Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LINC01561Q8N1V8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.36■■□□□ 1.17
LINC01561Q8N1V8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.19■■□□□ 1.14
LINC01561Q8N1V8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
LINC01561Q8N1V8 AL356512.1-201ENST00000607453 1739 ntBASIC22■■□□□ 1.11
LINC01561Q8N1V8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LINC01561Q8N1V8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.87■■□□□ 1.09
LINC01561Q8N1V8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LINC01561Q8N1V8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01561Q8N1V8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.64■■□□□ 1.05
LINC01561Q8N1V8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01561Q8N1V8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01561Q8N1V8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.44■■□□□ 1.02
LINC01561Q8N1V8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LINC01561Q8N1V8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LINC01561Q8N1V8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LINC01561Q8N1V8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
LINC01561Q8N1V8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC01561Q8N1V8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC01561Q8N1V8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LINC01561Q8N1V8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC01561Q8N1V8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LINC01561Q8N1V8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01561Q8N1V8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01561Q8N1V8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01561Q8N1V8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC01561Q8N1V8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LINC01561Q8N1V8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LINC01561Q8N1V8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LINC01561Q8N1V8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC01561Q8N1V8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01561Q8N1V8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
LINC01561Q8N1V8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.49■□□□□ 0.87
LINC01561Q8N1V8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01561Q8N1V8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
LINC01561Q8N1V8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01561Q8N1V8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01561Q8N1V8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LINC01561Q8N1V8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01561Q8N1V8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC01561Q8N1V8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC01561Q8N1V8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01561Q8N1V8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC01561Q8N1V8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01561Q8N1V8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01561Q8N1V8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01561Q8N1V8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01561Q8N1V8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LINC01561Q8N1V8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01561Q8N1V8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01561Q8N1V8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LINC01561Q8N1V8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20■□□□□ 0.79
LINC01561Q8N1V8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01561Q8N1V8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01561Q8N1V8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01561Q8N1V8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01561Q8N1V8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LINC01561Q8N1V8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01561Q8N1V8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01561Q8N1V8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC01561Q8N1V8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01561Q8N1V8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LINC01561Q8N1V8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LINC01561Q8N1V8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.83■□□□□ 0.76
LINC01561Q8N1V8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC01561Q8N1V8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01561Q8N1V8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01561Q8N1V8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC01561Q8N1V8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.69■□□□□ 0.74
LINC01561Q8N1V8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC01561Q8N1V8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LINC01561Q8N1V8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01561Q8N1V8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LINC01561Q8N1V8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01561Q8N1V8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01561Q8N1V8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01561Q8N1V8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01561Q8N1V8 AC145285.7-201ENST00000614819 1539 ntBASIC19.56■□□□□ 0.72
LINC01561Q8N1V8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01561Q8N1V8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01561Q8N1V8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC01561Q8N1V8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01561Q8N1V8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01561Q8N1V8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
LINC01561Q8N1V8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01561Q8N1V8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01561Q8N1V8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01561Q8N1V8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01561Q8N1V8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01561Q8N1V8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LINC01561Q8N1V8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LINC01561Q8N1V8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01561Q8N1V8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LINC01561Q8N1V8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01561Q8N1V8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LINC01561Q8N1V8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01561Q8N1V8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01561Q8N1V8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01561Q8N1V8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LINC01561Q8N1V8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms