Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 DDX3X-213ENST00000622198 409 ntTSL 414.35□□□□□ -0.114e-11■■□□□ 14.4
PRPF8Q6P2Q9 CSNK1E-213ENST00000495232 669 ntTSL 210.07□□□□□ -0.82e-11■■□□□ 14.4
PRPF8Q6P2Q9 CSNK1E-202ENST00000366216 1005 ntTSL 210□□□□□ -0.812e-11■■□□□ 14.4
PRPF8Q6P2Q9 KLF6-203ENST00000461124 764 ntTSL 513.07□□□□□ -0.321e-14■■□□□ 14.4
PRPF8Q6P2Q9 ATAD3B-203ENST00000472194 4314 ntTSL 1 (best)10.72□□□□□ -0.695e-9■■□□□ 14.4
PRPF8Q6P2Q9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.282e-16■■□□□ 14.4
PRPF8Q6P2Q9 UXS1-205ENST00000436241 502 ntTSL 410.66□□□□□ -0.73e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.94■□□□□ 0.781e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.33■□□□□ 0.681e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.391e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC10.53□□□□□ -0.721e-6■■□□□ 14.4
PRPF8Q6P2Q9 UBE2G2-203ENST00000462569 762 ntTSL 217.82■□□□□ 0.441e-8■■□□□ 14.4
PRPF8Q6P2Q9 UBE2G2-208ENST00000490450 424 ntTSL 37.26□□□□□ -1.254e-25■■□□□ 14.4
PRPF8Q6P2Q9 MCRS1-208ENST00000548646 608 ntTSL 314.03□□□□□ -0.161e-13■■□□□ 14.4
PRPF8Q6P2Q9 MCRS1-215ENST00000552596 669 ntTSL 211.84□□□□□ -0.511e-13■■□□□ 14.4
PRPF8Q6P2Q9 SLC38A3-203ENST00000439524 424 ntTSL 310.29□□□□□ -0.762e-7■■□□□ 14.4
PRPF8Q6P2Q9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.31■□□□□ 0.521e-8■■□□□ 14.4
PRPF8Q6P2Q9 LRRC45-203ENST00000581227 1145 ntTSL 517.53■□□□□ 0.45e-7■■□□□ 14.4
PRPF8Q6P2Q9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.56□□□□□ -0.081e-8■■□□□ 14.4
PRPF8Q6P2Q9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.441e-8■■□□□ 14.4
PRPF8Q6P2Q9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.481e-8■■□□□ 14.4
PRPF8Q6P2Q9 ELL-205ENST00000608165 452 ntTSL 211.46□□□□□ -0.586e-6■■□□□ 14.4
PRPF8Q6P2Q9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.658e-7■■□□□ 14.4
PRPF8Q6P2Q9 SARS2-209ENST00000598563 506 ntTSL 312.68□□□□□ -0.386e-8■■□□□ 14.4
PRPF8Q6P2Q9 SARS2-214ENST00000602034 498 ntTSL 310.88□□□□□ -0.676e-8■■□□□ 14.4
PRPF8Q6P2Q9 TCF7L2-208ENST00000369389 691 ntTSL 420.36■□□□□ 0.858e-8■■□□□ 14.4
PRPF8Q6P2Q9 TCF7L2-229ENST00000637416 576 ntTSL 41.99□□□□□ -2.098e-8■■□□□ 14.4
PRPF8Q6P2Q9 TCF7L2-225ENST00000636309 563 ntTSL 50.71□□□□□ -2.38e-8■■□□□ 14.4
PRPF8Q6P2Q9 HNRNPM-207ENST00000597081 1004 ntTSL 517.89■□□□□ 0.461e-9■■□□□ 14.4
PRPF8Q6P2Q9 HNRNPM-212ENST00000598999 409 ntTSL 214.38□□□□□ -0.111e-9■■□□□ 14.4
PRPF8Q6P2Q9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.975e-7■■□□□ 14.4
PRPF8Q6P2Q9 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 518.09■□□□□ 0.495e-7■■□□□ 14.4
PRPF8Q6P2Q9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.285e-7■■□□□ 14.4
PRPF8Q6P2Q9 LIME1-210ENST00000621325 2410 ntTSL 216.56■□□□□ 0.245e-7■■□□□ 14.4
PRPF8Q6P2Q9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.235e-7■■□□□ 14.4
PRPF8Q6P2Q9 UBFD1-206ENST00000566669 577 ntTSL 223.91■■□□□ 1.427e-8■■□□□ 14.4
PRPF8Q6P2Q9 VARS-220ENST00000461874 845 ntTSL 516.28■□□□□ 0.23e-7■■□□□ 14.4
PRPF8Q6P2Q9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.288e-14■■□□□ 14.4
PRPF8Q6P2Q9 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.688e-9■■□□□ 14.4
PRPF8Q6P2Q9 PHF5A-202ENST00000459687 504 ntTSL 34.71□□□□□ -1.668e-9■■□□□ 14.4
PRPF8Q6P2Q9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.035e-7■■□□□ 14.4
PRPF8Q6P2Q9 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)9.93□□□□□ -0.822e-10■■□□□ 14.4
PRPF8Q6P2Q9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.375e-7■■□□□ 14.4
PRPF8Q6P2Q9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.292e-14■■□□□ 14.4
PRPF8Q6P2Q9 C16orf72-202ENST00000574285 10359 ntTSL 24.54□□□□□ -1.682e-14■■□□□ 14.4
PRPF8Q6P2Q9 SDCCAG3-203ENST00000371723 865 ntTSL 222.17■■□□□ 1.149e-7■■□□□ 14.4
PRPF8Q6P2Q9 SF3A2-203ENST00000587637 501 ntTSL 214.8□□□□□ -0.042e-13■■□□□ 14.4
PRPF8Q6P2Q9 ZC3H7A-211ENST00000574995 532 ntTSL 422.18■■□□□ 1.148e-9■■□□□ 14.4
PRPF8Q6P2Q9 ZC3H7A-216ENST00000576018 575 ntTSL 413.43□□□□□ -0.268e-9■■□□□ 14.4
PRPF8Q6P2Q9 ZC3H7A-209ENST00000572870 663 ntTSL 48.3□□□□□ -1.088e-9■■□□□ 14.4
PRPF8Q6P2Q9 SMAD2-210ENST00000587421 575 ntTSL 411.97□□□□□ -0.493e-11■■□□□ 14.4
PRPF8Q6P2Q9 RPS8-208ENST00000497035 694 ntTSL 312.29□□□□□ -0.442e-12■■□□□ 14.4
PRPF8Q6P2Q9 SORBS3-216ENST00000523348 680 ntTSL 211.03□□□□□ -0.649e-8■■□□□ 14.4
PRPF8Q6P2Q9 SPTLC3-202ENST00000431275 453 ntTSL 29.16□□□□□ -0.949e-8■■□□□ 14.4
PRPF8Q6P2Q9 SPTLC3-206ENST00000485952 277 ntTSL 33.01□□□□□ -1.939e-8■■□□□ 14.4
PRPF8Q6P2Q9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.066e-7■■□□□ 14.4
PRPF8Q6P2Q9 IRF3-210ENST00000595240 567 ntTSL 213.65□□□□□ -0.224e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.246e-7■■□□□ 14.4
PRPF8Q6P2Q9 NDUFAB1-203ENST00000562133 503 ntTSL 213.08□□□□□ -0.326e-7■■□□□ 14.4
PRPF8Q6P2Q9 NDUFAB1-202ENST00000484769 843 ntTSL 311.24□□□□□ -0.616e-7■■□□□ 14.4
PRPF8Q6P2Q9 PIEZO1-214ENST00000521877 686 ntTSL 215.04■□□□□ -03e-9■■□□□ 14.4
PRPF8Q6P2Q9 PIEZO1-213ENST00000518793 660 ntTSL 310.46□□□□□ -0.743e-9■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.86□□□□□ -0.192e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.76□□□□□ -0.372e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.94□□□□□ -0.52e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC11.82□□□□□ -0.522e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-205ENST00000596962 1237 ntTSL 1 (best)11.74□□□□□ -0.532e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-208ENST00000600283 1414 ntTSL 1 (best)10.79□□□□□ -0.682e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.122e-7■■□□□ 14.4
PRPF8Q6P2Q9 PGS1-213ENST00000589689 1168 ntTSL 214.79□□□□□ -0.041e-6■■□□□ 14.4
PRPF8Q6P2Q9 PGS1-215ENST00000592043 988 ntTSL 1 (best)13.15□□□□□ -0.31e-6■■□□□ 14.4
PRPF8Q6P2Q9 SLC38A5-203ENST00000429543 656 ntTSL 512.27□□□□□ -0.457e-9■■□□□ 14.4
PRPF8Q6P2Q9 SLC38A5-207ENST00000488083 622 ntTSL 311.66□□□□□ -0.547e-9■■□□□ 14.4
PRPF8Q6P2Q9 DKK1-202ENST00000467359 547 ntTSL 29.07□□□□□ -0.961e-6■■□□□ 14.4
PRPF8Q6P2Q9 TMEM259-208ENST00000592052 1637 nt20.46■□□□□ 0.871e-24■■□□□ 14.4
PRPF8Q6P2Q9 ZNF687-202ENST00000336715 4831 ntAPPRIS P1 TSL 1 (best)13.09□□□□□ -0.312e-6■■□□□ 14.4
PRPF8Q6P2Q9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-6■■□□□ 14.4
PRPF8Q6P2Q9 ZNF687-206ENST00000449313 4185 ntTSL 59.85□□□□□ -0.832e-6■■□□□ 14.4
PRPF8Q6P2Q9 ZNF687-203ENST00000426871 3277 ntTSL 29.63□□□□□ -0.872e-6■■□□□ 14.4
PRPF8Q6P2Q9 BRPF3-204ENST00000441730 3329 ntTSL 58.6□□□□□ -1.031e-6■■□□□ 14.4
PRPF8Q6P2Q9 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 210.86□□□□□ -0.677e-7■■□□□ 14.4
PRPF8Q6P2Q9 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC8.86□□□□□ -0.997e-7■■□□□ 14.4
PRPF8Q6P2Q9 ZNF444-212ENST00000593100 562 ntTSL 217.97■□□□□ 0.479e-49■■□□□ 14.4
PRPF8Q6P2Q9 KCMF1-204ENST00000456682 661 ntTSL 322.03■■□□□ 1.128e-10■■□□□ 14.4
PRPF8Q6P2Q9 ALDH7A1-235ENST00000637964 1065 ntTSL 510.54□□□□□ -0.721e-6■■□□□ 14.4
PRPF8Q6P2Q9 ALDH7A1-212ENST00000509459 538 ntTSL 57.62□□□□□ -1.191e-6■■□□□ 14.4
PRPF8Q6P2Q9 RBM39-214ENST00000434927 716 ntTSL 58.17□□□□□ -1.16e-11■■□□□ 14.4
PRPF8Q6P2Q9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.479e-8■■□□□ 14.4
PRPF8Q6P2Q9 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.79e-8■■□□□ 14.4
PRPF8Q6P2Q9 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC10.13□□□□□ -0.799e-8■■□□□ 14.4
PRPF8Q6P2Q9 ERGIC3-206ENST00000416206 1235 ntTSL 59.9□□□□□ -0.829e-8■■□□□ 14.4
PRPF8Q6P2Q9 CDK16-208ENST00000517426 1574 ntTSL 516.28■□□□□ 0.29e-7■■□□□ 14.4
PRPF8Q6P2Q9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.39□□□□□ -0.279e-7■■□□□ 14.4
PRPF8Q6P2Q9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.599e-7■■□□□ 14.4
PRPF8Q6P2Q9 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC10.04□□□□□ -0.89e-7■■□□□ 14.4
PRPF8Q6P2Q9 TMEM2-203ENST00000377055 722 ntTSL 35.75□□□□□ -1.492e-7■■□□□ 14.4
PRPF8Q6P2Q9 TMEM2-201ENST00000377043 675 ntTSL 23.46□□□□□ -1.862e-7■■□□□ 14.4
PRPF8Q6P2Q9 TMEM2-208ENST00000537329 581 ntTSL 20.94□□□□□ -2.262e-7■■□□□ 14.4
PRPF8Q6P2Q9 PAPD7-206ENST00000515721 603 ntTSL 324.16■■□□□ 1.465e-9■■□□□ 14.4
PRPF8Q6P2Q9 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC9.39□□□□□ -0.912e-6■■□□□ 14.4
Retrieved 100 of 73,762 protein–RNA pairs in 622.6 ms