RNA–Protein interactions for RNA: ENST00000434927.5

RBM39-214, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-214ENST00000434927 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.34
RBM39-214ENST00000434927 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
RBM39-214ENST00000434927 ABCC9O60706 1549 aa20.97■□□□□ 0.95
RBM39-214ENST00000434927 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
RBM39-214ENST00000434927 NACADO15069 1562 aa19.92■□□□□ 0.78
RBM39-214ENST00000434927 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
RBM39-214ENST00000434927 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
RBM39-214ENST00000434927 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
RBM39-214ENST00000434927 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
RBM39-214ENST00000434927 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
RBM39-214ENST00000434927 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
RBM39-214ENST00000434927 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
RBM39-214ENST00000434927 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
RBM39-214ENST00000434927 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
RBM39-214ENST00000434927 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
RBM39-214ENST00000434927 CC2D2AQ9P2K1 1620 aa18.99■□□□□ 0.63
RBM39-214ENST00000434927 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
RBM39-214ENST00000434927 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
RBM39-214ENST00000434927 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
RBM39-214ENST00000434927 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
RBM39-214ENST00000434927 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
RBM39-214ENST00000434927 SMARCA2P51531 1590 aa18.27■□□□□ 0.52
RBM39-214ENST00000434927 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
RBM39-214ENST00000434927 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
RBM39-214ENST00000434927 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
RBM39-214ENST00000434927 CUX2O14529 1486 aa18.16■□□□□ 0.5
RBM39-214ENST00000434927 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
RBM39-214ENST00000434927 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
RBM39-214ENST00000434927 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
RBM39-214ENST00000434927 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
RBM39-214ENST00000434927 NESP48681 1621 aa18.02■□□□□ 0.48
RBM39-214ENST00000434927 LAMC3Q9Y6N6 1575 aa17.96■□□□□ 0.47
RBM39-214ENST00000434927 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
RBM39-214ENST00000434927 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
RBM39-214ENST00000434927 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
RBM39-214ENST00000434927 WIZO95785 1651 aa17.8■□□□□ 0.44
RBM39-214ENST00000434927 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
RBM39-214ENST00000434927 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
RBM39-214ENST00000434927 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
RBM39-214ENST00000434927 RSF1Q96T23 1441 aaPredicted RBP17.68■□□□□ 0.42
RBM39-214ENST00000434927 WDR62O43379 1518 aa17.67■□□□□ 0.42
RBM39-214ENST00000434927 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
RBM39-214ENST00000434927 CFTRP13569 1480 aa17.62■□□□□ 0.41
RBM39-214ENST00000434927 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
RBM39-214ENST00000434927 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
RBM39-214ENST00000434927 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
RBM39-214ENST00000434927 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
RBM39-214ENST00000434927 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
RBM39-214ENST00000434927 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
RBM39-214ENST00000434927 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
RBM39-214ENST00000434927 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
RBM39-214ENST00000434927 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
RBM39-214ENST00000434927 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
RBM39-214ENST00000434927 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
RBM39-214ENST00000434927 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
RBM39-214ENST00000434927 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.34
RBM39-214ENST00000434927 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
RBM39-214ENST00000434927 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
RBM39-214ENST00000434927 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
RBM39-214ENST00000434927 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
RBM39-214ENST00000434927 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
RBM39-214ENST00000434927 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
RBM39-214ENST00000434927 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.328e-13■■■■□ 25.3
RBM39-214ENST00000434927 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
RBM39-214ENST00000434927 WDR97A6NE52 1622 aa17■□□□□ 0.31
RBM39-214ENST00000434927 CHD1O14646 1710 aa16.99■□□□□ 0.31
RBM39-214ENST00000434927 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
RBM39-214ENST00000434927 SOGA1O94964 1423 aa16.98■□□□□ 0.31
RBM39-214ENST00000434927 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
RBM39-214ENST00000434927 CUX1P39880 1505 aa16.95■□□□□ 0.3
RBM39-214ENST00000434927 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
RBM39-214ENST00000434927 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
RBM39-214ENST00000434927 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
RBM39-214ENST00000434927 FBLN2P98095 1184 aa16.87■□□□□ 0.29
RBM39-214ENST00000434927 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
RBM39-214ENST00000434927 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
RBM39-214ENST00000434927 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
RBM39-214ENST00000434927 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
RBM39-214ENST00000434927 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
RBM39-214ENST00000434927 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
RBM39-214ENST00000434927 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
RBM39-214ENST00000434927 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
RBM39-214ENST00000434927 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
RBM39-214ENST00000434927 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
RBM39-214ENST00000434927 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
RBM39-214ENST00000434927 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
RBM39-214ENST00000434927 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
RBM39-214ENST00000434927 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
RBM39-214ENST00000434927 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
RBM39-214ENST00000434927 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
RBM39-214ENST00000434927 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
RBM39-214ENST00000434927 NUP160Q12769 1436 aa16.62■□□□□ 0.25
RBM39-214ENST00000434927 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
RBM39-214ENST00000434927 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
RBM39-214ENST00000434927 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
RBM39-214ENST00000434927 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
RBM39-214ENST00000434927 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
RBM39-214ENST00000434927 ERCC6L2Q5T890 1561 aa16.52■□□□□ 0.24
RBM39-214ENST00000434927 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
RBM39-214ENST00000434927 PRG4Q92954 1404 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms