RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
SPTLC3-206ENST00000485952 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
SPTLC3-206ENST00000485952 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
SPTLC3-206ENST00000485952 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
SPTLC3-206ENST00000485952 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
SPTLC3-206ENST00000485952 FOXD1Q16676 465 aa15.64■□□□□ 0.09
SPTLC3-206ENST00000485952 ADRA2BP18089 450 aa15.28■□□□□ 0.04
SPTLC3-206ENST00000485952 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
SPTLC3-206ENST00000485952 PIAS4Q8N2W9 510 aaPredicted RBP14.86□□□□□ -0.03
SPTLC3-206ENST00000485952 MSH5O43196 834 aa14.37□□□□□ -0.11
SPTLC3-206ENST00000485952 KCNA4P22459 653 aa14.35□□□□□ -0.11
SPTLC3-206ENST00000485952 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
SPTLC3-206ENST00000485952 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
SPTLC3-206ENST00000485952 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
SPTLC3-206ENST00000485952 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
SPTLC3-206ENST00000485952 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
SPTLC3-206ENST00000485952 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
SPTLC3-206ENST00000485952 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
SPTLC3-206ENST00000485952 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
SPTLC3-206ENST00000485952 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
SPTLC3-206ENST00000485952 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
SPTLC3-206ENST00000485952 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
SPTLC3-206ENST00000485952 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
SPTLC3-206ENST00000485952 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
SPTLC3-206ENST00000485952 ZBTB22O15209 634 aa13.17□□□□□ -0.3
SPTLC3-206ENST00000485952 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
SPTLC3-206ENST00000485952 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
SPTLC3-206ENST00000485952 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
SPTLC3-206ENST00000485952 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
SPTLC3-206ENST00000485952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.364e-9■■■□□ 16.1
SPTLC3-206ENST00000485952 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
SPTLC3-206ENST00000485952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
SPTLC3-206ENST00000485952 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
SPTLC3-206ENST00000485952 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
SPTLC3-206ENST00000485952 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
SPTLC3-206ENST00000485952 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
SPTLC3-206ENST00000485952 APLP2Q06481 763 aa12.44□□□□□ -0.42
SPTLC3-206ENST00000485952 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
SPTLC3-206ENST00000485952 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SPTLC3-206ENST00000485952 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
SPTLC3-206ENST00000485952 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
SPTLC3-206ENST00000485952 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
SPTLC3-206ENST00000485952 CAPN15O75808 1086 aa12.12□□□□□ -0.47
SPTLC3-206ENST00000485952 FKBP8Q14318 412 aa12.12□□□□□ -0.47
SPTLC3-206ENST00000485952 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
SPTLC3-206ENST00000485952 POLA2Q14181 598 aa12□□□□□ -0.49
SPTLC3-206ENST00000485952 FBLN2P98095 1184 aa11.96□□□□□ -0.49
SPTLC3-206ENST00000485952 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
SPTLC3-206ENST00000485952 ABCB7O75027 752 aa11.88□□□□□ -0.51
SPTLC3-206ENST00000485952 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
SPTLC3-206ENST00000485952 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
SPTLC3-206ENST00000485952 DSG3P32926 999 aa11.8□□□□□ -0.52
SPTLC3-206ENST00000485952 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
SPTLC3-206ENST00000485952 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
SPTLC3-206ENST00000485952 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
SPTLC3-206ENST00000485952 PROM2Q8N271 834 aa11.63□□□□□ -0.55
SPTLC3-206ENST00000485952 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
SPTLC3-206ENST00000485952 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
SPTLC3-206ENST00000485952 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
SPTLC3-206ENST00000485952 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
SPTLC3-206ENST00000485952 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
SPTLC3-206ENST00000485952 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
SPTLC3-206ENST00000485952 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
SPTLC3-206ENST00000485952 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
SPTLC3-206ENST00000485952 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTLC3-206ENST00000485952 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
SPTLC3-206ENST00000485952 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
SPTLC3-206ENST00000485952 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
SPTLC3-206ENST00000485952 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
SPTLC3-206ENST00000485952 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
SPTLC3-206ENST00000485952 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
SPTLC3-206ENST00000485952 MIER1Q8N108 512 aa11.2□□□□□ -0.62
SPTLC3-206ENST00000485952 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
SPTLC3-206ENST00000485952 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
SPTLC3-206ENST00000485952 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
SPTLC3-206ENST00000485952 SPOCK2Q92563 424 aa11.15□□□□□ -0.62
SPTLC3-206ENST00000485952 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
SPTLC3-206ENST00000485952 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
SPTLC3-206ENST00000485952 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
SPTLC3-206ENST00000485952 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
SPTLC3-206ENST00000485952 PKD2Q13563 968 aa11.02□□□□□ -0.65
SPTLC3-206ENST00000485952 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
SPTLC3-206ENST00000485952 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
SPTLC3-206ENST00000485952 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
SPTLC3-206ENST00000485952 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
SPTLC3-206ENST00000485952 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
SPTLC3-206ENST00000485952 GSE1Q14687 1217 aa10.86□□□□□ -0.67
SPTLC3-206ENST00000485952 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
SPTLC3-206ENST00000485952 NUBP1P53384 320 aa10.82□□□□□ -0.68
SPTLC3-206ENST00000485952 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
SPTLC3-206ENST00000485952 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
SPTLC3-206ENST00000485952 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
SPTLC3-206ENST00000485952 RGL2O15211 777 aa10.79□□□□□ -0.68
SPTLC3-206ENST00000485952 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
SPTLC3-206ENST00000485952 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
SPTLC3-206ENST00000485952 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
SPTLC3-206ENST00000485952 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
SPTLC3-206ENST00000485952 BBXQ8WY36 941 aaPredicted RBP10.7□□□□□ -0.7
SPTLC3-206ENST00000485952 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
SPTLC3-206ENST00000485952 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms