RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
SMARCD1-201ENST00000381513 HRCP23327 699 aa32.24■■■□□ 2.75
SMARCD1-201ENST00000381513 PELP1Q8IZL8 1130 aaKnown RBP31.89■■■□□ 2.7
SMARCD1-201ENST00000381513 PPARGC1BQ86YN6 1023 aaKnown RBP31.76■■■□□ 2.67
SMARCD1-201ENST00000381513 PCGF6Q9BYE7 350 aa31.6■■■□□ 2.65
SMARCD1-201ENST00000381513 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
SMARCD1-201ENST00000381513 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
SMARCD1-201ENST00000381513 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
SMARCD1-201ENST00000381513 MYT1Q01538 1121 aa30.77■■■□□ 2.52
SMARCD1-201ENST00000381513 MYO15BQ96JP2 1530 aa30.67■■■□□ 2.5
SMARCD1-201ENST00000381513 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
SMARCD1-201ENST00000381513 TRIM26Q12899 539 aaPredicted RBP30.22■■■□□ 2.43
SMARCD1-201ENST00000381513 ZEB1P37275 1124 aaPredicted RBP30.14■■■□□ 2.42
SMARCD1-201ENST00000381513 LOC105371045A0A1W2PR82 267 aa30.1■■■□□ 2.41
SMARCD1-201ENST00000381513 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
SMARCD1-201ENST00000381513 ACIN1Q9UKV3 1341 aaKnown RBP29.94■■■□□ 2.38
SMARCD1-201ENST00000381513 NEUROD1Q13562 356 aa29.88■■■□□ 2.37
SMARCD1-201ENST00000381513 GTF3C3Q9Y5Q9 886 aa29.85■■■□□ 2.37
SMARCD1-201ENST00000381513 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
SMARCD1-201ENST00000381513 CENPBP07199 599 aaPredicted RBP29.63■■■□□ 2.33
SMARCD1-201ENST00000381513 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
SMARCD1-201ENST00000381513 YTHDC1Q96MU7 727 aaKnown RBP29.1■■■□□ 2.25
SMARCD1-201ENST00000381513 CCER1Q8TC90 406 aaPredicted RBP29.09■■■□□ 2.25
SMARCD1-201ENST00000381513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
SMARCD1-201ENST00000381513 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
SMARCD1-201ENST00000381513 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.24
SMARCD1-201ENST00000381513 FAM9AQ8IZU1 332 aaPredicted RBP28.95■■■□□ 2.22
SMARCD1-201ENST00000381513 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
SMARCD1-201ENST00000381513 BCL11AQ9H165 835 aa28.86■■■□□ 2.21
SMARCD1-201ENST00000381513 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
SMARCD1-201ENST00000381513 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
SMARCD1-201ENST00000381513 ANP32EQ9BTT0 268 aa28.51■■■□□ 2.15
SMARCD1-201ENST00000381513 ZNF316A6NFI3 1004 aaPredicted RBP28.48■■■□□ 2.15
SMARCD1-201ENST00000381513 MIER1Q8N108 512 aa28.42■■■□□ 2.14
SMARCD1-201ENST00000381513 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
SMARCD1-201ENST00000381513 TSHZ2Q9NRE2 1034 aa28.17■■■□□ 2.1
SMARCD1-201ENST00000381513 SUPT16HQ9Y5B9 1047 aaKnown RBP28.16■■■□□ 2.1
SMARCD1-201ENST00000381513 PRKCSHP14314 528 aaPredicted RBP27.98■■■□□ 2.07
SMARCD1-201ENST00000381513 CLSPNQ9HAW4 1339 aa27.9■■■□□ 2.06
SMARCD1-201ENST00000381513 BCANQ96GW7 911 aa27.82■■■□□ 2.04
SMARCD1-201ENST00000381513 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
SMARCD1-201ENST00000381513 RBM19Q9Y4C8 960 aaKnown RBP27.52■■■□□ 2
SMARCD1-201ENST00000381513 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
SMARCD1-201ENST00000381513 FKBP8Q14318 412 aa27.48■■□□□ 1.99
SMARCD1-201ENST00000381513 ERICH6Q7L0X2 663 aa27.43■■□□□ 1.98
SMARCD1-201ENST00000381513 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
SMARCD1-201ENST00000381513 ABCC9O60706 1549 aa27.33■■□□□ 1.97
SMARCD1-201ENST00000381513 ITGAEP38570 1179 aa27.32■■□□□ 1.96
SMARCD1-201ENST00000381513 NEFLP07196 543 aa27.31■■□□□ 1.96
SMARCD1-201ENST00000381513 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
SMARCD1-201ENST00000381513 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
SMARCD1-201ENST00000381513 UBTFP17480 764 aaKnown RBP27.26■■□□□ 1.95
SMARCD1-201ENST00000381513 MSH5O43196 834 aa27.24■■□□□ 1.95
SMARCD1-201ENST00000381513 KCNH8Q96L42 1107 aa27.23■■□□□ 1.95
SMARCD1-201ENST00000381513 ANO8Q9HCE9 1232 aaPredicted RBP27.09■■□□□ 1.93
SMARCD1-201ENST00000381513 DEKP35659 375 aaKnown RBP27.05■■□□□ 1.92
SMARCD1-201ENST00000381513 APLP2Q06481 763 aa26.97■■□□□ 1.91
SMARCD1-201ENST00000381513 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
SMARCD1-201ENST00000381513 TRIM52Q96A61 297 aa26.92■■□□□ 1.9
SMARCD1-201ENST00000381513 MYT1LQ9UL68 1186 aa26.91■■□□□ 1.9
SMARCD1-201ENST00000381513 CDK11AQ9UQ88 783 aaPredicted RBP26.89■■□□□ 1.9
SMARCD1-201ENST00000381513 FANCIQ9NVI1 1328 aa26.87■■□□□ 1.89
SMARCD1-201ENST00000381513 NBR1Q14596 966 aa26.8■■□□□ 1.88
SMARCD1-201ENST00000381513 RANGAP1P46060 587 aaPredicted RBP26.79■■□□□ 1.88
SMARCD1-201ENST00000381513 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
SMARCD1-201ENST00000381513 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
SMARCD1-201ENST00000381513 SALL2Q9Y467 1007 aaPredicted RBP26.77■■□□□ 1.88
SMARCD1-201ENST00000381513 CCDC136Q96JN2 1154 aa26.75■■□□□ 1.87
SMARCD1-201ENST00000381513 IRX6P78412 446 aaPredicted RBP26.75■■□□□ 1.87
SMARCD1-201ENST00000381513 SOGA1O94964 1423 aa26.74■■□□□ 1.87
SMARCD1-201ENST00000381513 DHX57Q6P158 1386 aaKnown RBP26.73■■□□□ 1.87
SMARCD1-201ENST00000381513 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
SMARCD1-201ENST00000381513 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
SMARCD1-201ENST00000381513 RTN4Q9NQC3 1192 aaKnown RBP26.6■■□□□ 1.85
SMARCD1-201ENST00000381513 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
SMARCD1-201ENST00000381513 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.54■■□□□ 1.84
SMARCD1-201ENST00000381513 ANP32CO43423 234 aa26.52■■□□□ 1.84
SMARCD1-201ENST00000381513 GOLGA3Q08378 1498 aa26.52■■□□□ 1.84
SMARCD1-201ENST00000381513 RUSC2Q8N2Y8 1516 aa26.52■■□□□ 1.84
SMARCD1-201ENST00000381513 ERICH6BQ5W0A0 696 aa26.51■■□□□ 1.83
SMARCD1-201ENST00000381513 RTL5Q5HYW3 569 aaPredicted RBP26.5■■□□□ 1.83
SMARCD1-201ENST00000381513 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
SMARCD1-201ENST00000381513 NOP58Q9Y2X3 529 aaKnown RBP26.5■■□□□ 1.83
SMARCD1-201ENST00000381513 HIRIP3Q9BW71 556 aaPredicted RBP26.48■■□□□ 1.83
SMARCD1-201ENST00000381513 CLIP1P30622 1438 aa26.48■■□□□ 1.83
SMARCD1-201ENST00000381513 IL27Q8NEV9 243 aa26.45■■□□□ 1.82
SMARCD1-201ENST00000381513 EEA1Q15075 1411 aa26.4■■□□□ 1.82
SMARCD1-201ENST00000381513 PAK3O75914 559 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-201ENST00000381513 HNRNPUQ00839 825 aaKnown RBP eCLIP26.4■■□□□ 1.82
SMARCD1-201ENST00000381513 WIZO95785 1651 aa26.39■■□□□ 1.82
SMARCD1-201ENST00000381513 VPS8Q8N3P4 1428 aa26.38■■□□□ 1.81
SMARCD1-201ENST00000381513 CCER2I3L3R5 266 aa26.36■■□□□ 1.81
SMARCD1-201ENST00000381513 B4GALNT3Q6L9W6 998 aa26.31■■□□□ 1.8
SMARCD1-201ENST00000381513 PPP1R15AO75807 674 aaPredicted RBP26.29■■□□□ 1.8
SMARCD1-201ENST00000381513 PPP4R2Q9NY27 417 aa26.29■■□□□ 1.8
SMARCD1-201ENST00000381513 UBE2Q2Q8WVN8 375 aa26.27■■□□□ 1.8
SMARCD1-201ENST00000381513 EIF5BO60841 1220 aaKnown RBP26.24■■□□□ 1.79
SMARCD1-201ENST00000381513 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
SMARCD1-201ENST00000381513 SIN3AQ96ST3 1273 aa26.2■■□□□ 1.78
SMARCD1-201ENST00000381513 ANP32AP39687 249 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms