RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 NISCHQ9Y2I1 1504 aa50.55■■■■■ 5.68
ITM2C-203ENST00000335005 CCDC180Q9P1Z9 1646 aa43.58■■■■■ 4.57
ITM2C-203ENST00000335005 ZCCHC6Q5VYS8 1495 aaKnown RBP42.72■■■■■ 4.43
ITM2C-203ENST00000335005 SHROOM4Q9ULL8 1493 aa41.97■■■■■ 4.31
ITM2C-203ENST00000335005 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.29
ITM2C-203ENST00000335005 DCAF8L2P0C7V8 631 aa41.19■■■■■ 4.18
ITM2C-203ENST00000335005 SUPT5HO00267 1087 aaKnown RBP40.91■■■■■ 4.14
ITM2C-203ENST00000335005 MYO15BQ96JP2 1530 aa40.88■■■■■ 4.13
ITM2C-203ENST00000335005 NACADO15069 1562 aa40.27■■■■■ 4.04
ITM2C-203ENST00000335005 ABCC9O60706 1549 aa40.24■■■■■ 4.03
ITM2C-203ENST00000335005 SCRIBQ14160 1630 aa40.21■■■■■ 4.03
ITM2C-203ENST00000335005 CHIC1Q5VXU3 224 aa39.83■■■■□ 3.97
ITM2C-203ENST00000335005 RSF1Q96T23 1441 aaPredicted RBP39.65■■■■□ 3.94
ITM2C-203ENST00000335005 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.94
ITM2C-203ENST00000335005 CECR2Q9BXF3 1484 aa39.19■■■■□ 3.86
ITM2C-203ENST00000335005 MROH2BQ7Z745 1585 aa39.11■■■■□ 3.85
ITM2C-203ENST00000335005 UNC13AQ9UPW8 1703 aa39.05■■■■□ 3.84
ITM2C-203ENST00000335005 BAZ1AQ9NRL2 1556 aaPredicted RBP38.92■■■■□ 3.82
ITM2C-203ENST00000335005 WIZO95785 1651 aa38.89■■■■□ 3.82
ITM2C-203ENST00000335005 SMARCA4P51532 1647 aa38.64■■■■□ 3.78
ITM2C-203ENST00000335005 BICRAQ9NZM4 1560 aa38.52■■■■□ 3.76
ITM2C-203ENST00000335005 TOP2AP11388 1531 aaKnown RBP38.48■■■■□ 3.75
ITM2C-203ENST00000335005 EIF4G1Q04637 1599 aaKnown RBP38.42■■■■□ 3.74
ITM2C-203ENST00000335005 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
ITM2C-203ENST00000335005 LOC105371045A0A1W2PR82 267 aa38.32■■■■□ 3.73
ITM2C-203ENST00000335005 SMARCA2P51531 1590 aa38.18■■■■□ 3.7
ITM2C-203ENST00000335005 PEG3Q9GZU2 1588 aa38.14■■■■□ 3.7
ITM2C-203ENST00000335005 CCDC88BA6NC98 1476 aa38.08■■■■□ 3.69
ITM2C-203ENST00000335005 PABPN1Q86U42 306 aaKnown RBP eCLIP38.01■■■■□ 3.67
ITM2C-203ENST00000335005 PCGF6Q9BYE7 350 aa37.77■■■■□ 3.64
ITM2C-203ENST00000335005 FAM9AQ8IZU1 332 aaPredicted RBP37.7■■■■□ 3.63
ITM2C-203ENST00000335005 HRCP23327 699 aa37.69■■■■□ 3.62
ITM2C-203ENST00000335005 ABCC8Q09428 1581 aa37.68■■■■□ 3.62
ITM2C-203ENST00000335005 ATAD2BQ9ULI0 1458 aa37.68■■■■□ 3.62
ITM2C-203ENST00000335005 BAZ1BQ9UIG0 1483 aaKnown RBP37.51■■■■□ 3.59
ITM2C-203ENST00000335005 TRIM26Q12899 539 aaPredicted RBP37.5■■■■□ 3.59
ITM2C-203ENST00000335005 EEA1Q15075 1411 aa37.33■■■■□ 3.57
ITM2C-203ENST00000335005 WRNQ14191 1432 aaPredicted RBP eCLIP37.25■■■■□ 3.55
ITM2C-203ENST00000335005 HMGXB3Q12766 1538 aa37.24■■■■□ 3.55
ITM2C-203ENST00000335005 SOGA1O94964 1423 aa37.18■■■■□ 3.54
ITM2C-203ENST00000335005 NCAPD3P42695 1498 aa37.15■■■■□ 3.54
ITM2C-203ENST00000335005 SYNJ1O43426 1573 aa37.13■■■■□ 3.53
ITM2C-203ENST00000335005 EHMT2Q96KQ7 1210 aa37.1■■■■□ 3.53
ITM2C-203ENST00000335005 RUSC2Q8N2Y8 1516 aa37■■■■□ 3.51
ITM2C-203ENST00000335005 TNIKQ9UKE5 1360 aa36.98■■■■□ 3.51
ITM2C-203ENST00000335005 CSRNP3Q8WYN3 585 aa36.96■■■■□ 3.51
ITM2C-203ENST00000335005 TOP2BQ02880 1626 aa36.88■■■■□ 3.49
ITM2C-203ENST00000335005 GOLGA3Q08378 1498 aa36.88■■■■□ 3.49
ITM2C-203ENST00000335005 CEP162Q5TB80 1403 aa36.88■■■■□ 3.49
ITM2C-203ENST00000335005 KIF21BO75037 1637 aa36.86■■■■□ 3.49
ITM2C-203ENST00000335005 BIVM-ERCC5R4GMW8 1640 aa36.85■■■■□ 3.49
ITM2C-203ENST00000335005 CEP164Q9UPV0 1460 aa36.75■■■■□ 3.47
ITM2C-203ENST00000335005 PRDM2Q13029 1718 aa36.67■■■■□ 3.46
ITM2C-203ENST00000335005 CFTRP13569 1480 aa36.66■■■■□ 3.46
ITM2C-203ENST00000335005 PPARGC1BQ86YN6 1023 aaKnown RBP36.6■■■■□ 3.45
ITM2C-203ENST00000335005 ZEB1P37275 1124 aaPredicted RBP36.58■■■■□ 3.45
ITM2C-203ENST00000335005 UBTFP17480 764 aaKnown RBP36.55■■■■□ 3.44
ITM2C-203ENST00000335005 CUX1P39880 1505 aa36.51■■■■□ 3.43
ITM2C-203ENST00000335005 RAPGEF2Q9Y4G8 1499 aa36.38■■■■□ 3.42
ITM2C-203ENST00000335005 ERICH3Q5RHP9 1530 aa36.38■■■■□ 3.41
ITM2C-203ENST00000335005 CC2D2AQ9P2K1 1620 aa36.37■■■■□ 3.41
ITM2C-203ENST00000335005 CLIP1P30622 1438 aa36.3■■■■□ 3.4
ITM2C-203ENST00000335005 PRXQ9BXM0 1461 aa36.3■■■■□ 3.4
ITM2C-203ENST00000335005 CADPSQ9ULU8 1353 aa36.25■■■■□ 3.39
ITM2C-203ENST00000335005 KIF27Q86VH2 1401 aa36.19■■■■□ 3.38
ITM2C-203ENST00000335005 VPS8Q8N3P4 1428 aa36.18■■■■□ 3.38
ITM2C-203ENST00000335005 FGD5Q6ZNL6 1462 aa35.89■■■■□ 3.34
ITM2C-203ENST00000335005 FANCD2Q9BXW9 1451 aa35.88■■■■□ 3.33
ITM2C-203ENST00000335005 ARAP1Q96P48 1450 aa35.87■■■■□ 3.33
ITM2C-203ENST00000335005 TTBK1Q5TCY1 1321 aaPredicted RBP35.85■■■■□ 3.33
ITM2C-203ENST00000335005 CUX2O14529 1486 aa35.85■■■■□ 3.33
ITM2C-203ENST00000335005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.82■■■■□ 3.32
ITM2C-203ENST00000335005 DNMBPQ6XZF7 1577 aa35.81■■■■□ 3.32
ITM2C-203ENST00000335005 CCER1Q8TC90 406 aaPredicted RBP35.77■■■■□ 3.32
ITM2C-203ENST00000335005 IGF1RP08069 1367 aa35.76■■■■□ 3.32
ITM2C-203ENST00000335005 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
ITM2C-203ENST00000335005 APLP2Q06481 763 aa35.69■■■■□ 3.3
ITM2C-203ENST00000335005 TOPBP1Q92547 1522 aa35.65■■■■□ 3.3
ITM2C-203ENST00000335005 ARHGAP35Q9NRY4 1499 aa35.64■■■■□ 3.3
ITM2C-203ENST00000335005 NESP48681 1621 aa35.61■■■■□ 3.29
ITM2C-203ENST00000335005 ABCA10Q8WWZ4 1543 aa35.61■■■■□ 3.29
ITM2C-203ENST00000335005 CARMIL1Q5VZK9 1371 aa35.59■■■■□ 3.29
ITM2C-203ENST00000335005 RANGAP1P46060 587 aaPredicted RBP35.58■■■■□ 3.29
ITM2C-203ENST00000335005 POLA1P09884 1462 aaPredicted RBP35.56■■■■□ 3.28
ITM2C-203ENST00000335005 WDR97A6NE52 1622 aa35.49■■■■□ 3.27
ITM2C-203ENST00000335005 CUL7Q14999 1698 aa35.46■■■■□ 3.27
ITM2C-203ENST00000335005 RAD54L2Q9Y4B4 1467 aa35.44■■■■□ 3.26
ITM2C-203ENST00000335005 URB2Q14146 1524 aaKnown RBP35.41■■■■□ 3.26
ITM2C-203ENST00000335005 MAP3K1Q13233 1512 aa35.39■■■■□ 3.26
ITM2C-203ENST00000335005 PDS5BQ9NTI5 1447 aa35.34■■■■□ 3.25
ITM2C-203ENST00000335005 RRBP1Q9P2E9 1410 aaKnown RBP35.32■■■■□ 3.24
ITM2C-203ENST00000335005 HNRNPUL2Q1KMD3 747 aaKnown RBP35.31■■■■□ 3.24
ITM2C-203ENST00000335005 KANK4Q5T7N3 995 aaPredicted RBP35.3■■■■□ 3.24
ITM2C-203ENST00000335005 ABCA5Q8WWZ7 1642 aa35.28■■■■□ 3.24
ITM2C-203ENST00000335005 CTTNBP2Q8WZ74 1663 aa35.26■■■■□ 3.24
ITM2C-203ENST00000335005 KIF21AQ7Z4S6 1674 aa35.25■■■■□ 3.23
ITM2C-203ENST00000335005 TIAM1Q13009 1591 aa35.25■■■■□ 3.23
ITM2C-203ENST00000335005 EFCAB5A4FU69 1503 aa35.23■■■■□ 3.23
ITM2C-203ENST00000335005 FHAD1B1AJZ9 1412 aa35.19■■■■□ 3.22
ITM2C-203ENST00000335005 CFAP43Q8NDM7 1665 aa35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms