Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 AC011484.1-201ENST00000377652 1995 ntBASIC17.76■□□□□ 0.43
CPNE2Q96FN4 AC007225.1-201ENST00000566331 1836 ntBASIC17.76■□□□□ 0.43
CPNE2Q96FN4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE2Q96FN4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.74■□□□□ 0.43
CPNE2Q96FN4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 KRT87P-202ENST00000534226 1464 ntBASIC17.74■□□□□ 0.43
CPNE2Q96FN4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE2Q96FN4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 AC079140.4-201ENST00000507448 529 ntBASIC17.73■□□□□ 0.43
CPNE2Q96FN4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.73■□□□□ 0.43
CPNE2Q96FN4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE2Q96FN4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.72■□□□□ 0.43
CPNE2Q96FN4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms