Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV25-1A0A075B6N4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV25-1A0A075B6N4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TRBV25-1A0A075B6N4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV25-1A0A075B6N4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV25-1A0A075B6N4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRBV25-1A0A075B6N4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV25-1A0A075B6N4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV25-1A0A075B6N4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TRBV25-1A0A075B6N4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV25-1A0A075B6N4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV25-1A0A075B6N4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV25-1A0A075B6N4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV25-1A0A075B6N4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV25-1A0A075B6N4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV25-1A0A075B6N4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV25-1A0A075B6N4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV25-1A0A075B6N4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV25-1A0A075B6N4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV25-1A0A075B6N4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV25-1A0A075B6N4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV25-1A0A075B6N4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV25-1A0A075B6N4 AL121749.1-202ENST00000609313 2153 ntBASIC18.66■□□□□ 0.58
TRBV25-1A0A075B6N4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV25-1A0A075B6N4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV25-1A0A075B6N4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV25-1A0A075B6N4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRBV25-1A0A075B6N4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV25-1A0A075B6N4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV25-1A0A075B6N4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV25-1A0A075B6N4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRBV25-1A0A075B6N4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV25-1A0A075B6N4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV25-1A0A075B6N4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
TRBV25-1A0A075B6N4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV25-1A0A075B6N4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV25-1A0A075B6N4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV25-1A0A075B6N4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV25-1A0A075B6N4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV25-1A0A075B6N4 ST7-AS1-201ENST00000456775 1889 ntBASIC18.61■□□□□ 0.57
TRBV25-1A0A075B6N4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV25-1A0A075B6N4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV25-1A0A075B6N4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRBV25-1A0A075B6N4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV25-1A0A075B6N4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV25-1A0A075B6N4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRBV25-1A0A075B6N4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV25-1A0A075B6N4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRBV25-1A0A075B6N4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV25-1A0A075B6N4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV25-1A0A075B6N4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV25-1A0A075B6N4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV25-1A0A075B6N4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRBV25-1A0A075B6N4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV25-1A0A075B6N4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV25-1A0A075B6N4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV25-1A0A075B6N4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV25-1A0A075B6N4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRBV25-1A0A075B6N4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.57■□□□□ 0.56
TRBV25-1A0A075B6N4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV25-1A0A075B6N4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV25-1A0A075B6N4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV25-1A0A075B6N4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV25-1A0A075B6N4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRBV25-1A0A075B6N4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.54■□□□□ 0.56
TRBV25-1A0A075B6N4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV25-1A0A075B6N4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV25-1A0A075B6N4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV25-1A0A075B6N4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV25-1A0A075B6N4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV25-1A0A075B6N4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV25-1A0A075B6N4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRBV25-1A0A075B6N4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV25-1A0A075B6N4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms