RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 NISCHQ9Y2I1 1504 aa42.93■■■■■ 4.46
CXCR3-201ENST00000373691 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.49
CXCR3-201ENST00000373691 ZCCHC6Q5VYS8 1495 aaKnown RBP36.33■■■■□ 3.41
CXCR3-201ENST00000373691 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
CXCR3-201ENST00000373691 DCAF1Q9Y4B6 1507 aa35.46■■■■□ 3.27
CXCR3-201ENST00000373691 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.22
CXCR3-201ENST00000373691 DCAF8L2P0C7V8 631 aa35.05■■■■□ 3.2
CXCR3-201ENST00000373691 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
CXCR3-201ENST00000373691 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
CXCR3-201ENST00000373691 ABCC9O60706 1549 aa34.28■■■■□ 3.08
CXCR3-201ENST00000373691 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
CXCR3-201ENST00000373691 NACADO15069 1562 aa33.99■■■■□ 3.03
CXCR3-201ENST00000373691 RSF1Q96T23 1441 aaPredicted RBP33.8■■■■□ 3
CXCR3-201ENST00000373691 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
CXCR3-201ENST00000373691 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
CXCR3-201ENST00000373691 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
CXCR3-201ENST00000373691 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
CXCR3-201ENST00000373691 WIZO95785 1651 aa33.08■■■□□ 2.89
CXCR3-201ENST00000373691 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
CXCR3-201ENST00000373691 HRCP23327 699 aa33.01■■■□□ 2.87
CXCR3-201ENST00000373691 TRIM41Q8WV44 630 aa32.95■■■□□ 2.86
CXCR3-201ENST00000373691 PCGF6Q9BYE7 350 aa32.91■■■□□ 2.86
CXCR3-201ENST00000373691 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
CXCR3-201ENST00000373691 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
CXCR3-201ENST00000373691 SMARCA4P51532 1647 aa32.76■■■□□ 2.83
CXCR3-201ENST00000373691 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
CXCR3-201ENST00000373691 TRIM26Q12899 539 aaPredicted RBP32.56■■■□□ 2.8
CXCR3-201ENST00000373691 SMARCA2P51531 1590 aa32.48■■■□□ 2.79
CXCR3-201ENST00000373691 BICRAQ9NZM4 1560 aa32.46■■■□□ 2.79
CXCR3-201ENST00000373691 FAM9AQ8IZU1 332 aaPredicted RBP32.46■■■□□ 2.79
CXCR3-201ENST00000373691 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
CXCR3-201ENST00000373691 PEG3Q9GZU2 1588 aa32.27■■■□□ 2.76
CXCR3-201ENST00000373691 ABCC8Q09428 1581 aa32.18■■■□□ 2.74
CXCR3-201ENST00000373691 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
CXCR3-201ENST00000373691 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.72
CXCR3-201ENST00000373691 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
CXCR3-201ENST00000373691 EEA1Q15075 1411 aa31.94■■■□□ 2.7
CXCR3-201ENST00000373691 ATAD2BQ9ULI0 1458 aa31.89■■■□□ 2.7
CXCR3-201ENST00000373691 ZEB1P37275 1124 aaPredicted RBP31.89■■■□□ 2.7
CXCR3-201ENST00000373691 SOGA1O94964 1423 aa31.81■■■□□ 2.68
CXCR3-201ENST00000373691 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
CXCR3-201ENST00000373691 WRNQ14191 1432 aaPredicted RBP eCLIP31.77■■■□□ 2.68
CXCR3-201ENST00000373691 TNIKQ9UKE5 1360 aa31.73■■■□□ 2.67
CXCR3-201ENST00000373691 CEP162Q5TB80 1403 aa31.68■■■□□ 2.66
CXCR3-201ENST00000373691 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
CXCR3-201ENST00000373691 CSRNP3Q8WYN3 585 aa31.65■■■□□ 2.66
CXCR3-201ENST00000373691 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
CXCR3-201ENST00000373691 GOLGA3Q08378 1498 aa31.6■■■□□ 2.65
CXCR3-201ENST00000373691 KIF21BO75037 1637 aa31.52■■■□□ 2.64
CXCR3-201ENST00000373691 HMGXB3Q12766 1538 aa31.45■■■□□ 2.63
CXCR3-201ENST00000373691 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
CXCR3-201ENST00000373691 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
CXCR3-201ENST00000373691 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
CXCR3-201ENST00000373691 UBTFP17480 764 aaKnown RBP31.36■■■□□ 2.61
CXCR3-201ENST00000373691 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
CXCR3-201ENST00000373691 CLIP1P30622 1438 aa31.13■■■□□ 2.57
CXCR3-201ENST00000373691 RAPGEF2Q9Y4G8 1499 aa31.11■■■□□ 2.57
CXCR3-201ENST00000373691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.08■■■□□ 2.57
CXCR3-201ENST00000373691 CCER1Q8TC90 406 aaPredicted RBP31.07■■■□□ 2.56
CXCR3-201ENST00000373691 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
CXCR3-201ENST00000373691 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
CXCR3-201ENST00000373691 CFTRP13569 1480 aa31.04■■■□□ 2.56
CXCR3-201ENST00000373691 CUX1P39880 1505 aa31.02■■■□□ 2.56
CXCR3-201ENST00000373691 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
CXCR3-201ENST00000373691 TTBK1Q5TCY1 1321 aaPredicted RBP30.97■■■□□ 2.55
CXCR3-201ENST00000373691 PRXQ9BXM0 1461 aa30.97■■■□□ 2.55
CXCR3-201ENST00000373691 KIF27Q86VH2 1401 aa30.83■■■□□ 2.53
CXCR3-201ENST00000373691 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
CXCR3-201ENST00000373691 APLP2Q06481 763 aa30.7■■■□□ 2.5
CXCR3-201ENST00000373691 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
CXCR3-201ENST00000373691 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
CXCR3-201ENST00000373691 RANGAP1P46060 587 aaPredicted RBP30.53■■■□□ 2.48
CXCR3-201ENST00000373691 CUX2O14529 1486 aa30.51■■■□□ 2.47
CXCR3-201ENST00000373691 HNRNPUL2Q1KMD3 747 aaKnown RBP30.49■■■□□ 2.47
CXCR3-201ENST00000373691 FGD5Q6ZNL6 1462 aa30.47■■■□□ 2.47
CXCR3-201ENST00000373691 ARHGAP35Q9NRY4 1499 aa30.46■■■□□ 2.47
CXCR3-201ENST00000373691 IGF1RP08069 1367 aa30.44■■■□□ 2.46
CXCR3-201ENST00000373691 DIEXFQ68CQ4 756 aaKnown RBP30.38■■■□□ 2.45
CXCR3-201ENST00000373691 FANCD2Q9BXW9 1451 aa30.37■■■□□ 2.45
CXCR3-201ENST00000373691 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
CXCR3-201ENST00000373691 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
CXCR3-201ENST00000373691 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
CXCR3-201ENST00000373691 ZNF316A6NFI3 1004 aaPredicted RBP30.3■■■□□ 2.44
CXCR3-201ENST00000373691 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
CXCR3-201ENST00000373691 MAP3K1Q13233 1512 aa30.27■■■□□ 2.44
CXCR3-201ENST00000373691 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
CXCR3-201ENST00000373691 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
CXCR3-201ENST00000373691 TOPBP1Q92547 1522 aa30.19■■■□□ 2.42
CXCR3-201ENST00000373691 TIAM1Q13009 1591 aa30.18■■■□□ 2.42
CXCR3-201ENST00000373691 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
CXCR3-201ENST00000373691 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
CXCR3-201ENST00000373691 DHX57Q6P158 1386 aaKnown RBP30.13■■■□□ 2.41
CXCR3-201ENST00000373691 CCNB3Q8WWL7 1395 aa30.11■■■□□ 2.41
CXCR3-201ENST00000373691 CUL7Q14999 1698 aa30.11■■■□□ 2.41
CXCR3-201ENST00000373691 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
CXCR3-201ENST00000373691 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
CXCR3-201ENST00000373691 NESP48681 1621 aa30.07■■■□□ 2.4
CXCR3-201ENST00000373691 CFAP43Q8NDM7 1665 aa30.06■■■□□ 2.4
CXCR3-201ENST00000373691 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
CXCR3-201ENST00000373691 ACIN1Q9UKV3 1341 aaKnown RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms