RNA–Protein interactions for RNA: ENST00000397841.5

LINC01547-202, Transcript of long intergenic non-protein coding RNA 1547, humanhuman

TSL 2 BASIC

Gene LINC01547, Length 2,303 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01547-202ENST00000397841 NISCHQ9Y2I1 1504 aa42.64■■■■■ 4.42
LINC01547-202ENST00000397841 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
LINC01547-202ENST00000397841 SHROOM4Q9ULL8 1493 aa36.05■■■■□ 3.36
LINC01547-202ENST00000397841 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
LINC01547-202ENST00000397841 DCAF8L2P0C7V8 631 aa35.33■■■■□ 3.25
LINC01547-202ENST00000397841 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
LINC01547-202ENST00000397841 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.2
LINC01547-202ENST00000397841 CHIC1Q5VXU3 224 aa34.26■■■■□ 3.07
LINC01547-202ENST00000397841 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
LINC01547-202ENST00000397841 SCRIBQ14160 1630 aa33.99■■■■□ 3.03
LINC01547-202ENST00000397841 ABCC9O60706 1549 aa33.95■■■■□ 3.03
LINC01547-202ENST00000397841 NACADO15069 1562 aa33.73■■■□□ 2.99
LINC01547-202ENST00000397841 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
LINC01547-202ENST00000397841 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
LINC01547-202ENST00000397841 CECR2Q9BXF3 1484 aa33.17■■■□□ 2.9
LINC01547-202ENST00000397841 LOC105371045A0A1W2PR82 267 aa33.17■■■□□ 2.9
LINC01547-202ENST00000397841 MROH2BQ7Z745 1585 aa33.08■■■□□ 2.89
LINC01547-202ENST00000397841 TRIM41Q8WV44 630 aa32.99■■■□□ 2.87
LINC01547-202ENST00000397841 PCGF6Q9BYE7 350 aa32.97■■■□□ 2.87
LINC01547-202ENST00000397841 WIZO95785 1651 aa32.91■■■□□ 2.86
LINC01547-202ENST00000397841 HRCP23327 699 aa32.9■■■□□ 2.86
LINC01547-202ENST00000397841 BAZ1AQ9NRL2 1556 aaPredicted RBP32.81■■■□□ 2.84
LINC01547-202ENST00000397841 UNC13AQ9UPW8 1703 aa32.67■■■□□ 2.82
LINC01547-202ENST00000397841 FAM9AQ8IZU1 332 aaPredicted RBP32.6■■■□□ 2.81
LINC01547-202ENST00000397841 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
LINC01547-202ENST00000397841 TRIM26Q12899 539 aaPredicted RBP32.5■■■□□ 2.79
LINC01547-202ENST00000397841 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.79
LINC01547-202ENST00000397841 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
LINC01547-202ENST00000397841 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.76
LINC01547-202ENST00000397841 EHMT2Q96KQ7 1210 aa32.26■■■□□ 2.75
LINC01547-202ENST00000397841 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
LINC01547-202ENST00000397841 BICRAQ9NZM4 1560 aa32.22■■■□□ 2.75
LINC01547-202ENST00000397841 PABPN1Q86U42 306 aaKnown RBP eCLIP32.21■■■□□ 2.75
LINC01547-202ENST00000397841 PPARGC1BQ86YN6 1023 aaKnown RBP32.14■■■□□ 2.74
LINC01547-202ENST00000397841 ABCC8Q09428 1581 aa32.06■■■□□ 2.72
LINC01547-202ENST00000397841 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
LINC01547-202ENST00000397841 ZEB1P37275 1124 aaPredicted RBP31.78■■■□□ 2.68
LINC01547-202ENST00000397841 SOGA1O94964 1423 aa31.72■■■□□ 2.67
LINC01547-202ENST00000397841 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
LINC01547-202ENST00000397841 EEA1Q15075 1411 aa31.7■■■□□ 2.66
LINC01547-202ENST00000397841 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
LINC01547-202ENST00000397841 WRNQ14191 1432 aaPredicted RBP eCLIP31.62■■■□□ 2.65
LINC01547-202ENST00000397841 CSRNP3Q8WYN3 585 aa31.61■■■□□ 2.65
LINC01547-202ENST00000397841 TNIKQ9UKE5 1360 aa31.54■■■□□ 2.64
LINC01547-202ENST00000397841 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
LINC01547-202ENST00000397841 CEP162Q5TB80 1403 aa31.53■■■□□ 2.64
LINC01547-202ENST00000397841 UBTFP17480 764 aaKnown RBP31.46■■■□□ 2.63
LINC01547-202ENST00000397841 SYNJ1O43426 1573 aa31.44■■■□□ 2.62
LINC01547-202ENST00000397841 GOLGA3Q08378 1498 aa31.41■■■□□ 2.62
LINC01547-202ENST00000397841 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.6
LINC01547-202ENST00000397841 KIF21BO75037 1637 aa31.23■■■□□ 2.59
LINC01547-202ENST00000397841 TTBK1Q5TCY1 1321 aaPredicted RBP31.19■■■□□ 2.58
LINC01547-202ENST00000397841 HMGXB3Q12766 1538 aa31.17■■■□□ 2.58
LINC01547-202ENST00000397841 NCAPD3P42695 1498 aa31.17■■■□□ 2.58
LINC01547-202ENST00000397841 TOP2BQ02880 1626 aa31.14■■■□□ 2.58
LINC01547-202ENST00000397841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.14■■■□□ 2.58
LINC01547-202ENST00000397841 CCER1Q8TC90 406 aaPredicted RBP31.13■■■□□ 2.57
LINC01547-202ENST00000397841 BIVM-ERCC5R4GMW8 1640 aa31.04■■■□□ 2.56
LINC01547-202ENST00000397841 CLIP1P30622 1438 aa31.01■■■□□ 2.56
LINC01547-202ENST00000397841 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
LINC01547-202ENST00000397841 VPS8Q8N3P4 1428 aa30.86■■■□□ 2.53
LINC01547-202ENST00000397841 CFTRP13569 1480 aa30.85■■■□□ 2.53
LINC01547-202ENST00000397841 CUX1P39880 1505 aa30.82■■■□□ 2.52
LINC01547-202ENST00000397841 APLP2Q06481 763 aa30.8■■■□□ 2.52
LINC01547-202ENST00000397841 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
LINC01547-202ENST00000397841 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
LINC01547-202ENST00000397841 PRXQ9BXM0 1461 aa30.75■■■□□ 2.51
LINC01547-202ENST00000397841 KIF27Q86VH2 1401 aa30.71■■■□□ 2.51
LINC01547-202ENST00000397841 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
LINC01547-202ENST00000397841 HNRNPUL2Q1KMD3 747 aaKnown RBP30.58■■■□□ 2.49
LINC01547-202ENST00000397841 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
LINC01547-202ENST00000397841 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
LINC01547-202ENST00000397841 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
LINC01547-202ENST00000397841 CUX2O14529 1486 aa30.4■■■□□ 2.46
LINC01547-202ENST00000397841 DIEXFQ68CQ4 756 aaKnown RBP30.39■■■□□ 2.45
LINC01547-202ENST00000397841 IGF1RP08069 1367 aa30.33■■■□□ 2.45
LINC01547-202ENST00000397841 FGD5Q6ZNL6 1462 aa30.32■■■□□ 2.44
LINC01547-202ENST00000397841 ARHGAP35Q9NRY4 1499 aa30.28■■■□□ 2.44
LINC01547-202ENST00000397841 SCAF1Q9H7N4 1312 aaKnown RBP30.28■■■□□ 2.44
LINC01547-202ENST00000397841 KANK4Q5T7N3 995 aaPredicted RBP30.27■■■□□ 2.44
LINC01547-202ENST00000397841 ZNF316A6NFI3 1004 aaPredicted RBP30.24■■■□□ 2.43
LINC01547-202ENST00000397841 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
LINC01547-202ENST00000397841 CARMIL1Q5VZK9 1371 aa30.23■■■□□ 2.43
LINC01547-202ENST00000397841 RRBP1Q9P2E9 1410 aaKnown RBP30.11■■■□□ 2.41
LINC01547-202ENST00000397841 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
LINC01547-202ENST00000397841 CLSPNQ9HAW4 1339 aa30.03■■■□□ 2.4
LINC01547-202ENST00000397841 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
LINC01547-202ENST00000397841 ACIN1Q9UKV3 1341 aaKnown RBP30.02■■■□□ 2.4
LINC01547-202ENST00000397841 NESP48681 1621 aa30.01■■■□□ 2.39
LINC01547-202ENST00000397841 CCNB3Q8WWL7 1395 aa30.01■■■□□ 2.39
LINC01547-202ENST00000397841 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
LINC01547-202ENST00000397841 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
LINC01547-202ENST00000397841 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
LINC01547-202ENST00000397841 MAP3K1Q13233 1512 aa29.98■■■□□ 2.39
LINC01547-202ENST00000397841 DHX57Q6P158 1386 aaKnown RBP29.97■■■□□ 2.39
LINC01547-202ENST00000397841 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
LINC01547-202ENST00000397841 TIAM1Q13009 1591 aa29.96■■■□□ 2.39
LINC01547-202ENST00000397841 CENPBP07199 599 aaPredicted RBP29.94■■■□□ 2.38
LINC01547-202ENST00000397841 FHAD1B1AJZ9 1412 aa29.92■■■□□ 2.38
LINC01547-202ENST00000397841 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms