RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
SHB-201ENST00000377707 CCDC180Q9P1Z9 1646 aa36.14■■■■□ 3.38
SHB-201ENST00000377707 SHROOM4Q9ULL8 1493 aa35.79■■■■□ 3.32
SHB-201ENST00000377707 DCAF8L2P0C7V8 631 aa35.23■■■■□ 3.23
SHB-201ENST00000377707 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
SHB-201ENST00000377707 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
SHB-201ENST00000377707 ABCC9O60706 1549 aa34.81■■■■□ 3.16
SHB-201ENST00000377707 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
SHB-201ENST00000377707 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
SHB-201ENST00000377707 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
SHB-201ENST00000377707 NACADO15069 1562 aa33.8■■■■□ 3
SHB-201ENST00000377707 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
SHB-201ENST00000377707 RB1CC1Q8TDY2 1594 aa33.56■■■□□ 2.96
SHB-201ENST00000377707 PELP1Q8IZL8 1130 aaKnown RBP33.32■■■□□ 2.93
SHB-201ENST00000377707 PCGF6Q9BYE7 350 aa33.32■■■□□ 2.92
SHB-201ENST00000377707 LOC105371045A0A1W2PR82 267 aa33.27■■■□□ 2.92
SHB-201ENST00000377707 HRCP23327 699 aa33.12■■■□□ 2.89
SHB-201ENST00000377707 PABPN1Q86U42 306 aaKnown RBP eCLIP33.05■■■□□ 2.88
SHB-201ENST00000377707 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
SHB-201ENST00000377707 PPARGC1BQ86YN6 1023 aaKnown RBP32.88■■■□□ 2.85
SHB-201ENST00000377707 CECR2Q9BXF3 1484 aa32.78■■■□□ 2.84
SHB-201ENST00000377707 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
SHB-201ENST00000377707 MYT1Q01538 1121 aa32.65■■■□□ 2.82
SHB-201ENST00000377707 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
SHB-201ENST00000377707 EHMT2Q96KQ7 1210 aa32.61■■■□□ 2.81
SHB-201ENST00000377707 FAM9AQ8IZU1 332 aaPredicted RBP32.58■■■□□ 2.81
SHB-201ENST00000377707 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
SHB-201ENST00000377707 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
SHB-201ENST00000377707 TRIM26Q12899 539 aaPredicted RBP32.29■■■□□ 2.76
SHB-201ENST00000377707 BAZ1AQ9NRL2 1556 aaPredicted RBP32.23■■■□□ 2.75
SHB-201ENST00000377707 WIZO95785 1651 aa32.19■■■□□ 2.74
SHB-201ENST00000377707 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
SHB-201ENST00000377707 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
SHB-201ENST00000377707 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.66
SHB-201ENST00000377707 TOP2AP11388 1531 aaKnown RBP31.66■■■□□ 2.66
SHB-201ENST00000377707 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
SHB-201ENST00000377707 CCDC88BA6NC98 1476 aa31.55■■■□□ 2.64
SHB-201ENST00000377707 TTBK1Q5TCY1 1321 aaPredicted RBP31.53■■■□□ 2.64
SHB-201ENST00000377707 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
SHB-201ENST00000377707 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
SHB-201ENST00000377707 ZEB1P37275 1124 aaPredicted RBP31.4■■■□□ 2.62
SHB-201ENST00000377707 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
SHB-201ENST00000377707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.34■■■□□ 2.61
SHB-201ENST00000377707 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
SHB-201ENST00000377707 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
SHB-201ENST00000377707 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
SHB-201ENST00000377707 SOGA1O94964 1423 aa31.14■■■□□ 2.58
SHB-201ENST00000377707 CCER1Q8TC90 406 aaPredicted RBP31.11■■■□□ 2.57
SHB-201ENST00000377707 RUSC2Q8N2Y8 1516 aa31.04■■■□□ 2.56
SHB-201ENST00000377707 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
SHB-201ENST00000377707 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
SHB-201ENST00000377707 CEP162Q5TB80 1403 aa30.93■■■□□ 2.54
SHB-201ENST00000377707 CSRNP3Q8WYN3 585 aa30.88■■■□□ 2.53
SHB-201ENST00000377707 SCAF1Q9H7N4 1312 aaKnown RBP30.81■■■□□ 2.52
SHB-201ENST00000377707 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
SHB-201ENST00000377707 TNIKQ9UKE5 1360 aa30.72■■■□□ 2.51
SHB-201ENST00000377707 CFTRP13569 1480 aa30.67■■■□□ 2.5
SHB-201ENST00000377707 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
SHB-201ENST00000377707 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
SHB-201ENST00000377707 NESP48681 1621 aa30.57■■■□□ 2.48
SHB-201ENST00000377707 HNRNPUL2Q1KMD3 747 aaKnown RBP30.53■■■□□ 2.48
SHB-201ENST00000377707 SYNJ1O43426 1573 aa30.53■■■□□ 2.48
SHB-201ENST00000377707 DIEXFQ68CQ4 756 aaKnown RBP30.52■■■□□ 2.48
SHB-201ENST00000377707 GOLGA3Q08378 1498 aa30.51■■■□□ 2.47
SHB-201ENST00000377707 EEA1Q15075 1411 aa30.48■■■□□ 2.47
SHB-201ENST00000377707 NEUROD1Q13562 356 aa30.44■■■□□ 2.46
SHB-201ENST00000377707 CUX1P39880 1505 aa30.32■■■□□ 2.44
SHB-201ENST00000377707 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
SHB-201ENST00000377707 PRKCSHP14314 528 aaPredicted RBP30.32■■■□□ 2.44
SHB-201ENST00000377707 CLIP1P30622 1438 aa30.31■■■□□ 2.44
SHB-201ENST00000377707 ACIN1Q9UKV3 1341 aaKnown RBP30.3■■■□□ 2.44
SHB-201ENST00000377707 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
SHB-201ENST00000377707 RAPGEF2Q9Y4G8 1499 aa30.29■■■□□ 2.44
SHB-201ENST00000377707 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
SHB-201ENST00000377707 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
SHB-201ENST00000377707 APLP2Q06481 763 aa30.17■■■□□ 2.42
SHB-201ENST00000377707 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
SHB-201ENST00000377707 ZNF316A6NFI3 1004 aaPredicted RBP30.15■■■□□ 2.42
SHB-201ENST00000377707 YTHDC1Q96MU7 727 aaKnown RBP30.15■■■□□ 2.42
SHB-201ENST00000377707 GTF3C3Q9Y5Q9 886 aa30.13■■■□□ 2.41
SHB-201ENST00000377707 KIF21BO75037 1637 aa30.13■■■□□ 2.41
SHB-201ENST00000377707 BIVM-ERCC5R4GMW8 1640 aa30.12■■■□□ 2.41
SHB-201ENST00000377707 VPS8Q8N3P4 1428 aa30.09■■■□□ 2.41
SHB-201ENST00000377707 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
SHB-201ENST00000377707 BCL11AQ9H165 835 aa30.05■■■□□ 2.4
SHB-201ENST00000377707 FGD5Q6ZNL6 1462 aa30.01■■■□□ 2.39
SHB-201ENST00000377707 CENPBP07199 599 aaPredicted RBP29.98■■■□□ 2.39
SHB-201ENST00000377707 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
SHB-201ENST00000377707 MIER1Q8N108 512 aa29.95■■■□□ 2.39
SHB-201ENST00000377707 URB2Q14146 1524 aaKnown RBP29.95■■■□□ 2.39
SHB-201ENST00000377707 KANK4Q5T7N3 995 aaPredicted RBP29.93■■■□□ 2.38
SHB-201ENST00000377707 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
SHB-201ENST00000377707 RAD54L2Q9Y4B4 1467 aa29.91■■■□□ 2.38
SHB-201ENST00000377707 DNMBPQ6XZF7 1577 aa29.88■■■□□ 2.37
SHB-201ENST00000377707 CUX2O14529 1486 aa29.87■■■□□ 2.37
SHB-201ENST00000377707 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
SHB-201ENST00000377707 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
SHB-201ENST00000377707 ITGAEP38570 1179 aa29.78■■■□□ 2.36
SHB-201ENST00000377707 ARAP1Q96P48 1450 aa29.76■■■□□ 2.36
SHB-201ENST00000377707 ERICH6Q7L0X2 663 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms