RNA–Protein interactions for RNA: ENST00000394500.2

NT5C3AP1-201, Transcript of 5'-nucleotidase, cytosolic IIIA pseudogene 1, humanhuman

BASIC

Gene NT5C3AP1, Length 1,012 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3AP1-201ENST00000394500 NISCHQ9Y2I1 1504 aa52.72■■■■■ 6.03
NT5C3AP1-201ENST00000394500 CCDC180Q9P1Z9 1646 aa47■■■■■ 5.11
NT5C3AP1-201ENST00000394500 ABCC9O60706 1549 aa46.21■■■■■ 4.99
NT5C3AP1-201ENST00000394500 RB1CC1Q8TDY2 1594 aa44.31■■■■■ 4.68
NT5C3AP1-201ENST00000394500 DCAF8L2P0C7V8 631 aa44.21■■■■■ 4.67
NT5C3AP1-201ENST00000394500 NACADO15069 1562 aa44.18■■■■■ 4.66
NT5C3AP1-201ENST00000394500 ZCCHC6Q5VYS8 1495 aaKnown RBP43.87■■■■■ 4.61
NT5C3AP1-201ENST00000394500 MYO15BQ96JP2 1530 aa43.78■■■■■ 4.6
NT5C3AP1-201ENST00000394500 DCAF1Q9Y4B6 1507 aa43.57■■■■■ 4.56
NT5C3AP1-201ENST00000394500 UNC13AQ9UPW8 1703 aa43.41■■■■■ 4.54
NT5C3AP1-201ENST00000394500 DNAJC5BQ9UF47 199 aa43.18■■■■■ 4.5
NT5C3AP1-201ENST00000394500 PABPN1Q86U42 306 aaKnown RBP eCLIP43.12■■■■■ 4.49
NT5C3AP1-201ENST00000394500 BICRAQ9NZM4 1560 aa42.95■■■■■ 4.47
NT5C3AP1-201ENST00000394500 SCRIBQ14160 1630 aa42.91■■■■■ 4.46
NT5C3AP1-201ENST00000394500 SHROOM4Q9ULL8 1493 aa42.41■■■■■ 4.38
NT5C3AP1-201ENST00000394500 EIF4G1Q04637 1599 aaKnown RBP41.84■■■■■ 4.29
NT5C3AP1-201ENST00000394500 CC2D2AQ9P2K1 1620 aa41.73■■■■■ 4.27
NT5C3AP1-201ENST00000394500 CECR2Q9BXF3 1484 aa41.62■■■■■ 4.25
NT5C3AP1-201ENST00000394500 SMARCA4P51532 1647 aa40.99■■■■■ 4.15
NT5C3AP1-201ENST00000394500 BAZ1AQ9NRL2 1556 aaPredicted RBP40.89■■■■■ 4.14
NT5C3AP1-201ENST00000394500 ATAD2BQ9ULI0 1458 aa40.75■■■■■ 4.11
NT5C3AP1-201ENST00000394500 SMARCA2P51531 1590 aa40.73■■■■■ 4.11
NT5C3AP1-201ENST00000394500 NCAPD3P42695 1498 aa40.72■■■■■ 4.11
NT5C3AP1-201ENST00000394500 MROH2BQ7Z745 1585 aa40.65■■■■■ 4.1
NT5C3AP1-201ENST00000394500 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
NT5C3AP1-201ENST00000394500 PEG3Q9GZU2 1588 aa40.52■■■■■ 4.08
NT5C3AP1-201ENST00000394500 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
NT5C3AP1-201ENST00000394500 WIZO95785 1651 aa40.27■■■■■ 4.04
NT5C3AP1-201ENST00000394500 RSF1Q96T23 1441 aaPredicted RBP40.09■■■■■ 4.01
NT5C3AP1-201ENST00000394500 ERCC6Q03468 1493 aa39.92■■■■□ 3.98
NT5C3AP1-201ENST00000394500 NESP48681 1621 aa39.88■■■■□ 3.97
NT5C3AP1-201ENST00000394500 TOP2AP11388 1531 aaKnown RBP39.77■■■■□ 3.96
NT5C3AP1-201ENST00000394500 LAMC3Q9Y6N6 1575 aa39.74■■■■□ 3.95
NT5C3AP1-201ENST00000394500 CUX2O14529 1486 aa39.74■■■■□ 3.95
NT5C3AP1-201ENST00000394500 DNAJC5Q9H3Z4 198 aa39.56■■■■□ 3.92
NT5C3AP1-201ENST00000394500 CADPSQ9ULU8 1353 aa39.55■■■■□ 3.92
NT5C3AP1-201ENST00000394500 KIF21AQ7Z4S6 1674 aa39.48■■■■□ 3.91
NT5C3AP1-201ENST00000394500 PDS5BQ9NTI5 1447 aa39.45■■■■□ 3.91
NT5C3AP1-201ENST00000394500 THOC2Q8NI27 1593 aaKnown RBP39.31■■■■□ 3.88
NT5C3AP1-201ENST00000394500 CCDC88BA6NC98 1476 aa39.3■■■■□ 3.88
NT5C3AP1-201ENST00000394500 CFTRP13569 1480 aa39.27■■■■□ 3.88
NT5C3AP1-201ENST00000394500 FANCD2Q9BXW9 1451 aa39.13■■■■□ 3.85
NT5C3AP1-201ENST00000394500 PRDM2Q13029 1718 aa39.13■■■■□ 3.85
NT5C3AP1-201ENST00000394500 CEP164Q9UPV0 1460 aa39.11■■■■□ 3.85
NT5C3AP1-201ENST00000394500 MRC2Q9UBG0 1479 aa39.07■■■■□ 3.85
NT5C3AP1-201ENST00000394500 SUPT5HO00267 1087 aaKnown RBP39.05■■■■□ 3.84
NT5C3AP1-201ENST00000394500 WDR62O43379 1518 aa38.94■■■■□ 3.82
NT5C3AP1-201ENST00000394500 URB2Q14146 1524 aaKnown RBP38.75■■■■□ 3.79
NT5C3AP1-201ENST00000394500 TOPBP1Q92547 1522 aa38.49■■■■□ 3.75
NT5C3AP1-201ENST00000394500 ABCC8Q09428 1581 aa38.45■■■■□ 3.75
NT5C3AP1-201ENST00000394500 DNMBPQ6XZF7 1577 aa38.44■■■■□ 3.74
NT5C3AP1-201ENST00000394500 IFT140Q96RY7 1462 aa38.27■■■■□ 3.72
NT5C3AP1-201ENST00000394500 CUX1P39880 1505 aa38.15■■■■□ 3.7
NT5C3AP1-201ENST00000394500 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
NT5C3AP1-201ENST00000394500 ZNF608Q9ULD9 1512 aaPredicted RBP38.13■■■■□ 3.69
NT5C3AP1-201ENST00000394500 TARBP1Q13395 1621 aaKnown RBP38.1■■■■□ 3.69
NT5C3AP1-201ENST00000394500 OSCARQ8IYS5 282 aa38.07■■■■□ 3.68
NT5C3AP1-201ENST00000394500 FGD5Q6ZNL6 1462 aa38.05■■■■□ 3.68
NT5C3AP1-201ENST00000394500 EIF4G3O43432 1585 aaKnown RBP38.02■■■■□ 3.68
NT5C3AP1-201ENST00000394500 RAD54L2Q9Y4B4 1467 aa38.01■■■■□ 3.67
NT5C3AP1-201ENST00000394500 SOGA1O94964 1423 aa37.99■■■■□ 3.67
NT5C3AP1-201ENST00000394500 TRIM41Q8WV44 630 aa37.94■■■■□ 3.66
NT5C3AP1-201ENST00000394500 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.66
NT5C3AP1-201ENST00000394500 WRNQ14191 1432 aaPredicted RBP eCLIP37.83■■■■□ 3.65
NT5C3AP1-201ENST00000394500 BIVM-ERCC5R4GMW8 1640 aa37.81■■■■□ 3.64
NT5C3AP1-201ENST00000394500 TDRD9Q8NDG6 1382 aaKnown RBP37.8■■■■□ 3.64
NT5C3AP1-201ENST00000394500 SYNJ1O43426 1573 aa37.79■■■■□ 3.64
NT5C3AP1-201ENST00000394500 WDR97A6NE52 1622 aa37.79■■■■□ 3.64
NT5C3AP1-201ENST00000394500 TOP2BQ02880 1626 aa37.79■■■■□ 3.64
NT5C3AP1-201ENST00000394500 ABCA10Q8WWZ4 1543 aa37.64■■■■□ 3.62
NT5C3AP1-201ENST00000394500 CHD1O14646 1710 aa37.64■■■■□ 3.62
NT5C3AP1-201ENST00000394500 PBRM1Q86U86 1689 aa37.59■■■■□ 3.61
NT5C3AP1-201ENST00000394500 GRIN2BQ13224 1484 aa37.56■■■■□ 3.6
NT5C3AP1-201ENST00000394500 GAPVD1Q14C86 1478 aa37.56■■■■□ 3.6
NT5C3AP1-201ENST00000394500 SNAPC4Q5SXM2 1469 aa37.56■■■■□ 3.6
NT5C3AP1-201ENST00000394500 ABCA5Q8WWZ7 1642 aa37.54■■■■□ 3.6
NT5C3AP1-201ENST00000394500 FBLN2P98095 1184 aa37.53■■■■□ 3.6
NT5C3AP1-201ENST00000394500 MAGI1Q96QZ7 1491 aaPredicted RBP37.47■■■■□ 3.59
NT5C3AP1-201ENST00000394500 RIMBP3CA6NJZ7 1639 aa37.39■■■■□ 3.58
NT5C3AP1-201ENST00000394500 RIMBP3BA6NNM3 1639 aa37.39■■■■□ 3.58
NT5C3AP1-201ENST00000394500 RIMBP3Q9UFD9 1639 aa37.39■■■■□ 3.58
NT5C3AP1-201ENST00000394500 CHMP7Q8WUX9 453 aaPredicted RBP37.36■■■■□ 3.57
NT5C3AP1-201ENST00000394500 SYNJ2O15056 1496 aa37.33■■■■□ 3.57
NT5C3AP1-201ENST00000394500 ARHGEF11O15085 1522 aa37.33■■■■□ 3.57
NT5C3AP1-201ENST00000394500 ADAMTS12P58397 1594 aa37.21■■■■□ 3.55
NT5C3AP1-201ENST00000394500 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
NT5C3AP1-201ENST00000394500 CYB5RLQ6IPT4 315 aa37.16■■■■□ 3.54
NT5C3AP1-201ENST00000394500 CLASP1Q7Z460 1538 aa37.11■■■■□ 3.53
NT5C3AP1-201ENST00000394500 FHAD1B1AJZ9 1412 aa37.1■■■■□ 3.53
NT5C3AP1-201ENST00000394500 GRIN2AQ12879 1464 aa37.08■■■■□ 3.53
NT5C3AP1-201ENST00000394500 KIF27Q86VH2 1401 aa37.05■■■■□ 3.52
NT5C3AP1-201ENST00000394500 ARAP1Q96P48 1450 aa36.97■■■■□ 3.51
NT5C3AP1-201ENST00000394500 CEP170Q5SW79 1584 aa36.93■■■■□ 3.5
NT5C3AP1-201ENST00000394500 NUP160Q12769 1436 aa36.89■■■■□ 3.5
NT5C3AP1-201ENST00000394500 IGF1RP08069 1367 aa36.89■■■■□ 3.5
NT5C3AP1-201ENST00000394500 CUL7Q14999 1698 aa36.88■■■■□ 3.49
NT5C3AP1-201ENST00000394500 TRHP20396 242 aaPredicted RBP36.71■■■■□ 3.47
NT5C3AP1-201ENST00000394500 RUSC2Q8N2Y8 1516 aa36.69■■■■□ 3.46
NT5C3AP1-201ENST00000394500 CARMIL1Q5VZK9 1371 aa36.69■■■■□ 3.46
NT5C3AP1-201ENST00000394500 SHROOM2Q13796 1616 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms