RNA–Protein interactions for RNA: ENST00000472194.6

ATAD3B-203, Transcript of ATPase family, AAA domain containing 3B, humanhuman

TSL 1 (best)

Gene ATAD3B, Length 4,314 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-203ENST00000472194 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
ATAD3B-203ENST00000472194 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
ATAD3B-203ENST00000472194 SHROOM4Q9ULL8 1493 aa20.87■□□□□ 0.93
ATAD3B-203ENST00000472194 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
ATAD3B-203ENST00000472194 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
ATAD3B-203ENST00000472194 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
ATAD3B-203ENST00000472194 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
ATAD3B-203ENST00000472194 MYT1Q01538 1121 aa19.41■□□□□ 0.7
ATAD3B-203ENST00000472194 ABCC9O60706 1549 aa19.36■□□□□ 0.69
ATAD3B-203ENST00000472194 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
ATAD3B-203ENST00000472194 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
ATAD3B-203ENST00000472194 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
ATAD3B-203ENST00000472194 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.659e-7■■■■■ 28.2
ATAD3B-203ENST00000472194 APLP2Q06481 763 aa18.91■□□□□ 0.62
ATAD3B-203ENST00000472194 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
ATAD3B-203ENST00000472194 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
ATAD3B-203ENST00000472194 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
ATAD3B-203ENST00000472194 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
ATAD3B-203ENST00000472194 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
ATAD3B-203ENST00000472194 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
ATAD3B-203ENST00000472194 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
ATAD3B-203ENST00000472194 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
ATAD3B-203ENST00000472194 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
ATAD3B-203ENST00000472194 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
ATAD3B-203ENST00000472194 HRCP23327 699 aa18.27■□□□□ 0.51
ATAD3B-203ENST00000472194 ITGAEP38570 1179 aa18.19■□□□□ 0.5
ATAD3B-203ENST00000472194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.19■□□□□ 0.5
ATAD3B-203ENST00000472194 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
ATAD3B-203ENST00000472194 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
ATAD3B-203ENST00000472194 FBLN2P98095 1184 aa18■□□□□ 0.47
ATAD3B-203ENST00000472194 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
ATAD3B-203ENST00000472194 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
ATAD3B-203ENST00000472194 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
ATAD3B-203ENST00000472194 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
ATAD3B-203ENST00000472194 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
ATAD3B-203ENST00000472194 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
ATAD3B-203ENST00000472194 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
ATAD3B-203ENST00000472194 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
ATAD3B-203ENST00000472194 NACADO15069 1562 aa17.77■□□□□ 0.43
ATAD3B-203ENST00000472194 FAM50AQ14320 339 aaKnown RBP17.73■□□□□ 0.43
ATAD3B-203ENST00000472194 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
ATAD3B-203ENST00000472194 ERICH6Q7L0X2 663 aa17.69■□□□□ 0.42
ATAD3B-203ENST00000472194 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
ATAD3B-203ENST00000472194 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
ATAD3B-203ENST00000472194 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
ATAD3B-203ENST00000472194 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
ATAD3B-203ENST00000472194 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
ATAD3B-203ENST00000472194 TRIM52Q96A61 297 aa17.48■□□□□ 0.39
ATAD3B-203ENST00000472194 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
ATAD3B-203ENST00000472194 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
ATAD3B-203ENST00000472194 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
ATAD3B-203ENST00000472194 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
ATAD3B-203ENST00000472194 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
ATAD3B-203ENST00000472194 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
ATAD3B-203ENST00000472194 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
ATAD3B-203ENST00000472194 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
ATAD3B-203ENST00000472194 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
ATAD3B-203ENST00000472194 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.367e-7■■□□□ 13.9
ATAD3B-203ENST00000472194 ACIN1Q9UKV3 1341 aaKnown RBP17.29■□□□□ 0.36
ATAD3B-203ENST00000472194 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
ATAD3B-203ENST00000472194 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
ATAD3B-203ENST00000472194 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
ATAD3B-203ENST00000472194 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
ATAD3B-203ENST00000472194 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
ATAD3B-203ENST00000472194 CLIP1P30622 1438 aa17.16■□□□□ 0.34
ATAD3B-203ENST00000472194 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
ATAD3B-203ENST00000472194 SOGA1O94964 1423 aa17.13■□□□□ 0.33
ATAD3B-203ENST00000472194 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
ATAD3B-203ENST00000472194 WIZO95785 1651 aa17.1■□□□□ 0.33
ATAD3B-203ENST00000472194 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATAD3B-203ENST00000472194 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
ATAD3B-203ENST00000472194 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
ATAD3B-203ENST00000472194 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
ATAD3B-203ENST00000472194 KCNH8Q96L42 1107 aa17.05■□□□□ 0.32
ATAD3B-203ENST00000472194 NEFLP07196 543 aa17.04■□□□□ 0.32
ATAD3B-203ENST00000472194 MTUS2Q5JR59 1369 aa17.04■□□□□ 0.32
ATAD3B-203ENST00000472194 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.31
ATAD3B-203ENST00000472194 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.31
ATAD3B-203ENST00000472194 GOLGA3Q08378 1498 aa17■□□□□ 0.31
ATAD3B-203ENST00000472194 CUX2O14529 1486 aa16.99■□□□□ 0.31
ATAD3B-203ENST00000472194 EEA1Q15075 1411 aa16.99■□□□□ 0.31
ATAD3B-203ENST00000472194 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
ATAD3B-203ENST00000472194 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
ATAD3B-203ENST00000472194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■□□ 16.6
ATAD3B-203ENST00000472194 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
ATAD3B-203ENST00000472194 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
ATAD3B-203ENST00000472194 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
ATAD3B-203ENST00000472194 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
ATAD3B-203ENST00000472194 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
ATAD3B-203ENST00000472194 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
ATAD3B-203ENST00000472194 BCANQ96GW7 911 aa16.89■□□□□ 0.29
ATAD3B-203ENST00000472194 ANP32EQ9BTT0 268 aa16.89■□□□□ 0.29
ATAD3B-203ENST00000472194 TSPY4P0CV99 314 aa16.89■□□□□ 0.29
ATAD3B-203ENST00000472194 TSPY10P0CW01 314 aa16.89■□□□□ 0.29
ATAD3B-203ENST00000472194 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
ATAD3B-203ENST00000472194 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
ATAD3B-203ENST00000472194 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
ATAD3B-203ENST00000472194 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
ATAD3B-203ENST00000472194 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
ATAD3B-203ENST00000472194 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms