RNA–Protein interactions for RNA: ENST00000340587.7

LHX6-201, Transcript of LIM homeobox 6, humanhuman

TSL 1 (best) BASIC

Gene LHX6, Length 3,457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6-201ENST00000340587 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
LHX6-201ENST00000340587 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
LHX6-201ENST00000340587 SUPT5HO00267 1087 aaKnown RBP34.75■■■■□ 3.15
LHX6-201ENST00000340587 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
LHX6-201ENST00000340587 ZCCHC6Q5VYS8 1495 aaKnown RBP34.2■■■■□ 3.07
LHX6-201ENST00000340587 CCDC180Q9P1Z9 1646 aa34.09■■■■□ 3.05
LHX6-201ENST00000340587 CHIC1Q5VXU3 224 aa33.47■■■□□ 2.95
LHX6-201ENST00000340587 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
LHX6-201ENST00000340587 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
LHX6-201ENST00000340587 HRCP23327 699 aa32.88■■■□□ 2.85
LHX6-201ENST00000340587 PCGF6Q9BYE7 350 aa32.83■■■□□ 2.85
LHX6-201ENST00000340587 LOC105371045A0A1W2PR82 267 aa32.7■■■□□ 2.82
LHX6-201ENST00000340587 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
LHX6-201ENST00000340587 PPARGC1BQ86YN6 1023 aaKnown RBP32.29■■■□□ 2.76
LHX6-201ENST00000340587 ABCC9O60706 1549 aa32.25■■■□□ 2.75
LHX6-201ENST00000340587 TRIM41Q8WV44 630 aa32.22■■■□□ 2.75
LHX6-201ENST00000340587 FAM9AQ8IZU1 332 aaPredicted RBP32.21■■■□□ 2.75
LHX6-201ENST00000340587 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
LHX6-201ENST00000340587 EHMT2Q96KQ7 1210 aa32.15■■■□□ 2.74
LHX6-201ENST00000340587 TRIM26Q12899 539 aaPredicted RBP31.95■■■□□ 2.71
LHX6-201ENST00000340587 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
LHX6-201ENST00000340587 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
LHX6-201ENST00000340587 NACADO15069 1562 aa31.7■■■□□ 2.66
LHX6-201ENST00000340587 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
LHX6-201ENST00000340587 WIZO95785 1651 aa31.39■■■□□ 2.61
LHX6-201ENST00000340587 ZEB1P37275 1124 aaPredicted RBP31.28■■■□□ 2.6
LHX6-201ENST00000340587 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
LHX6-201ENST00000340587 TTBK1Q5TCY1 1321 aaPredicted RBP31.1■■■□□ 2.57
LHX6-201ENST00000340587 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.56
LHX6-201ENST00000340587 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
LHX6-201ENST00000340587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.87■■■□□ 2.53
LHX6-201ENST00000340587 PELP1Q8IZL8 1130 aaKnown RBP30.86■■■□□ 2.53
LHX6-201ENST00000340587 CCER1Q8TC90 406 aaPredicted RBP30.85■■■□□ 2.53
LHX6-201ENST00000340587 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
LHX6-201ENST00000340587 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
LHX6-201ENST00000340587 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
LHX6-201ENST00000340587 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
LHX6-201ENST00000340587 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
LHX6-201ENST00000340587 SOGA1O94964 1423 aa30.67■■■□□ 2.5
LHX6-201ENST00000340587 EIF4G1Q04637 1599 aaKnown RBP30.66■■■□□ 2.5
LHX6-201ENST00000340587 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
LHX6-201ENST00000340587 CSRNP3Q8WYN3 585 aa30.63■■■□□ 2.49
LHX6-201ENST00000340587 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
LHX6-201ENST00000340587 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
LHX6-201ENST00000340587 RUSC2Q8N2Y8 1516 aa30.47■■■□□ 2.47
LHX6-201ENST00000340587 RANGAP1P46060 587 aaPredicted RBP30.44■■■□□ 2.46
LHX6-201ENST00000340587 TNIKQ9UKE5 1360 aa30.43■■■□□ 2.46
LHX6-201ENST00000340587 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
LHX6-201ENST00000340587 EEA1Q15075 1411 aa30.35■■■□□ 2.45
LHX6-201ENST00000340587 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.44
LHX6-201ENST00000340587 GOLGA3Q08378 1498 aa30.26■■■□□ 2.43
LHX6-201ENST00000340587 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
LHX6-201ENST00000340587 HNRNPUL2Q1KMD3 747 aaKnown RBP30.21■■■□□ 2.43
LHX6-201ENST00000340587 APLP2Q06481 763 aa30.21■■■□□ 2.43
LHX6-201ENST00000340587 NEUROD1Q13562 356 aa30.2■■■□□ 2.42
LHX6-201ENST00000340587 DIEXFQ68CQ4 756 aaKnown RBP30.16■■■□□ 2.42
LHX6-201ENST00000340587 BAZ1BQ9UIG0 1483 aaKnown RBP30.14■■■□□ 2.42
LHX6-201ENST00000340587 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
LHX6-201ENST00000340587 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
LHX6-201ENST00000340587 CLIP1P30622 1438 aa30.04■■■□□ 2.4
LHX6-201ENST00000340587 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
LHX6-201ENST00000340587 CENPBP07199 599 aaPredicted RBP30.02■■■□□ 2.4
LHX6-201ENST00000340587 GTF3C3Q9Y5Q9 886 aa30.01■■■□□ 2.4
LHX6-201ENST00000340587 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
LHX6-201ENST00000340587 RAPGEF2Q9Y4G8 1499 aa29.86■■■□□ 2.37
LHX6-201ENST00000340587 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
LHX6-201ENST00000340587 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
LHX6-201ENST00000340587 KIF21BO75037 1637 aa29.77■■■□□ 2.36
LHX6-201ENST00000340587 YTHDC1Q96MU7 727 aaKnown RBP29.75■■■□□ 2.35
LHX6-201ENST00000340587 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
LHX6-201ENST00000340587 ITGAEP38570 1179 aa29.51■■■□□ 2.31
LHX6-201ENST00000340587 KANK4Q5T7N3 995 aaPredicted RBP29.48■■■□□ 2.31
LHX6-201ENST00000340587 MYT1Q01538 1121 aa29.47■■■□□ 2.31
LHX6-201ENST00000340587 MIER1Q8N108 512 aa29.46■■■□□ 2.31
LHX6-201ENST00000340587 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
LHX6-201ENST00000340587 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
LHX6-201ENST00000340587 PRXQ9BXM0 1461 aa29.39■■■□□ 2.3
LHX6-201ENST00000340587 CUX1P39880 1505 aa29.36■■■□□ 2.29
LHX6-201ENST00000340587 BIVM-ERCC5R4GMW8 1640 aa29.33■■■□□ 2.29
LHX6-201ENST00000340587 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
LHX6-201ENST00000340587 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
LHX6-201ENST00000340587 ATP1B4Q9UN42 357 aaPredicted RBP29.3■■■□□ 2.28
LHX6-201ENST00000340587 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
LHX6-201ENST00000340587 CFTRP13569 1480 aa29.23■■■□□ 2.27
LHX6-201ENST00000340587 CUX2O14529 1486 aa29.2■■■□□ 2.27
LHX6-201ENST00000340587 DHX57Q6P158 1386 aaKnown RBP29.19■■■□□ 2.26
LHX6-201ENST00000340587 P3H3Q8IVL6 736 aa29.18■■■□□ 2.26
LHX6-201ENST00000340587 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
LHX6-201ENST00000340587 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
LHX6-201ENST00000340587 ARHGAP35Q9NRY4 1499 aa29.1■■■□□ 2.25
LHX6-201ENST00000340587 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
LHX6-201ENST00000340587 IGF1RP08069 1367 aa29.07■■■□□ 2.24
LHX6-201ENST00000340587 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
LHX6-201ENST00000340587 CADPSQ9ULU8 1353 aa29.04■■■□□ 2.24
LHX6-201ENST00000340587 RRBP1Q9P2E9 1410 aaKnown RBP29■■■□□ 2.23
LHX6-201ENST00000340587 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
LHX6-201ENST00000340587 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
LHX6-201ENST00000340587 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
LHX6-201ENST00000340587 SIN3AQ96ST3 1273 aa28.76■■■□□ 2.19
LHX6-201ENST00000340587 PHLDB1Q86UU1 1377 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms