RNA–Protein interactions for RNA: ENST00000452765.6

SH3BP2-204, Transcript of SH3 domain binding protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH3BP2, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-204ENST00000452765 NISCHQ9Y2I1 1504 aa47.99■■■■■ 5.27
SH3BP2-204ENST00000452765 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.28
SH3BP2-204ENST00000452765 ZCCHC6Q5VYS8 1495 aaKnown RBP40.21■■■■■ 4.03
SH3BP2-204ENST00000452765 ABCC9O60706 1549 aa40.18■■■■■ 4.02
SH3BP2-204ENST00000452765 DCAF8L2P0C7V8 631 aa40.11■■■■■ 4.01
SH3BP2-204ENST00000452765 DCAF1Q9Y4B6 1507 aa39.48■■■■□ 3.91
SH3BP2-204ENST00000452765 SHROOM4Q9ULL8 1493 aa39.3■■■■□ 3.88
SH3BP2-204ENST00000452765 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
SH3BP2-204ENST00000452765 NACADO15069 1562 aa39.06■■■■□ 3.84
SH3BP2-204ENST00000452765 RB1CC1Q8TDY2 1594 aa38.84■■■■□ 3.81
SH3BP2-204ENST00000452765 SCRIBQ14160 1630 aa38.71■■■■□ 3.79
SH3BP2-204ENST00000452765 UNC13AQ9UPW8 1703 aa38.22■■■■□ 3.71
SH3BP2-204ENST00000452765 PABPN1Q86U42 306 aaKnown RBP eCLIP37.95■■■■□ 3.671e-6■■□□□ 13.4
SH3BP2-204ENST00000452765 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
SH3BP2-204ENST00000452765 SUPT5HO00267 1087 aaKnown RBP37.63■■■■□ 3.61
SH3BP2-204ENST00000452765 CECR2Q9BXF3 1484 aa37.5■■■■□ 3.59
SH3BP2-204ENST00000452765 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
SH3BP2-204ENST00000452765 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
SH3BP2-204ENST00000452765 BAZ1AQ9NRL2 1556 aaPredicted RBP37.02■■■■□ 3.52
SH3BP2-204ENST00000452765 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
SH3BP2-204ENST00000452765 WIZO95785 1651 aa36.88■■■■□ 3.5
SH3BP2-204ENST00000452765 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
SH3BP2-204ENST00000452765 ATAD2BQ9ULI0 1458 aa36.45■■■■□ 3.43
SH3BP2-204ENST00000452765 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
SH3BP2-204ENST00000452765 TOP2AP11388 1531 aaKnown RBP36.32■■■■□ 3.4
SH3BP2-204ENST00000452765 SMARCA2P51531 1590 aa36.31■■■■□ 3.4
SH3BP2-204ENST00000452765 CC2D2AQ9P2K1 1620 aa36.25■■■■□ 3.39
SH3BP2-204ENST00000452765 BAZ1BQ9UIG0 1483 aaKnown RBP36.22■■■■□ 3.39
SH3BP2-204ENST00000452765 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
SH3BP2-204ENST00000452765 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
SH3BP2-204ENST00000452765 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
SH3BP2-204ENST00000452765 DNAJC5BQ9UF47 199 aa35.88■■■■□ 3.34
SH3BP2-204ENST00000452765 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
SH3BP2-204ENST00000452765 ABCC8Q09428 1581 aa35.32■■■■□ 3.24
SH3BP2-204ENST00000452765 CFTRP13569 1480 aa35.26■■■■□ 3.24
SH3BP2-204ENST00000452765 TRIM41Q8WV44 630 aa35.25■■■■□ 3.23
SH3BP2-204ENST00000452765 CADPSQ9ULU8 1353 aa35.23■■■■□ 3.23
SH3BP2-204ENST00000452765 NESP48681 1621 aa35.21■■■■□ 3.23
SH3BP2-204ENST00000452765 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
SH3BP2-204ENST00000452765 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
SH3BP2-204ENST00000452765 SYNJ1O43426 1573 aa34.91■■■■□ 3.18
SH3BP2-204ENST00000452765 LAMC3Q9Y6N6 1575 aa34.9■■■■□ 3.18
SH3BP2-204ENST00000452765 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
SH3BP2-204ENST00000452765 FAM9AQ8IZU1 332 aaPredicted RBP34.81■■■■□ 3.16
SH3BP2-204ENST00000452765 CUX1P39880 1505 aa34.75■■■■□ 3.15
SH3BP2-204ENST00000452765 PDS5BQ9NTI5 1447 aa34.69■■■■□ 3.14
SH3BP2-204ENST00000452765 KIF21AQ7Z4S6 1674 aa34.68■■■■□ 3.14
SH3BP2-204ENST00000452765 TOP2BQ02880 1626 aa34.67■■■■□ 3.14
SH3BP2-204ENST00000452765 CEP164Q9UPV0 1460 aa34.63■■■■□ 3.13
SH3BP2-204ENST00000452765 BIVM-ERCC5R4GMW8 1640 aa34.61■■■■□ 3.13
SH3BP2-204ENST00000452765 SOGA1O94964 1423 aa34.58■■■■□ 3.13
SH3BP2-204ENST00000452765 LOC105371045A0A1W2PR82 267 aa34.54■■■■□ 3.12
SH3BP2-204ENST00000452765 RUSC2Q8N2Y8 1516 aa34.54■■■■□ 3.12
SH3BP2-204ENST00000452765 EHMT2Q96KQ7 1210 aa34.51■■■■□ 3.11
SH3BP2-204ENST00000452765 URB2Q14146 1524 aaKnown RBP34.5■■■■□ 3.11
SH3BP2-204ENST00000452765 TOPBP1Q92547 1522 aa34.46■■■■□ 3.11
SH3BP2-204ENST00000452765 DNMBPQ6XZF7 1577 aa34.42■■■■□ 3.1
SH3BP2-204ENST00000452765 FGD5Q6ZNL6 1462 aa34.41■■■■□ 3.1
SH3BP2-204ENST00000452765 ERCC6Q03468 1493 aa34.38■■■■□ 3.09
SH3BP2-204ENST00000452765 POLA1P09884 1462 aaPredicted RBP34.28■■■■□ 3.08
SH3BP2-204ENST00000452765 RAD54L2Q9Y4B4 1467 aa34.28■■■■□ 3.08
SH3BP2-204ENST00000452765 MRC2Q9UBG0 1479 aa34.27■■■■□ 3.08
SH3BP2-204ENST00000452765 CSRNP3Q8WYN3 585 aa34.21■■■■□ 3.07
SH3BP2-204ENST00000452765 CUX2O14529 1486 aa34.15■■■■□ 3.06
SH3BP2-204ENST00000452765 EEA1Q15075 1411 aa34.12■■■■□ 3.05
SH3BP2-204ENST00000452765 THOC2Q8NI27 1593 aaKnown RBP34.1■■■■□ 3.05
SH3BP2-204ENST00000452765 WDR62O43379 1518 aa34.09■■■■□ 3.05
SH3BP2-204ENST00000452765 KIF27Q86VH2 1401 aa34.07■■■■□ 3.04
SH3BP2-204ENST00000452765 ABCA10Q8WWZ4 1543 aa34.01■■■■□ 3.03
SH3BP2-204ENST00000452765 TDRD9Q8NDG6 1382 aaKnown RBP33.99■■■■□ 3.03
SH3BP2-204ENST00000452765 TARBP1Q13395 1621 aaKnown RBP33.95■■■■□ 3.02
SH3BP2-204ENST00000452765 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
SH3BP2-204ENST00000452765 IGF1RP08069 1367 aa33.9■■■■□ 3.02
SH3BP2-204ENST00000452765 RAPGEF2Q9Y4G8 1499 aa33.85■■■■□ 3.01
SH3BP2-204ENST00000452765 UBTFP17480 764 aaKnown RBP33.84■■■■□ 3.01
SH3BP2-204ENST00000452765 ZNF608Q9ULD9 1512 aaPredicted RBP33.82■■■■□ 3
SH3BP2-204ENST00000452765 AQRO60306 1485 aaKnown RBP eCLIP33.82■■■■□ 3
SH3BP2-204ENST00000452765 KIF21BO75037 1637 aa33.78■■■■□ 3
SH3BP2-204ENST00000452765 PRXQ9BXM0 1461 aa33.78■■■■□ 3
SH3BP2-204ENST00000452765 IFT140Q96RY7 1462 aa33.78■■■■□ 3
SH3BP2-204ENST00000452765 GOLGA3Q08378 1498 aa33.77■■■■□ 3
SH3BP2-204ENST00000452765 GAPVD1Q14C86 1478 aa33.77■■■■□ 3
SH3BP2-204ENST00000452765 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
SH3BP2-204ENST00000452765 CARMIL1Q5VZK9 1371 aa33.7■■■□□ 2.99
SH3BP2-204ENST00000452765 RANGAP1P46060 587 aaPredicted RBP33.62■■■□□ 2.97
SH3BP2-204ENST00000452765 TNIKQ9UKE5 1360 aa33.62■■■□□ 2.97
SH3BP2-204ENST00000452765 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
SH3BP2-204ENST00000452765 PBRM1Q86U86 1689 aa33.58■■■□□ 2.97
SH3BP2-204ENST00000452765 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
SH3BP2-204ENST00000452765 CEP162Q5TB80 1403 aa33.5■■■□□ 2.95
SH3BP2-204ENST00000452765 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
SH3BP2-204ENST00000452765 CUL7Q14999 1698 aa33.49■■■□□ 2.95
SH3BP2-204ENST00000452765 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
SH3BP2-204ENST00000452765 ADAMTS12P58397 1594 aa33.35■■■□□ 2.93
SH3BP2-204ENST00000452765 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
SH3BP2-204ENST00000452765 CLIP1P30622 1438 aa33.3■■■□□ 2.92
SH3BP2-204ENST00000452765 FBLN2P98095 1184 aa33.28■■■□□ 2.92
SH3BP2-204ENST00000452765 CHMP7Q8WUX9 453 aaPredicted RBP33.2■■■□□ 2.91
SH3BP2-204ENST00000452765 MAGI1Q96QZ7 1491 aaPredicted RBP33.2■■■□□ 2.91
SH3BP2-204ENST00000452765 CTTNBP2Q8WZ74 1663 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms