■■■ 5.12
AC005540.1-201ENST00000413911 THOC2Q8NI27 1593 aaKnown RBP46.94■■■■■ 5.11
AC005540.1-201ENST00000413911 KIF21AQ7Z4S6 1674 aa46.79■■■■■ 5.08
AC005540.1-201ENST00000413911 WIZO95785 1651 aa46.78■■■■■ 5.08
AC005540.1-201ENST00000413911 PDS5BQ9NTI5 1447 aa46.74■■■■■ 5.07
AC005540.1-201ENST00000413911 CADPSQ9ULU8 1353 aa46.68■■■■■ 5.06
AC005540.1-201ENST00000413911 MRC2Q9UBG0 1479 aa46.38■■■■■ 5.01
AC005540.1-201ENST00000413911 RSF1Q96T23 1441 aaPredicted RBP46.37■■■■■ 5.01
AC005540.1-201ENST00000413911 WDR62O43379 1518 aa46.28■■■■■ 5
AC005540.1-201ENST00000413911 CEP164Q9UPV0 1460 aa46.16■■■■■ 4.98
AC005540.1-201ENST00000413911 TOP2AP11388 1531 aaKnown RBP46.14■■■■■ 4.98
AC005540.1-201ENST00000413911 CFTRP13569 1480 aa46.14■■■■■ 4.98
AC005540.1-201ENST00000413911 FANCD2Q9BXW9 1451 aa46.14■■■■■ 4.98
AC005540.1-201ENST00000413911 URB2Q14146 1524 aaKnown RBP45.82■■■■■ 4.92
AC005540.1-201ENST00000413911 CCDC88BA6NC98 1476 aa45.68■■■■■ 4.9
AC005540.1-201ENST00000413911 PRDM2Q13029 1718 aa45.57■■■■■ 4.89
AC005540.1-201ENST00000413911 TRIM41Q8WV44 630 aa45.55■■■■■ 4.88
AC005540.1-201ENST00000413911 OSCARQ8IYS5 282 aa45.4■■■■■ 4.86
AC005540.1-201ENST00000413911 ZNF608Q9ULD9 1512 aaPredicted RBP45.28■■■■■ 4.84
AC005540.1-201ENST00000413911 TOPBP1Q92547 1522 aa45.27■■■■■ 4.84
AC005540.1-201ENST00000413911 IFT140Q96RY7 1462 aa45.25■■■■■ 4.83
AC005540.1-201ENST00000413911 ABCC8Q09428 1581 aa45.07■■■■■ 4.81
AC005540.1-201ENST00000413911 DNMBPQ6XZF7 1577 aa45.07■■■■■ 4.8
AC005540.1-201ENST00000413911 EIF4G3O43432 1585 aaKnown RBP44.95■■■■■ 4.79
AC005540.1-201ENST00000413911 TARBP1Q13395 1621 aaKnown RBP44.89■■■■■ 4.78
AC005540.1-201ENST00000413911 AQRO60306 1485 aaKnown RBP eCLIP44.85■■■■■ 4.77
AC005540.1-201ENST00000413911 RIMBP3CA6NJZ7 1639 aa44.84■■■■■ 4.77
AC005540.1-201ENST00000413911 RIMBP3BA6NNM3 1639 aa44.84■■■■■ 4.77
AC005540.1-201ENST00000413911 RIMBP3Q9UFD9 1639 aa44.84■■■■■ 4.77
AC005540.1-201ENST00000413911 POLA1P09884 1462 aaPredicted RBP44.82■■■■■ 4.77
AC005540.1-201ENST00000413911 RAD54L2Q9Y4B4 1467 aa44.7■■■■■ 4.75
AC005540.1-201ENST00000413911 ARHGEF11O15085 1522 aa44.7■■■■■ 4.75
AC005540.1-201ENST00000413911 CHD1O14646 1710 aa44.63■■■■■ 4.73
AC005540.1-201ENST00000413911 SOGA1O94964 1423 aa44.59■■■■■ 4.73
AC005540.1-201ENST00000413911 TDRD9Q8NDG6 1382 aaKnown RBP44.56■■■■■ 4.72
AC005540.1-201ENST00000413911 FGD5Q6ZNL6 1462 aa44.52■■■■■ 4.72
AC005540.1-201ENST00000413911 FBLN2P98095 1184 aa44.51■■■■■ 4.72
AC005540.1-201ENST00000413911 CUX1P39880 1505 aa44.5■■■■■ 4.71
AC005540.1-201ENST00000413911 CYB5RLQ6IPT4 315 aa44.39■■■■■ 4.7
AC005540.1-201ENST00000413911 SNAPC4Q5SXM2 1469 aa44.34■■■■■ 4.69
AC005540.1-201ENST00000413911 WDR97A6NE52 1622 aa44.31■■■■■ 4.68
AC005540.1-201ENST00000413911 ARAP1Q96P48 1450 aa44.28■■■■■ 4.68
AC005540.1-201ENST00000413911 SUPT5HO00267 1087 aaKnown RBP44.25■■■■■ 4.67
AC005540.1-201ENST00000413911 GRIN2BQ13224 1484 aa44.19■■■■■ 4.66
AC005540.1-201ENST00000413911 MAGI1Q96QZ7 1491 aaPredicted RBP44.18■■■■■ 4.66
AC005540.1-201ENST00000413911 CHMP7Q8WUX9 453 aaPredicted RBP44.15■■■■■ 4.66
AC005540.1-201ENST00000413911 CLASP1Q7Z460 1538 aa44.14■■■■■ 4.66
AC005540.1-201ENST00000413911 SYNJ2O15056 1496 aa44.05■■■■■ 4.64
AC005540.1-201ENST00000413911 GAPVD1Q14C86 1478 aa44.04■■■■■ 4.64
AC005540.1-201ENST00000413911 SYNJ1O43426 1573 aa44.03■■■■■ 4.64
AC005540.1-201ENST00000413911 ABCA10Q8WWZ4 1543 aa44■■■■■ 4.63
AC005540.1-201ENST00000413911 PBRM1Q86U86 1689 aa44■■■■■ 4.63
AC005540.1-201ENST00000413911 ABCA5Q8WWZ7 1642 aa43.95■■■■■ 4.63
AC005540.1-201ENST00000413911 TRHP20396 242 aaPredicted RBP43.86■■■■■ 4.61
AC005540.1-201ENST00000413911 WRNQ14191 1432 aaPredicted RBP eCLIP43.78■■■■■ 4.6
AC005540.1-201ENST00000413911 TOP2BQ02880 1626 aa43.72■■■■■ 4.59
AC005540.1-201ENST00000413911 BIVM-ERCC5R4GMW8 1640 aa43.71■■■■■ 4.59
AC005540.1-201ENST00000413911 GRIN2AQ12879 1464 aa43.64■■■■■ 4.58
AC005540.1-201ENST00000413911 ADAMTS12P58397 1594 aa43.61■■■■■ 4.57
AC005540.1-201ENST00000413911 ERCC6L2Q5T890 1561 aa43.53■■■■■ 4.56
AC005540.1-201ENST00000413911 CEP170Q5SW79 1584 aa43.52■■■■■ 4.56
AC005540.1-201ENST00000413911 NUP160Q12769 1436 aa43.51■■■■■ 4.56
AC005540.1-201ENST00000413911 FHAD1B1AJZ9 1412 aa43.47■■■■■ 4.55
AC005540.1-201ENST00000413911 ERICH3Q5RHP9 1530 aa43.41■■■■■ 4.54
AC005540.1-201ENST00000413911 SHROOM2Q13796 1616 aa43.32■■■■■ 4.53
AC005540.1-201ENST00000413911 PRG4Q92954 1404 aaPredicted RBP43.09■■■■■ 4.49
AC005540.1-201ENST00000413911 JPH4Q96JJ6 628 aa43.07■■■■■ 4.49
AC005540.1-201ENST00000413911 RUSC2Q8N2Y8 1516 aa43■■■■■ 4.47
AC005540.1-201ENST00000413911 IGF1RP08069 1367 aa42.92■■■■■ 4.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms