RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
SPTLC3-206ENST00000485952 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
SPTLC3-206ENST00000485952 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
SPTLC3-206ENST00000485952 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
SPTLC3-206ENST00000485952 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
SPTLC3-206ENST00000485952 FOXD1Q16676 465 aa15.64■□□□□ 0.09
SPTLC3-206ENST00000485952 ADRA2BP18089 450 aa15.28■□□□□ 0.04
SPTLC3-206ENST00000485952 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
SPTLC3-206ENST00000485952 PIAS4Q8N2W9 510 aaPredicted RBP14.86□□□□□ -0.03
SPTLC3-206ENST00000485952 MSH5O43196 834 aa14.37□□□□□ -0.11
SPTLC3-206ENST00000485952 KCNA4P22459 653 aa14.35□□□□□ -0.11
SPTLC3-206ENST00000485952 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
SPTLC3-206ENST00000485952 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
SPTLC3-206ENST00000485952 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
SPTLC3-206ENST00000485952 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
SPTLC3-206ENST00000485952 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
SPTLC3-206ENST00000485952 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
SPTLC3-206ENST00000485952 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
SPTLC3-206ENST00000485952 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
SPTLC3-206ENST00000485952 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
SPTLC3-206ENST00000485952 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
SPTLC3-206ENST00000485952 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
SPTLC3-206ENST00000485952 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
SPTLC3-206ENST00000485952 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
SPTLC3-206ENST00000485952 ZBTB22O15209 634 aa13.17□□□□□ -0.3
SPTLC3-206ENST00000485952 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
SPTLC3-206ENST00000485952 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
SPTLC3-206ENST00000485952 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
SPTLC3-206ENST00000485952 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
SPTLC3-206ENST00000485952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.364e-9■■■□□ 16.1
SPTLC3-206ENST00000485952 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
SPTLC3-206ENST00000485952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
SPTLC3-206ENST00000485952 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
SPTLC3-206ENST00000485952 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
SPTLC3-206ENST00000485952 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
SPTLC3-206ENST00000485952 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
SPTLC3-206ENST00000485952 APLP2Q06481 763 aa12.44□□□□□ -0.42
SPTLC3-206ENST00000485952 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
SPTLC3-206ENST00000485952 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SPTLC3-206ENST00000485952 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
SPTLC3-206ENST00000485952 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
SPTLC3-206ENST00000485952 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
SPTLC3-206ENST00000485952 CAPN15O75808 1086 aa12.12□□□□□ -0.47
SPTLC3-206ENST00000485952 FKBP8Q14318 412 aa12.12□□□□□ -0.47
SPTLC3-206ENST00000485952 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
SPTLC3-206ENST00000485952 POLA2Q14181 598 aa12□□□□□ -0.49
SPTLC3-206ENST00000485952 FBLN2P98095 1184 aa11.96□□□□□ -0.49
SPTLC3-206ENST00000485952 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
SPTLC3-206ENST00000485952 ABCB7O75027 752 aa11.88□□□□□ -0.51
SPTLC3-206ENST00000485952 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
SPTLC3-206ENST00000485952 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
SPTLC3-206ENST00000485952 DSG3P32926 999 aa11.8□□□□□ -0.52
SPTLC3-206ENST00000485952 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
SPTLC3-206ENST00000485952 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
SPTLC3-206ENST00000485952 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
SPTLC3-206ENST00000485952 PROM2Q8N271 834 aa11.63□□□□□ -0.55
SPTLC3-206ENST00000485952 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
SPTLC3-206ENST00000485952 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
SPTLC3-206ENST00000485952 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
SPTLC3-206ENST00000485952 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
SPTLC3-206ENST00000485952 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
SPTLC3-206ENST00000485952 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
SPTLC3-206ENST00000485952 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
SPTLC3-206ENST00000485952 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
SPTLC3-206ENST00000485952 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTLC3-206ENST00000485952 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
SPTLC3-206ENST00000485952 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
SPTLC3-206ENST00000485952 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
SPTLC3-206ENST00000485952 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
SPTLC3-206ENST00000485952 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
SPTLC3-206ENST00000485952 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
SPTLC3-206ENST00000485952 MIER1Q8N108 512 aa11.2□□□□□ -0.62
SPTLC3-206ENST00000485952 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
SPTLC3-206ENST00000485952 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
SPTLC3-206ENST00000485952 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
SPTLC3-206ENST00000485952 SPOCK2Q92563 424 aa11.15□□□□□ -0.62
SPTLC3-206ENST00000485952 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
SPTLC3-206ENST00000485952 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
SPTLC3-206ENST00000485952 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
SPTLC3-206ENST00000485952 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
SPTLC3-206ENST00000485952 PKD2Q13563 968 aa11.02□□□□□ -0.65
SPTLC3-206ENST00000485952 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
SPTLC3-206ENST00000485952 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
SPTLC3-206ENST00000485952 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
SPTLC3-206ENST00000485952 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
SPTLC3-206ENST00000485952 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
SPTLC3-206ENST00000485952 GSE1Q14687 1217 aa10.86□□□□□ -0.67
SPTLC3-206ENST00000485952 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
SPTLC3-206ENST00000485952 NUBP1P53384 320 aa10.82□□□□□ -0.68
SPTLC3-206ENST00000485952 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
SPTLC3-206ENST00000485952 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
SPTLC3-206ENST00000485952 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
SPTLC3-206ENST00000485952 RGL2O15211 777 aa10.79□□□□□ -0.68
SPTLC3-206ENST00000485952 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
SPTLC3-206ENST00000485952 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
SPTLC3-206ENST00000485952 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
SPTLC3-206ENST00000485952 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
SPTLC3-206ENST00000485952 BBXQ8WY36 941 aaPredicted RBP10.7□□□□□ -0.7
SPTLC3-206ENST00000485952 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
SPTLC3-206ENST00000485952 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms