RNA–Protein interactions for RNA: ENST00000602034.1

SARS2-214, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene SARS2, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-214ENST00000602034 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
SARS2-214ENST00000602034 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.02
SARS2-214ENST00000602034 ABCC9O60706 1549 aa26.94■■□□□ 1.9
SARS2-214ENST00000602034 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
SARS2-214ENST00000602034 NACADO15069 1562 aa25.96■■□□□ 1.75
SARS2-214ENST00000602034 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
SARS2-214ENST00000602034 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
SARS2-214ENST00000602034 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
SARS2-214ENST00000602034 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
SARS2-214ENST00000602034 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
SARS2-214ENST00000602034 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
SARS2-214ENST00000602034 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
SARS2-214ENST00000602034 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.615e-6■■■■□ 22.2
SARS2-214ENST00000602034 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
SARS2-214ENST00000602034 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
SARS2-214ENST00000602034 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
SARS2-214ENST00000602034 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
SARS2-214ENST00000602034 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
SARS2-214ENST00000602034 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
SARS2-214ENST00000602034 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.45
SARS2-214ENST00000602034 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
SARS2-214ENST00000602034 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
SARS2-214ENST00000602034 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
SARS2-214ENST00000602034 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
SARS2-214ENST00000602034 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
SARS2-214ENST00000602034 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
SARS2-214ENST00000602034 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
SARS2-214ENST00000602034 WIZO95785 1651 aa23.7■■□□□ 1.39
SARS2-214ENST00000602034 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
SARS2-214ENST00000602034 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
SARS2-214ENST00000602034 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
SARS2-214ENST00000602034 NESP48681 1621 aa23.33■■□□□ 1.33
SARS2-214ENST00000602034 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
SARS2-214ENST00000602034 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
SARS2-214ENST00000602034 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
SARS2-214ENST00000602034 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
SARS2-214ENST00000602034 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
SARS2-214ENST00000602034 CFTRP13569 1480 aa23.11■■□□□ 1.29
SARS2-214ENST00000602034 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
SARS2-214ENST00000602034 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
SARS2-214ENST00000602034 CUX2O14529 1486 aa22.99■■□□□ 1.27
SARS2-214ENST00000602034 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
SARS2-214ENST00000602034 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
SARS2-214ENST00000602034 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
SARS2-214ENST00000602034 MRC2Q9UBG0 1479 aa22.9■■□□□ 1.26
SARS2-214ENST00000602034 WDR62O43379 1518 aa22.85■■□□□ 1.25
SARS2-214ENST00000602034 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
SARS2-214ENST00000602034 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
SARS2-214ENST00000602034 DNMBPQ6XZF7 1577 aa22.61■■□□□ 1.21
SARS2-214ENST00000602034 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
SARS2-214ENST00000602034 CUX1P39880 1505 aa22.45■■□□□ 1.18
SARS2-214ENST00000602034 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
SARS2-214ENST00000602034 POLA1P09884 1462 aaPredicted RBP22.42■■□□□ 1.18
SARS2-214ENST00000602034 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
SARS2-214ENST00000602034 FGD5Q6ZNL6 1462 aa22.36■■□□□ 1.17
SARS2-214ENST00000602034 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.17
SARS2-214ENST00000602034 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
SARS2-214ENST00000602034 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
SARS2-214ENST00000602034 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
SARS2-214ENST00000602034 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
SARS2-214ENST00000602034 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SARS2-214ENST00000602034 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
SARS2-214ENST00000602034 SOGA1O94964 1423 aa22.28■■□□□ 1.16
SARS2-214ENST00000602034 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
SARS2-214ENST00000602034 DNAJC5Q9H3Z4 198 aa22.19■■□□□ 1.14
SARS2-214ENST00000602034 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.14
SARS2-214ENST00000602034 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
SARS2-214ENST00000602034 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
SARS2-214ENST00000602034 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
SARS2-214ENST00000602034 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
SARS2-214ENST00000602034 CHD1O14646 1710 aa22.06■■□□□ 1.12
SARS2-214ENST00000602034 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
SARS2-214ENST00000602034 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
SARS2-214ENST00000602034 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
SARS2-214ENST00000602034 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
SARS2-214ENST00000602034 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
SARS2-214ENST00000602034 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
SARS2-214ENST00000602034 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
SARS2-214ENST00000602034 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
SARS2-214ENST00000602034 FBLN2P98095 1184 aa21.86■■□□□ 1.09
SARS2-214ENST00000602034 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
SARS2-214ENST00000602034 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
SARS2-214ENST00000602034 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
SARS2-214ENST00000602034 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
SARS2-214ENST00000602034 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
SARS2-214ENST00000602034 CUL7Q14999 1698 aa21.75■■□□□ 1.07
SARS2-214ENST00000602034 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
SARS2-214ENST00000602034 RIMBP3CA6NJZ7 1639 aa21.72■■□□□ 1.07
SARS2-214ENST00000602034 RIMBP3BA6NNM3 1639 aa21.72■■□□□ 1.07
SARS2-214ENST00000602034 RIMBP3Q9UFD9 1639 aa21.72■■□□□ 1.07
SARS2-214ENST00000602034 IGF1RP08069 1367 aa21.71■■□□□ 1.07
SARS2-214ENST00000602034 ARHGEF11O15085 1522 aa21.69■■□□□ 1.06
SARS2-214ENST00000602034 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
SARS2-214ENST00000602034 NUP160Q12769 1436 aa21.68■■□□□ 1.06
SARS2-214ENST00000602034 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
SARS2-214ENST00000602034 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
SARS2-214ENST00000602034 SHROOM2Q13796 1616 aa21.57■■□□□ 1.04
SARS2-214ENST00000602034 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
SARS2-214ENST00000602034 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
SARS2-214ENST00000602034 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms