RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
IRF3-210ENST00000595240 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
IRF3-210ENST00000595240 ABCC9O60706 1549 aa34.85■■■■□ 3.17
IRF3-210ENST00000595240 RB1CC1Q8TDY2 1594 aa33.36■■■□□ 2.93
IRF3-210ENST00000595240 NACADO15069 1562 aa33.26■■■□□ 2.92
IRF3-210ENST00000595240 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
IRF3-210ENST00000595240 MYO15BQ96JP2 1530 aa32.99■■■□□ 2.87
IRF3-210ENST00000595240 ZCCHC6Q5VYS8 1495 aaKnown RBP32.87■■■□□ 2.85
IRF3-210ENST00000595240 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
IRF3-210ENST00000595240 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
IRF3-210ENST00000595240 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
IRF3-210ENST00000595240 BICRAQ9NZM4 1560 aa32.39■■■□□ 2.78
IRF3-210ENST00000595240 DNAJC5BQ9UF47 199 aa32.34■■■□□ 2.77
IRF3-210ENST00000595240 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
IRF3-210ENST00000595240 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
IRF3-210ENST00000595240 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
IRF3-210ENST00000595240 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
IRF3-210ENST00000595240 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
IRF3-210ENST00000595240 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
IRF3-210ENST00000595240 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
IRF3-210ENST00000595240 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
IRF3-210ENST00000595240 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
IRF3-210ENST00000595240 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
IRF3-210ENST00000595240 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
IRF3-210ENST00000595240 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
IRF3-210ENST00000595240 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
IRF3-210ENST00000595240 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
IRF3-210ENST00000595240 WIZO95785 1651 aa30.08■■■□□ 2.41
IRF3-210ENST00000595240 NESP48681 1621 aa30.07■■■□□ 2.4
IRF3-210ENST00000595240 ERCC6Q03468 1493 aa30.05■■■□□ 2.4
IRF3-210ENST00000595240 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
IRF3-210ENST00000595240 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
IRF3-210ENST00000595240 CUX2O14529 1486 aa29.87■■■□□ 2.37
IRF3-210ENST00000595240 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
IRF3-210ENST00000595240 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
IRF3-210ENST00000595240 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
IRF3-210ENST00000595240 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
IRF3-210ENST00000595240 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
IRF3-210ENST00000595240 CFTRP13569 1480 aa29.56■■■□□ 2.32
IRF3-210ENST00000595240 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
IRF3-210ENST00000595240 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.31
IRF3-210ENST00000595240 CCDC88BA6NC98 1476 aa29.44■■■□□ 2.3
IRF3-210ENST00000595240 CEP164Q9UPV0 1460 aa29.43■■■□□ 2.3
IRF3-210ENST00000595240 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
IRF3-210ENST00000595240 WDR62O43379 1518 aa29.38■■■□□ 2.29
IRF3-210ENST00000595240 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
IRF3-210ENST00000595240 PRDM2Q13029 1718 aa29.18■■■□□ 2.26
IRF3-210ENST00000595240 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
IRF3-210ENST00000595240 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
IRF3-210ENST00000595240 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
IRF3-210ENST00000595240 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
IRF3-210ENST00000595240 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
IRF3-210ENST00000595240 ZNF608Q9ULD9 1512 aaPredicted RBP28.75■■■□□ 2.19
IRF3-210ENST00000595240 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
IRF3-210ENST00000595240 TARBP1Q13395 1621 aaKnown RBP28.64■■■□□ 2.18
IRF3-210ENST00000595240 CUX1P39880 1505 aa28.61■■■□□ 2.17
IRF3-210ENST00000595240 OSCARQ8IYS5 282 aa28.59■■■□□ 2.17
IRF3-210ENST00000595240 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
IRF3-210ENST00000595240 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
IRF3-210ENST00000595240 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
IRF3-210ENST00000595240 SOGA1O94964 1423 aa28.55■■■□□ 2.16
IRF3-210ENST00000595240 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.165e-9■■■■□ 19.9
IRF3-210ENST00000595240 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
IRF3-210ENST00000595240 WDR97A6NE52 1622 aa28.39■■■□□ 2.13
IRF3-210ENST00000595240 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
IRF3-210ENST00000595240 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
IRF3-210ENST00000595240 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
IRF3-210ENST00000595240 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
IRF3-210ENST00000595240 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
IRF3-210ENST00000595240 FBLN2P98095 1184 aa28.24■■■□□ 2.11
IRF3-210ENST00000595240 CHD1O14646 1710 aa28.23■■■□□ 2.11
IRF3-210ENST00000595240 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
IRF3-210ENST00000595240 MAGI1Q96QZ7 1491 aaPredicted RBP28.22■■■□□ 2.11
IRF3-210ENST00000595240 BIVM-ERCC5R4GMW8 1640 aa28.22■■■□□ 2.11
IRF3-210ENST00000595240 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
IRF3-210ENST00000595240 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
IRF3-210ENST00000595240 ABCA5Q8WWZ7 1642 aa28.16■■■□□ 2.1
IRF3-210ENST00000595240 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
IRF3-210ENST00000595240 RIMBP3CA6NJZ7 1639 aa28.12■■■□□ 2.09
IRF3-210ENST00000595240 RIMBP3BA6NNM3 1639 aa28.12■■■□□ 2.09
IRF3-210ENST00000595240 RIMBP3Q9UFD9 1639 aa28.12■■■□□ 2.09
IRF3-210ENST00000595240 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
IRF3-210ENST00000595240 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
IRF3-210ENST00000595240 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
IRF3-210ENST00000595240 CLASP1Q7Z460 1538 aa28.01■■■□□ 2.07
IRF3-210ENST00000595240 ADAMTS12P58397 1594 aa27.92■■■□□ 2.06
IRF3-210ENST00000595240 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
IRF3-210ENST00000595240 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
IRF3-210ENST00000595240 FHAD1B1AJZ9 1412 aa27.89■■■□□ 2.06
IRF3-210ENST00000595240 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
IRF3-210ENST00000595240 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
IRF3-210ENST00000595240 NUP160Q12769 1436 aa27.81■■■□□ 2.04
IRF3-210ENST00000595240 CEP170Q5SW79 1584 aa27.76■■■□□ 2.03
IRF3-210ENST00000595240 KIF27Q86VH2 1401 aa27.74■■■□□ 2.03
IRF3-210ENST00000595240 IGF1RP08069 1367 aa27.69■■■□□ 2.02
IRF3-210ENST00000595240 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
IRF3-210ENST00000595240 ERCC6L2Q5T890 1561 aa27.58■■■□□ 2.01
IRF3-210ENST00000595240 CUL7Q14999 1698 aa27.56■■■□□ 2
IRF3-210ENST00000595240 RUSC2Q8N2Y8 1516 aa27.51■■■□□ 2
IRF3-210ENST00000595240 JPH4Q96JJ6 628 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms