RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
BRPF3-204ENST00000441730 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
BRPF3-204ENST00000441730 ABCC9O60706 1549 aa19.07■□□□□ 0.64
BRPF3-204ENST00000441730 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
BRPF3-204ENST00000441730 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
BRPF3-204ENST00000441730 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
BRPF3-204ENST00000441730 MYT1Q01538 1121 aa18.49■□□□□ 0.55
BRPF3-204ENST00000441730 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
BRPF3-204ENST00000441730 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
BRPF3-204ENST00000441730 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
BRPF3-204ENST00000441730 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
BRPF3-204ENST00000441730 NACADO15069 1562 aa17.95■□□□□ 0.46
BRPF3-204ENST00000441730 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
BRPF3-204ENST00000441730 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
BRPF3-204ENST00000441730 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
BRPF3-204ENST00000441730 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
BRPF3-204ENST00000441730 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
BRPF3-204ENST00000441730 PRKCSHP14314 528 aaPredicted RBP17.43■□□□□ 0.38
BRPF3-204ENST00000441730 CECR2Q9BXF3 1484 aa17.42■□□□□ 0.38
BRPF3-204ENST00000441730 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.38
BRPF3-204ENST00000441730 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
BRPF3-204ENST00000441730 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
BRPF3-204ENST00000441730 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
BRPF3-204ENST00000441730 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
BRPF3-204ENST00000441730 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
BRPF3-204ENST00000441730 APLP2Q06481 763 aa17.12■□□□□ 0.33
BRPF3-204ENST00000441730 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
BRPF3-204ENST00000441730 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
BRPF3-204ENST00000441730 WIZO95785 1651 aa16.97■□□□□ 0.31
BRPF3-204ENST00000441730 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
BRPF3-204ENST00000441730 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
BRPF3-204ENST00000441730 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
BRPF3-204ENST00000441730 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
BRPF3-204ENST00000441730 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
BRPF3-204ENST00000441730 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
BRPF3-204ENST00000441730 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
BRPF3-204ENST00000441730 NCAPD3P42695 1498 aa16.68■□□□□ 0.26
BRPF3-204ENST00000441730 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
BRPF3-204ENST00000441730 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
BRPF3-204ENST00000441730 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
BRPF3-204ENST00000441730 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
BRPF3-204ENST00000441730 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
BRPF3-204ENST00000441730 HRCP23327 699 aa16.56■□□□□ 0.24
BRPF3-204ENST00000441730 NESP48681 1621 aa16.55■□□□□ 0.24
BRPF3-204ENST00000441730 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
BRPF3-204ENST00000441730 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
BRPF3-204ENST00000441730 HMGXB3Q12766 1538 aa16.47■□□□□ 0.23
BRPF3-204ENST00000441730 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
BRPF3-204ENST00000441730 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
BRPF3-204ENST00000441730 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
BRPF3-204ENST00000441730 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
BRPF3-204ENST00000441730 RANGAP1P46060 587 aaPredicted RBP16.32■□□□□ 0.2
BRPF3-204ENST00000441730 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.2
BRPF3-204ENST00000441730 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
BRPF3-204ENST00000441730 CFTRP13569 1480 aa16.27■□□□□ 0.19
BRPF3-204ENST00000441730 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
BRPF3-204ENST00000441730 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
BRPF3-204ENST00000441730 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
BRPF3-204ENST00000441730 FBLN2P98095 1184 aa16.18■□□□□ 0.18
BRPF3-204ENST00000441730 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
BRPF3-204ENST00000441730 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
BRPF3-204ENST00000441730 UBTFP17480 764 aaKnown RBP16.1■□□□□ 0.17
BRPF3-204ENST00000441730 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
BRPF3-204ENST00000441730 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
BRPF3-204ENST00000441730 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
BRPF3-204ENST00000441730 SOGA1O94964 1423 aa16.05■□□□□ 0.16
BRPF3-204ENST00000441730 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
BRPF3-204ENST00000441730 CUX1P39880 1505 aa16■□□□□ 0.15
BRPF3-204ENST00000441730 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
BRPF3-204ENST00000441730 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
BRPF3-204ENST00000441730 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
BRPF3-204ENST00000441730 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
BRPF3-204ENST00000441730 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
BRPF3-204ENST00000441730 CUX2O14529 1486 aa15.97■□□□□ 0.15
BRPF3-204ENST00000441730 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
BRPF3-204ENST00000441730 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
BRPF3-204ENST00000441730 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.146e-9■■■■■ 37.6
BRPF3-204ENST00000441730 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
BRPF3-204ENST00000441730 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
BRPF3-204ENST00000441730 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
BRPF3-204ENST00000441730 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
BRPF3-204ENST00000441730 ATP1B4Q9UN42 357 aaPredicted RBP15.85■□□□□ 0.13
BRPF3-204ENST00000441730 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
BRPF3-204ENST00000441730 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
BRPF3-204ENST00000441730 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
BRPF3-204ENST00000441730 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
BRPF3-204ENST00000441730 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
BRPF3-204ENST00000441730 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
BRPF3-204ENST00000441730 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
BRPF3-204ENST00000441730 IGF1RP08069 1367 aa15.74■□□□□ 0.11
BRPF3-204ENST00000441730 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
BRPF3-204ENST00000441730 ANP32EQ9BTT0 268 aa15.71■□□□□ 0.11
BRPF3-204ENST00000441730 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
BRPF3-204ENST00000441730 WDR62O43379 1518 aa15.7■□□□□ 0.1
BRPF3-204ENST00000441730 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
BRPF3-204ENST00000441730 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
BRPF3-204ENST00000441730 BIVM-ERCC5R4GMW8 1640 aa15.66■□□□□ 0.1
BRPF3-204ENST00000441730 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
BRPF3-204ENST00000441730 ACIN1Q9UKV3 1341 aaKnown RBP15.66■□□□□ 0.1
BRPF3-204ENST00000441730 UBE2Q2Q8WVN8 375 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms