Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144NLQ6NUI1 AC010864.1-201ENST00000609407 1511 ntBASIC21.26■□□□□ 0.99
CCDC144NLQ6NUI1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144NLQ6NUI1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC144NLQ6NUI1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144NLQ6NUI1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144NLQ6NUI1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC144NLQ6NUI1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CCDC144NLQ6NUI1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144NLQ6NUI1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144NLQ6NUI1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144NLQ6NUI1 RPS2P35-201ENST00000443417 897 ntBASIC21.23■□□□□ 0.99
CCDC144NLQ6NUI1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144NLQ6NUI1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144NLQ6NUI1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144NLQ6NUI1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144NLQ6NUI1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144NLQ6NUI1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144NLQ6NUI1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.2■□□□□ 0.99
CCDC144NLQ6NUI1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCDC144NLQ6NUI1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC144NLQ6NUI1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC144NLQ6NUI1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC144NLQ6NUI1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 ST7-AS1-201ENST00000456775 1889 ntBASIC21.18■□□□□ 0.98
CCDC144NLQ6NUI1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144NLQ6NUI1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144NLQ6NUI1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC144NLQ6NUI1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC144NLQ6NUI1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144NLQ6NUI1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144NLQ6NUI1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC144NLQ6NUI1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC144NLQ6NUI1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC144NLQ6NUI1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC144NLQ6NUI1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144NLQ6NUI1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144NLQ6NUI1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144NLQ6NUI1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC144NLQ6NUI1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144NLQ6NUI1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144NLQ6NUI1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC144NLQ6NUI1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC144NLQ6NUI1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144NLQ6NUI1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC144NLQ6NUI1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144NLQ6NUI1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144NLQ6NUI1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC144NLQ6NUI1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144NLQ6NUI1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144NLQ6NUI1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144NLQ6NUI1 MIR6090-201ENST00000622481 60 ntBASIC21.09■□□□□ 0.97
CCDC144NLQ6NUI1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144NLQ6NUI1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144NLQ6NUI1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144NLQ6NUI1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144NLQ6NUI1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144NLQ6NUI1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC144NLQ6NUI1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC144NLQ6NUI1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144NLQ6NUI1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144NLQ6NUI1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144NLQ6NUI1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC144NLQ6NUI1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144NLQ6NUI1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144NLQ6NUI1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144NLQ6NUI1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144NLQ6NUI1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC144NLQ6NUI1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC144NLQ6NUI1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC144NLQ6NUI1 DUX4L29-201ENST00000425409 679 ntBASIC21.02■□□□□ 0.96
CCDC144NLQ6NUI1 ABCB10P1-201ENST00000614297 2181 ntBASIC21.02■□□□□ 0.95
CCDC144NLQ6NUI1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC144NLQ6NUI1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC144NLQ6NUI1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
CCDC144NLQ6NUI1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC144NLQ6NUI1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC144NLQ6NUI1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC144NLQ6NUI1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC144NLQ6NUI1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21■□□□□ 0.95
CCDC144NLQ6NUI1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CCDC144NLQ6NUI1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144NLQ6NUI1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144NLQ6NUI1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144NLQ6NUI1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC144NLQ6NUI1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144NLQ6NUI1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC144NLQ6NUI1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC144NLQ6NUI1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC144NLQ6NUI1 AC127502.1-201ENST00000399971 1502 ntBASIC20.98■□□□□ 0.95
CCDC144NLQ6NUI1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms