RNA–Protein interactions for RNA: ENST00000396872.7

SLC29A4-202, Transcript of solute carrier family 29 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC29A4, Length 5,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-202ENST00000396872 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
SLC29A4-202ENST00000396872 SUPT5HO00267 1087 aaKnown RBP30.78■■■□□ 2.52
SLC29A4-202ENST00000396872 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
SLC29A4-202ENST00000396872 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
SLC29A4-202ENST00000396872 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
SLC29A4-202ENST00000396872 PCGF6Q9BYE7 350 aa29.53■■■□□ 2.32
SLC29A4-202ENST00000396872 PELP1Q8IZL8 1130 aaKnown RBP29.36■■■□□ 2.29
SLC29A4-202ENST00000396872 FAM9AQ8IZU1 332 aaPredicted RBP29.04■■■□□ 2.24
SLC29A4-202ENST00000396872 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.22
SLC29A4-202ENST00000396872 CENPBP07199 599 aaPredicted RBP28.77■■■□□ 2.2
SLC29A4-202ENST00000396872 APLP2Q06481 763 aa28.73■■■□□ 2.19
SLC29A4-202ENST00000396872 ZEB1P37275 1124 aaPredicted RBP28.66■■■□□ 2.18
SLC29A4-202ENST00000396872 CCER1Q8TC90 406 aaPredicted RBP28.56■■■□□ 2.16
SLC29A4-202ENST00000396872 YTHDC1Q96MU7 727 aaKnown RBP28.35■■■□□ 2.13
SLC29A4-202ENST00000396872 ERICH6Q7L0X2 663 aa28.33■■■□□ 2.13
SLC29A4-202ENST00000396872 HRCP23327 699 aa28.32■■■□□ 2.12
SLC29A4-202ENST00000396872 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
SLC29A4-202ENST00000396872 MYT1Q01538 1121 aa28.23■■■□□ 2.11
SLC29A4-202ENST00000396872 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
SLC29A4-202ENST00000396872 PPARGC1BQ86YN6 1023 aaKnown RBP28.12■■■□□ 2.09
SLC29A4-202ENST00000396872 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.07
SLC29A4-202ENST00000396872 UBTFP17480 764 aaKnown RBP27.85■■■□□ 2.05
SLC29A4-202ENST00000396872 NEFLP07196 543 aa27.83■■■□□ 2.05
SLC29A4-202ENST00000396872 LOC105371045A0A1W2PR82 267 aa27.78■■■□□ 2.04
SLC29A4-202ENST00000396872 ATP1B4Q9UN42 357 aaPredicted RBP27.66■■■□□ 2.02
SLC29A4-202ENST00000396872 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
SLC29A4-202ENST00000396872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
SLC29A4-202ENST00000396872 DIEXFQ68CQ4 756 aaKnown RBP27.27■■□□□ 1.96
SLC29A4-202ENST00000396872 HNRNPUL2Q1KMD3 747 aaKnown RBP27.25■■□□□ 1.95
SLC29A4-202ENST00000396872 ITGAEP38570 1179 aa27.19■■□□□ 1.94
SLC29A4-202ENST00000396872 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
SLC29A4-202ENST00000396872 POLR3GLQ9BT43 218 aa26.9■■□□□ 1.9
SLC29A4-202ENST00000396872 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
SLC29A4-202ENST00000396872 DAXXQ9UER7 740 aaPredicted RBP26.87■■□□□ 1.89
SLC29A4-202ENST00000396872 BCANQ96GW7 911 aa26.79■■□□□ 1.88
SLC29A4-202ENST00000396872 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
SLC29A4-202ENST00000396872 RTL5Q5HYW3 569 aaPredicted RBP26.63■■□□□ 1.85
SLC29A4-202ENST00000396872 ZNF316A6NFI3 1004 aaPredicted RBP26.49■■□□□ 1.83
SLC29A4-202ENST00000396872 NEUROD1Q13562 356 aa26.4■■□□□ 1.82
SLC29A4-202ENST00000396872 FAM50AQ14320 339 aaKnown RBP26.33■■□□□ 1.81
SLC29A4-202ENST00000396872 CDK11AQ9UQ88 783 aaPredicted RBP26.28■■□□□ 1.8
SLC29A4-202ENST00000396872 CLSPNQ9HAW4 1339 aa26.27■■□□□ 1.8
SLC29A4-202ENST00000396872 ANP32CO43423 234 aa26.23■■□□□ 1.79
SLC29A4-202ENST00000396872 SCAF1Q9H7N4 1312 aaKnown RBP26.2■■□□□ 1.78
SLC29A4-202ENST00000396872 MYT1LQ9UL68 1186 aa26.11■■□□□ 1.77
SLC29A4-202ENST00000396872 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
SLC29A4-202ENST00000396872 SLC4A1APQ9BWU0 796 aaKnown RBP26.01■■□□□ 1.75
SLC29A4-202ENST00000396872 FKBP8Q14318 412 aa25.97■■□□□ 1.75
SLC29A4-202ENST00000396872 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
SLC29A4-202ENST00000396872 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
SLC29A4-202ENST00000396872 ANP32AP39687 249 aaKnown RBP25.81■■□□□ 1.72
SLC29A4-202ENST00000396872 NPM2Q86SE8 214 aaKnown RBP25.8■■□□□ 1.72
SLC29A4-202ENST00000396872 CSRNP3Q8WYN3 585 aa25.75■■□□□ 1.71
SLC29A4-202ENST00000396872 MIER1Q8N108 512 aa25.71■■□□□ 1.71
SLC29A4-202ENST00000396872 EIF5BO60841 1220 aaKnown RBP25.68■■□□□ 1.7
SLC29A4-202ENST00000396872 DDX10Q13206 875 aaKnown RBP25.68■■□□□ 1.7
SLC29A4-202ENST00000396872 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.73e-7■□□□□ 9.8
SLC29A4-202ENST00000396872 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
SLC29A4-202ENST00000396872 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
SLC29A4-202ENST00000396872 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
SLC29A4-202ENST00000396872 NBR1Q14596 966 aa25.57■■□□□ 1.68
SLC29A4-202ENST00000396872 BCL11AQ9H165 835 aa25.54■■□□□ 1.68
SLC29A4-202ENST00000396872 CANXP27824 592 aaKnown RBP25.52■■□□□ 1.68
SLC29A4-202ENST00000396872 FAM9BQ8IZU0 186 aa25.5■■□□□ 1.67
SLC29A4-202ENST00000396872 ABCC9O60706 1549 aa25.46■■□□□ 1.67
SLC29A4-202ENST00000396872 IRX6P78412 446 aaPredicted RBP25.44■■□□□ 1.66
SLC29A4-202ENST00000396872 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
SLC29A4-202ENST00000396872 TONSLQ96HA7 1378 aa25.39■■□□□ 1.66
SLC29A4-202ENST00000396872 ZBTB47Q9UFB7 747 aaPredicted RBP25.37■■□□□ 1.65
SLC29A4-202ENST00000396872 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
SLC29A4-202ENST00000396872 HIRIP3Q9BW71 556 aaPredicted RBP25.33■■□□□ 1.65
SLC29A4-202ENST00000396872 CCDC136Q96JN2 1154 aa25.32■■□□□ 1.64
SLC29A4-202ENST00000396872 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
SLC29A4-202ENST00000396872 ZNF777Q9ULD5 760 aaPredicted RBP25.18■■□□□ 1.62
SLC29A4-202ENST00000396872 ARXQ96QS3 562 aa25.18■■□□□ 1.62
SLC29A4-202ENST00000396872 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
SLC29A4-202ENST00000396872 FBLN2P98095 1184 aa25.1■■□□□ 1.61
SLC29A4-202ENST00000396872 TMC1Q8TDI8 760 aa25.1■■□□□ 1.61
SLC29A4-202ENST00000396872 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
SLC29A4-202ENST00000396872 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
SLC29A4-202ENST00000396872 HSP90AA1P07900 732 aaKnown RBP25.07■■□□□ 1.6
SLC29A4-202ENST00000396872 ANP32BQ92688 251 aaKnown RBP25.06■■□□□ 1.6
SLC29A4-202ENST00000396872 CHIC2Q9UKJ5 165 aa25.06■■□□□ 1.6
SLC29A4-202ENST00000396872 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
SLC29A4-202ENST00000396872 UPF2Q9HAU5 1272 aaKnown RBP25.05■■□□□ 1.6
SLC29A4-202ENST00000396872 GLIPR1L2Q4G1C9 344 aa25.02■■□□□ 1.6
SLC29A4-202ENST00000396872 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
SLC29A4-202ENST00000396872 SUPT16HQ9Y5B9 1047 aaKnown RBP25■■□□□ 1.59
SLC29A4-202ENST00000396872 NEFMP07197 916 aa25■■□□□ 1.59
SLC29A4-202ENST00000396872 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
SLC29A4-202ENST00000396872 CLIP1P30622 1438 aa24.92■■□□□ 1.58
SLC29A4-202ENST00000396872 CEP162Q5TB80 1403 aa24.89■■□□□ 1.57
SLC29A4-202ENST00000396872 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.85■■□□□ 1.57
SLC29A4-202ENST00000396872 RTN4Q9NQC3 1192 aaKnown RBP24.84■■□□□ 1.57
SLC29A4-202ENST00000396872 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.57
SLC29A4-202ENST00000396872 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
SLC29A4-202ENST00000396872 WDR43Q15061 677 aaKnown RBP eCLIP24.77■■□□□ 1.56
SLC29A4-202ENST00000396872 LAS1LQ9Y4W2 734 aaKnown RBP24.73■■□□□ 1.55
SLC29A4-202ENST00000396872 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
SLC29A4-202ENST00000396872 DDRGK1Q96HY6 314 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms