RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 NISCHQ9Y2I1 1504 aa42.93■■■■■ 4.46
CXCR3-201ENST00000373691 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.49
CXCR3-201ENST00000373691 ZCCHC6Q5VYS8 1495 aaKnown RBP36.33■■■■□ 3.41
CXCR3-201ENST00000373691 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
CXCR3-201ENST00000373691 DCAF1Q9Y4B6 1507 aa35.46■■■■□ 3.27
CXCR3-201ENST00000373691 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.22
CXCR3-201ENST00000373691 DCAF8L2P0C7V8 631 aa35.05■■■■□ 3.2
CXCR3-201ENST00000373691 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
CXCR3-201ENST00000373691 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
CXCR3-201ENST00000373691 ABCC9O60706 1549 aa34.28■■■■□ 3.08
CXCR3-201ENST00000373691 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
CXCR3-201ENST00000373691 NACADO15069 1562 aa33.99■■■■□ 3.03
CXCR3-201ENST00000373691 RSF1Q96T23 1441 aaPredicted RBP33.8■■■■□ 3
CXCR3-201ENST00000373691 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
CXCR3-201ENST00000373691 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
CXCR3-201ENST00000373691 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
CXCR3-201ENST00000373691 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
CXCR3-201ENST00000373691 WIZO95785 1651 aa33.08■■■□□ 2.89
CXCR3-201ENST00000373691 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
CXCR3-201ENST00000373691 HRCP23327 699 aa33.01■■■□□ 2.87
CXCR3-201ENST00000373691 TRIM41Q8WV44 630 aa32.95■■■□□ 2.86
CXCR3-201ENST00000373691 PCGF6Q9BYE7 350 aa32.91■■■□□ 2.86
CXCR3-201ENST00000373691 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
CXCR3-201ENST00000373691 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
CXCR3-201ENST00000373691 SMARCA4P51532 1647 aa32.76■■■□□ 2.83
CXCR3-201ENST00000373691 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
CXCR3-201ENST00000373691 TRIM26Q12899 539 aaPredicted RBP32.56■■■□□ 2.8
CXCR3-201ENST00000373691 SMARCA2P51531 1590 aa32.48■■■□□ 2.79
CXCR3-201ENST00000373691 BICRAQ9NZM4 1560 aa32.46■■■□□ 2.79
CXCR3-201ENST00000373691 FAM9AQ8IZU1 332 aaPredicted RBP32.46■■■□□ 2.79
CXCR3-201ENST00000373691 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
CXCR3-201ENST00000373691 PEG3Q9GZU2 1588 aa32.27■■■□□ 2.76
CXCR3-201ENST00000373691 ABCC8Q09428 1581 aa32.18■■■□□ 2.74
CXCR3-201ENST00000373691 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
CXCR3-201ENST00000373691 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.72
CXCR3-201ENST00000373691 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
CXCR3-201ENST00000373691 EEA1Q15075 1411 aa31.94■■■□□ 2.7
CXCR3-201ENST00000373691 ATAD2BQ9ULI0 1458 aa31.89■■■□□ 2.7
CXCR3-201ENST00000373691 ZEB1P37275 1124 aaPredicted RBP31.89■■■□□ 2.7
CXCR3-201ENST00000373691 SOGA1O94964 1423 aa31.81■■■□□ 2.68
CXCR3-201ENST00000373691 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
CXCR3-201ENST00000373691 WRNQ14191 1432 aaPredicted RBP eCLIP31.77■■■□□ 2.68
CXCR3-201ENST00000373691 TNIKQ9UKE5 1360 aa31.73■■■□□ 2.67
CXCR3-201ENST00000373691 CEP162Q5TB80 1403 aa31.68■■■□□ 2.66
CXCR3-201ENST00000373691 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
CXCR3-201ENST00000373691 CSRNP3Q8WYN3 585 aa31.65■■■□□ 2.66
CXCR3-201ENST00000373691 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
CXCR3-201ENST00000373691 GOLGA3Q08378 1498 aa31.6■■■□□ 2.65
CXCR3-201ENST00000373691 KIF21BO75037 1637 aa31.52■■■□□ 2.64
CXCR3-201ENST00000373691 HMGXB3Q12766 1538 aa31.45■■■□□ 2.63
CXCR3-201ENST00000373691 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
CXCR3-201ENST00000373691 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
CXCR3-201ENST00000373691 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
CXCR3-201ENST00000373691 UBTFP17480 764 aaKnown RBP31.36■■■□□ 2.61
CXCR3-201ENST00000373691 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
CXCR3-201ENST00000373691 CLIP1P30622 1438 aa31.13■■■□□ 2.57
CXCR3-201ENST00000373691 RAPGEF2Q9Y4G8 1499 aa31.11■■■□□ 2.57
CXCR3-201ENST00000373691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.08■■■□□ 2.57
CXCR3-201ENST00000373691 CCER1Q8TC90 406 aaPredicted RBP31.07■■■□□ 2.56
CXCR3-201ENST00000373691 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
CXCR3-201ENST00000373691 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
CXCR3-201ENST00000373691 CFTRP13569 1480 aa31.04■■■□□ 2.56
CXCR3-201ENST00000373691 CUX1P39880 1505 aa31.02■■■□□ 2.56
CXCR3-201ENST00000373691 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
CXCR3-201ENST00000373691 TTBK1Q5TCY1 1321 aaPredicted RBP30.97■■■□□ 2.55
CXCR3-201ENST00000373691 PRXQ9BXM0 1461 aa30.97■■■□□ 2.55
CXCR3-201ENST00000373691 KIF27Q86VH2 1401 aa30.83■■■□□ 2.53
CXCR3-201ENST00000373691 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
CXCR3-201ENST00000373691 APLP2Q06481 763 aa30.7■■■□□ 2.5
CXCR3-201ENST00000373691 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
CXCR3-201ENST00000373691 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
CXCR3-201ENST00000373691 RANGAP1P46060 587 aaPredicted RBP30.53■■■□□ 2.48
CXCR3-201ENST00000373691 CUX2O14529 1486 aa30.51■■■□□ 2.47
CXCR3-201ENST00000373691 HNRNPUL2Q1KMD3 747 aaKnown RBP30.49■■■□□ 2.47
CXCR3-201ENST00000373691 FGD5Q6ZNL6 1462 aa30.47■■■□□ 2.47
CXCR3-201ENST00000373691 ARHGAP35Q9NRY4 1499 aa30.46■■■□□ 2.47
CXCR3-201ENST00000373691 IGF1RP08069 1367 aa30.44■■■□□ 2.46
CXCR3-201ENST00000373691 DIEXFQ68CQ4 756 aaKnown RBP30.38■■■□□ 2.45
CXCR3-201ENST00000373691 FANCD2Q9BXW9 1451 aa30.37■■■□□ 2.45
CXCR3-201ENST00000373691 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
CXCR3-201ENST00000373691 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
CXCR3-201ENST00000373691 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
CXCR3-201ENST00000373691 ZNF316A6NFI3 1004 aaPredicted RBP30.3■■■□□ 2.44
CXCR3-201ENST00000373691 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
CXCR3-201ENST00000373691 MAP3K1Q13233 1512 aa30.27■■■□□ 2.44
CXCR3-201ENST00000373691 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
CXCR3-201ENST00000373691 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
CXCR3-201ENST00000373691 TOPBP1Q92547 1522 aa30.19■■■□□ 2.42
CXCR3-201ENST00000373691 TIAM1Q13009 1591 aa30.18■■■□□ 2.42
CXCR3-201ENST00000373691 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
CXCR3-201ENST00000373691 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
CXCR3-201ENST00000373691 DHX57Q6P158 1386 aaKnown RBP30.13■■■□□ 2.41
CXCR3-201ENST00000373691 CCNB3Q8WWL7 1395 aa30.11■■■□□ 2.41
CXCR3-201ENST00000373691 CUL7Q14999 1698 aa30.11■■■□□ 2.41
CXCR3-201ENST00000373691 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
CXCR3-201ENST00000373691 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
CXCR3-201ENST00000373691 NESP48681 1621 aa30.07■■■□□ 2.4
CXCR3-201ENST00000373691 CFAP43Q8NDM7 1665 aa30.06■■■□□ 2.4
CXCR3-201ENST00000373691 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
CXCR3-201ENST00000373691 ACIN1Q9UKV3 1341 aaKnown RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms