Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PRCP-214ENST00000532809 525 ntTSL 36.85□□□□□ -1.314e-7■■■□□ 17
SND1Q7KZF4 ATF5-203ENST00000596658 722 ntTSL 219■□□□□ 0.636e-15■■■□□ 17
SND1Q7KZF4 TMEM208-212ENST00000567193 915 ntTSL 215.84■□□□□ 0.133e-7■■■□□ 17
SND1Q7KZF4 TMEM208-204ENST00000563168 1525 ntTSL 215.34■□□□□ 0.053e-7■■■□□ 17
SND1Q7KZF4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.16■□□□□ 0.023e-7■■■□□ 17
SND1Q7KZF4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.113e-7■■■□□ 17
SND1Q7KZF4 TMEM208-203ENST00000562235 775 ntTSL 213.84□□□□□ -0.193e-7■■■□□ 17
SND1Q7KZF4 TMEM208-205ENST00000563271 614 ntTSL 213.21□□□□□ -0.293e-7■■■□□ 17
SND1Q7KZF4 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC12.42□□□□□ -0.423e-7■■■□□ 17
SND1Q7KZF4 TMEM208-206ENST00000563426 457 ntTSL 310.85□□□□□ -0.673e-7■■■□□ 17
SND1Q7KZF4 OS9-211ENST00000549897 700 ntTSL 215.32■□□□□ 0.048e-11■■■□□ 17
SND1Q7KZF4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.96■□□□□ 0.797e-11■■■□□ 17
SND1Q7KZF4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.17e-11■■■□□ 17
SND1Q7KZF4 SDC2-207ENST00000522911 677 ntTSL 3 BASIC9.72□□□□□ -0.857e-11■■■□□ 17
SND1Q7KZF4 SDC2-208ENST00000523877 621 ntTSL 58.01□□□□□ -1.137e-11■■■□□ 17
SND1Q7KZF4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.46□□□□□ -1.547e-11■■■□□ 17
SND1Q7KZF4 SDC2-206ENST00000521590 507 ntTSL 45.2□□□□□ -1.587e-11■■■□□ 17
SND1Q7KZF4 PROC-207ENST00000431364 566 ntTSL 412.64□□□□□ -0.391e-14■■■□□ 17
SND1Q7KZF4 NCSTN-208ENST00000438008 702 ntTSL 518.42■□□□□ 0.542e-8■■■□□ 17
SND1Q7KZF4 NCSTN-211ENST00000467837 726 ntTSL 516.81■□□□□ 0.282e-8■■■□□ 17
SND1Q7KZF4 C3-207ENST00000596238 563 ntTSL 28□□□□□ -1.131e-323■■■□□ 17
SND1Q7KZF4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.522e-15■■■□□ 17
SND1Q7KZF4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.452e-15■■■□□ 17
SND1Q7KZF4 CD63-209ENST00000550050 829 ntTSL 516■□□□□ 0.152e-15■■■□□ 17
SND1Q7KZF4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.062e-15■■■□□ 17
SND1Q7KZF4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.052e-15■■■□□ 17
SND1Q7KZF4 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC12.2□□□□□ -0.462e-15■■■□□ 17
SND1Q7KZF4 VMP1-210ENST00000589823 580 ntTSL 314.2□□□□□ -0.147e-7■■■□□ 17
SND1Q7KZF4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.93■□□□□ 0.36e-15■■■□□ 17
SND1Q7KZF4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.256e-15■■■□□ 17
SND1Q7KZF4 DAD1-204ENST00000538631 441 ntTSL 2 BASIC10.09□□□□□ -0.796e-15■■■□□ 17
SND1Q7KZF4 DAD1-203ENST00000535847 591 ntTSL 29.33□□□□□ -0.926e-15■■■□□ 17
SND1Q7KZF4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.623e-8■■■□□ 17
SND1Q7KZF4 RNASET2-204ENST00000421787 1924 ntTSL 221.84■■□□□ 1.093e-8■■■□□ 17
SND1Q7KZF4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.21■□□□□ 0.993e-8■■■□□ 17
SND1Q7KZF4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.47■□□□□ 0.873e-8■■■□□ 17
SND1Q7KZF4 RNASET2-201ENST00000028008 1220 ntTSL 519.11■□□□□ 0.653e-8■■■□□ 17
SND1Q7KZF4 RNASET2-207ENST00000478180 963 ntTSL 518.6■□□□□ 0.573e-8■■■□□ 17
SND1Q7KZF4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.43e-8■■■□□ 17
SND1Q7KZF4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.753e-8■■■□□ 17
SND1Q7KZF4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.373e-7■■■□□ 16.9
SND1Q7KZF4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.22□□□□□ -1.413e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.51■□□□□ 0.392e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.36■□□□□ 0.212e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)14.93□□□□□ -0.022e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC14.42□□□□□ -0.12e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.132e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.192e-7■■■□□ 16.9
SND1Q7KZF4 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.362e-7■■■□□ 16.9
SND1Q7KZF4 YIPF3-212ENST00000503972 933 ntTSL 516.1■□□□□ 0.176e-12■■■□□ 16.9
SND1Q7KZF4 YIPF3-217ENST00000514627 854 ntTSL 312.92□□□□□ -0.346e-12■■■□□ 16.9
SND1Q7KZF4 RETSAT-202ENST00000409984 765 ntTSL 213.17□□□□□ -0.33e-9■■■□□ 16.9
SND1Q7KZF4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.45■■□□□ 1.678e-8■■■□□ 16.9
SND1Q7KZF4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.478e-8■■■□□ 16.9
SND1Q7KZF4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.48■□□□□ 0.558e-8■■■□□ 16.9
SND1Q7KZF4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.58e-8■■■□□ 16.9
SND1Q7KZF4 ITM2C-206ENST00000457215 763 ntTSL 416.83■□□□□ 0.281e-7■■■□□ 16.9
SND1Q7KZF4 ITM2C-205ENST00000418408 563 ntTSL 416.26■□□□□ 0.191e-7■■■□□ 16.9
SND1Q7KZF4 ITM2C-207ENST00000492029 549 ntTSL 515.45■□□□□ 0.061e-7■■■□□ 16.9
SND1Q7KZF4 ITM2C-208ENST00000541852 572 ntTSL 315.45■□□□□ 0.061e-7■■■□□ 16.9
SND1Q7KZF4 ITM2C-209ENST00000543957 573 ntTSL 512.64□□□□□ -0.391e-7■■■□□ 16.9
SND1Q7KZF4 CCT2-213ENST00000551899 572 ntTSL 413.32□□□□□ -0.286e-12■■■□□ 16.9
SND1Q7KZF4 CCT2-207ENST00000549933 536 ntTSL 210.7□□□□□ -0.76e-12■■■□□ 16.9
SND1Q7KZF4 HMGCR-204ENST00000504466 1107 ntTSL 27.84□□□□□ -1.154e-7■■■□□ 16.9
SND1Q7KZF4 SLC13A5-205ENST00000572094 986 ntTSL 515.64■□□□□ 0.097e-9■■■□□ 16.9
SND1Q7KZF4 CDH2-205ENST00000430882 610 ntTSL 46.48□□□□□ -1.374e-8■■■□□ 16.9
SND1Q7KZF4 ATP6V0B-202ENST00000461670 530 ntTSL 518.03■□□□□ 0.481e-9■■■□□ 16.9
SND1Q7KZF4 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.568e-13■■■□□ 16.9
SND1Q7KZF4 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.628e-13■■■□□ 16.9
SND1Q7KZF4 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.798e-13■■■□□ 16.9
SND1Q7KZF4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC9.54□□□□□ -0.888e-13■■■□□ 16.9
SND1Q7KZF4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.888e-13■■■□□ 16.9
SND1Q7KZF4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.88■□□□□ 0.135e-7■■■□□ 16.9
SND1Q7KZF4 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.285e-7■■■□□ 16.9
SND1Q7KZF4 TNFRSF10A-203ENST00000524158 693 ntTSL 516.9■□□□□ 0.34e-6■■■□□ 16.9
SND1Q7KZF4 PRDX1-204ENST00000424390 795 ntTSL 214.42□□□□□ -0.15e-13■■■□□ 16.9
SND1Q7KZF4 PRDX1-205ENST00000447184 606 ntTSL 58.47□□□□□ -1.055e-13■■■□□ 16.9
SND1Q7KZF4 HSPG2-211ENST00000486901 3586 ntTSL 213.93□□□□□ -0.188e-9■■■□□ 16.9
SND1Q7KZF4 CREG1-202ENST00000466652 794 ntTSL 38.94□□□□□ -0.982e-12■■■□□ 16.9
SND1Q7KZF4 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.365e-7■■■□□ 16.9
SND1Q7KZF4 UROD-214ENST00000478467 857 ntTSL 313.46□□□□□ -0.252e-6■■■□□ 16.9
SND1Q7KZF4 UROD-207ENST00000462688 901 ntTSL 512.86□□□□□ -0.352e-6■■■□□ 16.9
SND1Q7KZF4 UROD-215ENST00000486699 968 ntTSL 311.99□□□□□ -0.492e-6■■■□□ 16.9
SND1Q7KZF4 UROD-211ENST00000469548 1044 ntTSL 211.9□□□□□ -0.52e-6■■■□□ 16.9
SND1Q7KZF4 UROD-217ENST00000491300 884 ntTSL 511.48□□□□□ -0.572e-6■■■□□ 16.9
SND1Q7KZF4 UROD-202ENST00000428106 682 ntTSL 310.43□□□□□ -0.742e-6■■■□□ 16.9
SND1Q7KZF4 SEMA3B-201ENST00000416295 1088 ntTSL 518.69■□□□□ 0.582e-10■■■□□ 16.9
SND1Q7KZF4 COLGALT1-205ENST00000600474 552 ntTSL 49□□□□□ -0.976e-8■■■□□ 16.9
SND1Q7KZF4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.422e-7■■■□□ 16.8
SND1Q7KZF4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.642e-7■■■□□ 16.8
SND1Q7KZF4 PTPRC-203ENST00000367367 2291 ntTSL 24.18□□□□□ -1.742e-7■■■□□ 16.8
SND1Q7KZF4 PTPRC-213ENST00000529828 2336 ntTSL 1 (best)3.65□□□□□ -1.822e-7■■■□□ 16.8
SND1Q7KZF4 TFRC-212ENST00000477148 570 ntTSL 410.3□□□□□ -0.766e-12■■■□□ 16.8
SND1Q7KZF4 SYVN1-212ENST00000530451 656 ntTSL 519.79■□□□□ 0.766e-9■■■□□ 16.8
SND1Q7KZF4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.78e-8■■■□□ 16.8
SND1Q7KZF4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.99■□□□□ 0.638e-8■■■□□ 16.8
SND1Q7KZF4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.448e-8■■■□□ 16.8
SND1Q7KZF4 ERO1A-207ENST00000556223 567 ntTSL 416.75■□□□□ 0.278e-8■■■□□ 16.8
SND1Q7KZF4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.088e-8■■■□□ 16.8
SND1Q7KZF4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.9□□□□□ -0.028e-8■■■□□ 16.8
Retrieved 100 of 13,567 protein–RNA pairs in 141.5 ms