RNA–Protein interactions for RNA: ENST00000340587.7

LHX6-201, Transcript of LIM homeobox 6, humanhuman

TSL 1 (best) BASIC

Gene LHX6, Length 3,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6-201ENST00000340587 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
LHX6-201ENST00000340587 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
LHX6-201ENST00000340587 SUPT5HO00267 1087 aaKnown RBP34.75■■■■□ 3.15
LHX6-201ENST00000340587 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
LHX6-201ENST00000340587 ZCCHC6Q5VYS8 1495 aaKnown RBP34.2■■■■□ 3.07
LHX6-201ENST00000340587 CCDC180Q9P1Z9 1646 aa34.09■■■■□ 3.05
LHX6-201ENST00000340587 CHIC1Q5VXU3 224 aa33.47■■■□□ 2.95
LHX6-201ENST00000340587 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
LHX6-201ENST00000340587 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
LHX6-201ENST00000340587 HRCP23327 699 aa32.88■■■□□ 2.85
LHX6-201ENST00000340587 PCGF6Q9BYE7 350 aa32.83■■■□□ 2.85
LHX6-201ENST00000340587 LOC105371045A0A1W2PR82 267 aa32.7■■■□□ 2.82
LHX6-201ENST00000340587 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
LHX6-201ENST00000340587 PPARGC1BQ86YN6 1023 aaKnown RBP32.29■■■□□ 2.76
LHX6-201ENST00000340587 ABCC9O60706 1549 aa32.25■■■□□ 2.75
LHX6-201ENST00000340587 TRIM41Q8WV44 630 aa32.22■■■□□ 2.75
LHX6-201ENST00000340587 FAM9AQ8IZU1 332 aaPredicted RBP32.21■■■□□ 2.75
LHX6-201ENST00000340587 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
LHX6-201ENST00000340587 EHMT2Q96KQ7 1210 aa32.15■■■□□ 2.74
LHX6-201ENST00000340587 TRIM26Q12899 539 aaPredicted RBP31.95■■■□□ 2.71
LHX6-201ENST00000340587 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
LHX6-201ENST00000340587 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
LHX6-201ENST00000340587 NACADO15069 1562 aa31.7■■■□□ 2.66
LHX6-201ENST00000340587 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
LHX6-201ENST00000340587 WIZO95785 1651 aa31.39■■■□□ 2.61
LHX6-201ENST00000340587 ZEB1P37275 1124 aaPredicted RBP31.28■■■□□ 2.6
LHX6-201ENST00000340587 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
LHX6-201ENST00000340587 TTBK1Q5TCY1 1321 aaPredicted RBP31.1■■■□□ 2.57
LHX6-201ENST00000340587 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.56
LHX6-201ENST00000340587 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
LHX6-201ENST00000340587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.87■■■□□ 2.53
LHX6-201ENST00000340587 PELP1Q8IZL8 1130 aaKnown RBP30.86■■■□□ 2.53
LHX6-201ENST00000340587 CCER1Q8TC90 406 aaPredicted RBP30.85■■■□□ 2.53
LHX6-201ENST00000340587 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
LHX6-201ENST00000340587 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
LHX6-201ENST00000340587 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
LHX6-201ENST00000340587 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
LHX6-201ENST00000340587 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
LHX6-201ENST00000340587 SOGA1O94964 1423 aa30.67■■■□□ 2.5
LHX6-201ENST00000340587 EIF4G1Q04637 1599 aaKnown RBP30.66■■■□□ 2.5
LHX6-201ENST00000340587 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
LHX6-201ENST00000340587 CSRNP3Q8WYN3 585 aa30.63■■■□□ 2.49
LHX6-201ENST00000340587 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
LHX6-201ENST00000340587 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
LHX6-201ENST00000340587 RUSC2Q8N2Y8 1516 aa30.47■■■□□ 2.47
LHX6-201ENST00000340587 RANGAP1P46060 587 aaPredicted RBP30.44■■■□□ 2.46
LHX6-201ENST00000340587 TNIKQ9UKE5 1360 aa30.43■■■□□ 2.46
LHX6-201ENST00000340587 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
LHX6-201ENST00000340587 EEA1Q15075 1411 aa30.35■■■□□ 2.45
LHX6-201ENST00000340587 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.44
LHX6-201ENST00000340587 GOLGA3Q08378 1498 aa30.26■■■□□ 2.43
LHX6-201ENST00000340587 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
LHX6-201ENST00000340587 HNRNPUL2Q1KMD3 747 aaKnown RBP30.21■■■□□ 2.43
LHX6-201ENST00000340587 APLP2Q06481 763 aa30.21■■■□□ 2.43
LHX6-201ENST00000340587 NEUROD1Q13562 356 aa30.2■■■□□ 2.42
LHX6-201ENST00000340587 DIEXFQ68CQ4 756 aaKnown RBP30.16■■■□□ 2.42
LHX6-201ENST00000340587 BAZ1BQ9UIG0 1483 aaKnown RBP30.14■■■□□ 2.42
LHX6-201ENST00000340587 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
LHX6-201ENST00000340587 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
LHX6-201ENST00000340587 CLIP1P30622 1438 aa30.04■■■□□ 2.4
LHX6-201ENST00000340587 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
LHX6-201ENST00000340587 CENPBP07199 599 aaPredicted RBP30.02■■■□□ 2.4
LHX6-201ENST00000340587 GTF3C3Q9Y5Q9 886 aa30.01■■■□□ 2.4
LHX6-201ENST00000340587 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
LHX6-201ENST00000340587 RAPGEF2Q9Y4G8 1499 aa29.86■■■□□ 2.37
LHX6-201ENST00000340587 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
LHX6-201ENST00000340587 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
LHX6-201ENST00000340587 KIF21BO75037 1637 aa29.77■■■□□ 2.36
LHX6-201ENST00000340587 YTHDC1Q96MU7 727 aaKnown RBP29.75■■■□□ 2.35
LHX6-201ENST00000340587 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
LHX6-201ENST00000340587 ITGAEP38570 1179 aa29.51■■■□□ 2.31
LHX6-201ENST00000340587 KANK4Q5T7N3 995 aaPredicted RBP29.48■■■□□ 2.31
LHX6-201ENST00000340587 MYT1Q01538 1121 aa29.47■■■□□ 2.31
LHX6-201ENST00000340587 MIER1Q8N108 512 aa29.46■■■□□ 2.31
LHX6-201ENST00000340587 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
LHX6-201ENST00000340587 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
LHX6-201ENST00000340587 PRXQ9BXM0 1461 aa29.39■■■□□ 2.3
LHX6-201ENST00000340587 CUX1P39880 1505 aa29.36■■■□□ 2.29
LHX6-201ENST00000340587 BIVM-ERCC5R4GMW8 1640 aa29.33■■■□□ 2.29
LHX6-201ENST00000340587 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
LHX6-201ENST00000340587 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
LHX6-201ENST00000340587 ATP1B4Q9UN42 357 aaPredicted RBP29.3■■■□□ 2.28
LHX6-201ENST00000340587 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
LHX6-201ENST00000340587 CFTRP13569 1480 aa29.23■■■□□ 2.27
LHX6-201ENST00000340587 CUX2O14529 1486 aa29.2■■■□□ 2.27
LHX6-201ENST00000340587 DHX57Q6P158 1386 aaKnown RBP29.19■■■□□ 2.26
LHX6-201ENST00000340587 P3H3Q8IVL6 736 aa29.18■■■□□ 2.26
LHX6-201ENST00000340587 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
LHX6-201ENST00000340587 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
LHX6-201ENST00000340587 ARHGAP35Q9NRY4 1499 aa29.1■■■□□ 2.25
LHX6-201ENST00000340587 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
LHX6-201ENST00000340587 IGF1RP08069 1367 aa29.07■■■□□ 2.24
LHX6-201ENST00000340587 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
LHX6-201ENST00000340587 CADPSQ9ULU8 1353 aa29.04■■■□□ 2.24
LHX6-201ENST00000340587 RRBP1Q9P2E9 1410 aaKnown RBP29■■■□□ 2.23
LHX6-201ENST00000340587 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
LHX6-201ENST00000340587 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
LHX6-201ENST00000340587 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
LHX6-201ENST00000340587 SIN3AQ96ST3 1273 aa28.76■■■□□ 2.19
LHX6-201ENST00000340587 PHLDB1Q86UU1 1377 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms