RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
SDC2-208ENST00000523877 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
SDC2-208ENST00000523877 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
SDC2-208ENST00000523877 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
SDC2-208ENST00000523877 FOXD1Q16676 465 aa14.73□□□□□ -0.05
SDC2-208ENST00000523877 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
SDC2-208ENST00000523877 MSH5O43196 834 aa13.77□□□□□ -0.21
SDC2-208ENST00000523877 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
SDC2-208ENST00000523877 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
SDC2-208ENST00000523877 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
SDC2-208ENST00000523877 ADRA2BP18089 450 aa13.58□□□□□ -0.24
SDC2-208ENST00000523877 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
SDC2-208ENST00000523877 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
SDC2-208ENST00000523877 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
SDC2-208ENST00000523877 MYT1Q01538 1121 aa12.38□□□□□ -0.43
SDC2-208ENST00000523877 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
SDC2-208ENST00000523877 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
SDC2-208ENST00000523877 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
SDC2-208ENST00000523877 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
SDC2-208ENST00000523877 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
SDC2-208ENST00000523877 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
SDC2-208ENST00000523877 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
SDC2-208ENST00000523877 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
SDC2-208ENST00000523877 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
SDC2-208ENST00000523877 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
SDC2-208ENST00000523877 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
SDC2-208ENST00000523877 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.53
SDC2-208ENST00000523877 APLP2Q06481 763 aa11.58□□□□□ -0.56
SDC2-208ENST00000523877 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
SDC2-208ENST00000523877 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
SDC2-208ENST00000523877 PRKCSHP14314 528 aaPredicted RBP11.46□□□□□ -0.57
SDC2-208ENST00000523877 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
SDC2-208ENST00000523877 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
SDC2-208ENST00000523877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■□□□ 11.4
SDC2-208ENST00000523877 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
SDC2-208ENST00000523877 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
SDC2-208ENST00000523877 KCNA4P22459 653 aa11.11□□□□□ -0.63
SDC2-208ENST00000523877 ARXQ96QS3 562 aa11.07□□□□□ -0.64
SDC2-208ENST00000523877 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
SDC2-208ENST00000523877 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
SDC2-208ENST00000523877 RANGAP1P46060 587 aaPredicted RBP10.99□□□□□ -0.65
SDC2-208ENST00000523877 DSG3P32926 999 aa10.98□□□□□ -0.65
SDC2-208ENST00000523877 CAPN15O75808 1086 aa10.96□□□□□ -0.65
SDC2-208ENST00000523877 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
SDC2-208ENST00000523877 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
SDC2-208ENST00000523877 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
SDC2-208ENST00000523877 POTEHQ6S545 545 aa10.8□□□□□ -0.68
SDC2-208ENST00000523877 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
SDC2-208ENST00000523877 ABCB7O75027 752 aa10.73□□□□□ -0.69
SDC2-208ENST00000523877 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
SDC2-208ENST00000523877 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
SDC2-208ENST00000523877 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
SDC2-208ENST00000523877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
SDC2-208ENST00000523877 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
SDC2-208ENST00000523877 BCL11AQ9H165 835 aa10.61□□□□□ -0.71
SDC2-208ENST00000523877 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
SDC2-208ENST00000523877 SLC4A1APQ9BWU0 796 aaKnown RBP10.54□□□□□ -0.72
SDC2-208ENST00000523877 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
SDC2-208ENST00000523877 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
SDC2-208ENST00000523877 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
SDC2-208ENST00000523877 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
SDC2-208ENST00000523877 POLA2Q14181 598 aa10.42□□□□□ -0.74
SDC2-208ENST00000523877 PODXL2Q9NZ53 605 aa10.4□□□□□ -0.74
SDC2-208ENST00000523877 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
SDC2-208ENST00000523877 BCANQ96GW7 911 aa10.37□□□□□ -0.75
SDC2-208ENST00000523877 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
SDC2-208ENST00000523877 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
SDC2-208ENST00000523877 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
SDC2-208ENST00000523877 FAM9AQ8IZU1 332 aaPredicted RBP10.29□□□□□ -0.76
SDC2-208ENST00000523877 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
SDC2-208ENST00000523877 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
SDC2-208ENST00000523877 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.77
SDC2-208ENST00000523877 TPRNQ4KMQ1 711 aa10.24□□□□□ -0.77
SDC2-208ENST00000523877 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
SDC2-208ENST00000523877 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
SDC2-208ENST00000523877 ZBTB22O15209 634 aa10.21□□□□□ -0.77
SDC2-208ENST00000523877 UBE2Q2Q8WVN8 375 aa10.16□□□□□ -0.78
SDC2-208ENST00000523877 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
SDC2-208ENST00000523877 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
SDC2-208ENST00000523877 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
SDC2-208ENST00000523877 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
SDC2-208ENST00000523877 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
SDC2-208ENST00000523877 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
SDC2-208ENST00000523877 REM2Q8IYK8 340 aaPredicted RBP10.09□□□□□ -0.79
SDC2-208ENST00000523877 CENPBP07199 599 aaPredicted RBP10.07□□□□□ -0.8
SDC2-208ENST00000523877 NEFLP07196 543 aa10.06□□□□□ -0.8
SDC2-208ENST00000523877 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
SDC2-208ENST00000523877 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
SDC2-208ENST00000523877 PITPNM1O00562 1244 aa10□□□□□ -0.81
SDC2-208ENST00000523877 PLCB2Q00722 1185 aa9.98□□□□□ -0.81
SDC2-208ENST00000523877 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
SDC2-208ENST00000523877 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
SDC2-208ENST00000523877 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.829e-14■□□□□ 8.9
SDC2-208ENST00000523877 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
SDC2-208ENST00000523877 PDE4CQ08493 712 aa9.93□□□□□ -0.82
SDC2-208ENST00000523877 PKNOX2Q96KN3 472 aa9.93□□□□□ -0.82
SDC2-208ENST00000523877 CDK11AQ9UQ88 783 aaPredicted RBP9.93□□□□□ -0.82
SDC2-208ENST00000523877 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
SDC2-208ENST00000523877 HAX1O00165 279 aa9.87□□□□□ -0.83
SDC2-208ENST00000523877 HRCP23327 699 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms