RNA–Protein interactions for RNA: ENST00000457458.6

CDK16-204, Transcript of cyclin dependent kinase 16, humanhuman

TSL 1 (best) BASIC

Gene CDK16, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-204ENST00000457458 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
CDK16-204ENST00000457458 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
CDK16-204ENST00000457458 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
CDK16-204ENST00000457458 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
CDK16-204ENST00000457458 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
CDK16-204ENST00000457458 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
CDK16-204ENST00000457458 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
CDK16-204ENST00000457458 ABCC9O60706 1549 aa22.47■■□□□ 1.19
CDK16-204ENST00000457458 NACADO15069 1562 aa22.4■■□□□ 1.18
CDK16-204ENST00000457458 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
CDK16-204ENST00000457458 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
CDK16-204ENST00000457458 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.09
CDK16-204ENST00000457458 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
CDK16-204ENST00000457458 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
CDK16-204ENST00000457458 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.022e-6■■□□□ 12.2
CDK16-204ENST00000457458 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
CDK16-204ENST00000457458 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
CDK16-204ENST00000457458 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
CDK16-204ENST00000457458 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
CDK16-204ENST00000457458 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
CDK16-204ENST00000457458 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
CDK16-204ENST00000457458 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
CDK16-204ENST00000457458 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
CDK16-204ENST00000457458 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
CDK16-204ENST00000457458 SMARCA2P51531 1590 aa20.97■□□□□ 0.95
CDK16-204ENST00000457458 WIZO95785 1651 aa20.97■□□□□ 0.95
CDK16-204ENST00000457458 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
CDK16-204ENST00000457458 HMGXB3Q12766 1538 aa20.77■□□□□ 0.91
CDK16-204ENST00000457458 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
CDK16-204ENST00000457458 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
CDK16-204ENST00000457458 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
CDK16-204ENST00000457458 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
CDK16-204ENST00000457458 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
CDK16-204ENST00000457458 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
CDK16-204ENST00000457458 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
CDK16-204ENST00000457458 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
CDK16-204ENST00000457458 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.86
CDK16-204ENST00000457458 EEA1Q15075 1411 aa20.34■□□□□ 0.85
CDK16-204ENST00000457458 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
CDK16-204ENST00000457458 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
CDK16-204ENST00000457458 KIF21BO75037 1637 aa20.23■□□□□ 0.83
CDK16-204ENST00000457458 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
CDK16-204ENST00000457458 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
CDK16-204ENST00000457458 CFTRP13569 1480 aa20.06■□□□□ 0.8
CDK16-204ENST00000457458 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
CDK16-204ENST00000457458 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
CDK16-204ENST00000457458 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
CDK16-204ENST00000457458 SOGA1O94964 1423 aa19.97■□□□□ 0.79
CDK16-204ENST00000457458 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
CDK16-204ENST00000457458 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
CDK16-204ENST00000457458 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
CDK16-204ENST00000457458 NESP48681 1621 aa19.8■□□□□ 0.76
CDK16-204ENST00000457458 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
CDK16-204ENST00000457458 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
CDK16-204ENST00000457458 CUX1P39880 1505 aa19.77■□□□□ 0.75
CDK16-204ENST00000457458 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
CDK16-204ENST00000457458 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
CDK16-204ENST00000457458 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
CDK16-204ENST00000457458 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
CDK16-204ENST00000457458 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
CDK16-204ENST00000457458 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
CDK16-204ENST00000457458 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
CDK16-204ENST00000457458 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
CDK16-204ENST00000457458 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
CDK16-204ENST00000457458 CUL7Q14999 1698 aa19.62■□□□□ 0.73
CDK16-204ENST00000457458 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
CDK16-204ENST00000457458 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
CDK16-204ENST00000457458 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
CDK16-204ENST00000457458 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
CDK16-204ENST00000457458 ABCA5Q8WWZ7 1642 aa19.53■□□□□ 0.72
CDK16-204ENST00000457458 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
CDK16-204ENST00000457458 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
CDK16-204ENST00000457458 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
CDK16-204ENST00000457458 CTTNBP2Q8WZ74 1663 aa19.47■□□□□ 0.71
CDK16-204ENST00000457458 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
CDK16-204ENST00000457458 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
CDK16-204ENST00000457458 CUX2O14529 1486 aa19.43■□□□□ 0.7
CDK16-204ENST00000457458 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
CDK16-204ENST00000457458 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
CDK16-204ENST00000457458 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
CDK16-204ENST00000457458 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
CDK16-204ENST00000457458 CFAP43Q8NDM7 1665 aa19.37■□□□□ 0.69
CDK16-204ENST00000457458 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
CDK16-204ENST00000457458 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
CDK16-204ENST00000457458 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
CDK16-204ENST00000457458 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
CDK16-204ENST00000457458 IGF1RP08069 1367 aa19.31■□□□□ 0.68
CDK16-204ENST00000457458 VPS8Q8N3P4 1428 aa19.31■□□□□ 0.68
CDK16-204ENST00000457458 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
CDK16-204ENST00000457458 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
CDK16-204ENST00000457458 SAMD9Q5K651 1589 aa19.29■□□□□ 0.68
CDK16-204ENST00000457458 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.683e-7■■■■■ 33.1
CDK16-204ENST00000457458 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
CDK16-204ENST00000457458 WDR62O43379 1518 aa19.26■□□□□ 0.67
CDK16-204ENST00000457458 HRCP23327 699 aa19.26■□□□□ 0.67
CDK16-204ENST00000457458 CLIP1P30622 1438 aa19.25■□□□□ 0.67
CDK16-204ENST00000457458 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
CDK16-204ENST00000457458 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
CDK16-204ENST00000457458 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
CDK16-204ENST00000457458 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms