Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01561Q8N1V8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01561Q8N1V8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.58■□□□□ 0.41
LINC01561Q8N1V8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01561Q8N1V8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01561Q8N1V8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.57■□□□□ 0.4
LINC01561Q8N1V8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01561Q8N1V8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LINC01561Q8N1V8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LINC01561Q8N1V8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01561Q8N1V8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01561Q8N1V8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01561Q8N1V8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LINC01561Q8N1V8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01561Q8N1V8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01561Q8N1V8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 AL133380.1-201ENST00000506013 324 ntBASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01561Q8N1V8 AC010864.1-201ENST00000609407 1511 ntBASIC17.52■□□□□ 0.4
LINC01561Q8N1V8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01561Q8N1V8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
LINC01561Q8N1V8 DRD5P2-201ENST00000421395 2012 ntBASIC17.52■□□□□ 0.39
LINC01561Q8N1V8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LINC01561Q8N1V8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LINC01561Q8N1V8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01561Q8N1V8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01561Q8N1V8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01561Q8N1V8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.51■□□□□ 0.39
LINC01561Q8N1V8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01561Q8N1V8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
LINC01561Q8N1V8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LINC01561Q8N1V8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01561Q8N1V8 AP004833.2-201ENST00000532228 1454 ntBASIC17.49■□□□□ 0.39
LINC01561Q8N1V8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01561Q8N1V8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01561Q8N1V8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC01561Q8N1V8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01561Q8N1V8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
LINC01561Q8N1V8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01561Q8N1V8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LINC01561Q8N1V8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LINC01561Q8N1V8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01561Q8N1V8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01561Q8N1V8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01561Q8N1V8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
LINC01561Q8N1V8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LINC01561Q8N1V8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01561Q8N1V8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01561Q8N1V8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01561Q8N1V8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01561Q8N1V8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01561Q8N1V8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01561Q8N1V8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC01561Q8N1V8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01561Q8N1V8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01561Q8N1V8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01561Q8N1V8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC01561Q8N1V8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01561Q8N1V8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01561Q8N1V8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01561Q8N1V8 AC135731.1-201ENST00000569415 2548 ntBASIC17.39■□□□□ 0.37
LINC01561Q8N1V8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01561Q8N1V8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01561Q8N1V8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01561Q8N1V8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01561Q8N1V8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LINC01561Q8N1V8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
LINC01561Q8N1V8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01561Q8N1V8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01561Q8N1V8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01561Q8N1V8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01561Q8N1V8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01561Q8N1V8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01561Q8N1V8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01561Q8N1V8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01561Q8N1V8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01561Q8N1V8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01561Q8N1V8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01561Q8N1V8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms