RNA–Protein interactions for RNA: ENST00000608165.1

ELL-205, Transcript of elongation factor for RNA polymerase II, humanhuman

TSL 2

Gene ELL, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL-205ENST00000608165 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
ELL-205ENST00000608165 ABCC9O60706 1549 aa29.76■■■□□ 2.36
ELL-205ENST00000608165 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
ELL-205ENST00000608165 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
ELL-205ENST00000608165 RB1CC1Q8TDY2 1594 aa28.04■■■□□ 2.08
ELL-205ENST00000608165 NACADO15069 1562 aa27.69■■■□□ 2.02
ELL-205ENST00000608165 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
ELL-205ENST00000608165 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
ELL-205ENST00000608165 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
ELL-205ENST00000608165 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
ELL-205ENST00000608165 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
ELL-205ENST00000608165 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
ELL-205ENST00000608165 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.88
ELL-205ENST00000608165 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
ELL-205ENST00000608165 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
ELL-205ENST00000608165 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
ELL-205ENST00000608165 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
ELL-205ENST00000608165 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
ELL-205ENST00000608165 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
ELL-205ENST00000608165 CUX2O14529 1486 aa25.85■■□□□ 1.73
ELL-205ENST00000608165 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
ELL-205ENST00000608165 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
ELL-205ENST00000608165 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
ELL-205ENST00000608165 NESP48681 1621 aa25.39■■□□□ 1.66
ELL-205ENST00000608165 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
ELL-205ENST00000608165 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
ELL-205ENST00000608165 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
ELL-205ENST00000608165 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
ELL-205ENST00000608165 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
ELL-205ENST00000608165 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
ELL-205ENST00000608165 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
ELL-205ENST00000608165 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
ELL-205ENST00000608165 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
ELL-205ENST00000608165 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
ELL-205ENST00000608165 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
ELL-205ENST00000608165 MROH2BQ7Z745 1585 aa24.82■■□□□ 1.56
ELL-205ENST00000608165 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
ELL-205ENST00000608165 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
ELL-205ENST00000608165 WDR62O43379 1518 aa24.73■■□□□ 1.55
ELL-205ENST00000608165 OSCARQ8IYS5 282 aa24.65■■□□□ 1.54
ELL-205ENST00000608165 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
ELL-205ENST00000608165 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
ELL-205ENST00000608165 WIZO95785 1651 aa24.5■■□□□ 1.51
ELL-205ENST00000608165 CFTRP13569 1480 aa24.38■■□□□ 1.49
ELL-205ENST00000608165 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
ELL-205ENST00000608165 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
ELL-205ENST00000608165 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
ELL-205ENST00000608165 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
ELL-205ENST00000608165 ARHGEF11O15085 1522 aa24.2■■□□□ 1.46
ELL-205ENST00000608165 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
ELL-205ENST00000608165 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
ELL-205ENST00000608165 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
ELL-205ENST00000608165 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
ELL-205ENST00000608165 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
ELL-205ENST00000608165 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
ELL-205ENST00000608165 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
ELL-205ENST00000608165 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
ELL-205ENST00000608165 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
ELL-205ENST00000608165 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
ELL-205ENST00000608165 FBLN2P98095 1184 aa23.92■■□□□ 1.42
ELL-205ENST00000608165 CHD1O14646 1710 aa23.91■■□□□ 1.42
ELL-205ENST00000608165 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
ELL-205ENST00000608165 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
ELL-205ENST00000608165 AQRO60306 1485 aaKnown RBP eCLIP23.88■■□□□ 1.411e-6■■■■■ 28.9
ELL-205ENST00000608165 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.41
ELL-205ENST00000608165 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
ELL-205ENST00000608165 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
ELL-205ENST00000608165 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
ELL-205ENST00000608165 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
ELL-205ENST00000608165 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
ELL-205ENST00000608165 SOGA1O94964 1423 aa23.62■■□□□ 1.37
ELL-205ENST00000608165 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
ELL-205ENST00000608165 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
ELL-205ENST00000608165 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
ELL-205ENST00000608165 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
ELL-205ENST00000608165 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
ELL-205ENST00000608165 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
ELL-205ENST00000608165 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
ELL-205ENST00000608165 GRIN2BQ13224 1484 aa23.46■■□□□ 1.35
ELL-205ENST00000608165 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
ELL-205ENST00000608165 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
ELL-205ENST00000608165 CUX1P39880 1505 aa23.35■■□□□ 1.33
ELL-205ENST00000608165 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
ELL-205ENST00000608165 ERCC6L2Q5T890 1561 aa23.21■■□□□ 1.31
ELL-205ENST00000608165 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
ELL-205ENST00000608165 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
ELL-205ENST00000608165 GRIN2AQ12879 1464 aa23.14■■□□□ 1.29
ELL-205ENST00000608165 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
ELL-205ENST00000608165 NUP160Q12769 1436 aa23.08■■□□□ 1.28
ELL-205ENST00000608165 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
ELL-205ENST00000608165 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
ELL-205ENST00000608165 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
ELL-205ENST00000608165 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
ELL-205ENST00000608165 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
ELL-205ENST00000608165 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
ELL-205ENST00000608165 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
ELL-205ENST00000608165 NPM1P06748 294 aaKnown RBP eCLIP22.91■■□□□ 1.26
ELL-205ENST00000608165 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
ELL-205ENST00000608165 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
ELL-205ENST00000608165 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms