RNA–Protein interactions for RNA: ENST00000551899.5

CCT2-213, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 4

Gene CCT2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-213ENST00000551899 NISCHQ9Y2I1 1504 aa32.02■■■□□ 2.72
CCT2-213ENST00000551899 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
CCT2-213ENST00000551899 ABCC9O60706 1549 aa28.41■■■□□ 2.14
CCT2-213ENST00000551899 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
CCT2-213ENST00000551899 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
CCT2-213ENST00000551899 NACADO15069 1562 aa27.12■■□□□ 1.93
CCT2-213ENST00000551899 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
CCT2-213ENST00000551899 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
CCT2-213ENST00000551899 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
CCT2-213ENST00000551899 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
CCT2-213ENST00000551899 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
CCT2-213ENST00000551899 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
CCT2-213ENST00000551899 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
CCT2-213ENST00000551899 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
CCT2-213ENST00000551899 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
CCT2-213ENST00000551899 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
CCT2-213ENST00000551899 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
CCT2-213ENST00000551899 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
CCT2-213ENST00000551899 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
CCT2-213ENST00000551899 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
CCT2-213ENST00000551899 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
CCT2-213ENST00000551899 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
CCT2-213ENST00000551899 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
CCT2-213ENST00000551899 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
CCT2-213ENST00000551899 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
CCT2-213ENST00000551899 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
CCT2-213ENST00000551899 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
CCT2-213ENST00000551899 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
CCT2-213ENST00000551899 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
CCT2-213ENST00000551899 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
CCT2-213ENST00000551899 CUX2O14529 1486 aa24.52■■□□□ 1.52
CCT2-213ENST00000551899 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
CCT2-213ENST00000551899 NESP48681 1621 aa24.43■■□□□ 1.5
CCT2-213ENST00000551899 WIZO95785 1651 aa24.35■■□□□ 1.49
CCT2-213ENST00000551899 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
CCT2-213ENST00000551899 THOC2Q8NI27 1593 aaKnown RBP24.23■■□□□ 1.47
CCT2-213ENST00000551899 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
CCT2-213ENST00000551899 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
CCT2-213ENST00000551899 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
CCT2-213ENST00000551899 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
CCT2-213ENST00000551899 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
CCT2-213ENST00000551899 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
CCT2-213ENST00000551899 CFTRP13569 1480 aa23.99■■□□□ 1.43
CCT2-213ENST00000551899 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
CCT2-213ENST00000551899 WDR62O43379 1518 aa23.97■■□□□ 1.43
CCT2-213ENST00000551899 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
CCT2-213ENST00000551899 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
CCT2-213ENST00000551899 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
CCT2-213ENST00000551899 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
CCT2-213ENST00000551899 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
CCT2-213ENST00000551899 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
CCT2-213ENST00000551899 TOPBP1Q92547 1522 aa23.51■■□□□ 1.35
CCT2-213ENST00000551899 IFT140Q96RY7 1462 aa23.5■■□□□ 1.35
CCT2-213ENST00000551899 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
CCT2-213ENST00000551899 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
CCT2-213ENST00000551899 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
CCT2-213ENST00000551899 EIF4G3O43432 1585 aaKnown RBP23.3■■□□□ 1.32
CCT2-213ENST00000551899 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
CCT2-213ENST00000551899 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
CCT2-213ENST00000551899 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
CCT2-213ENST00000551899 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
CCT2-213ENST00000551899 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
CCT2-213ENST00000551899 SOGA1O94964 1423 aa23.17■■□□□ 1.3
CCT2-213ENST00000551899 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
CCT2-213ENST00000551899 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.32e-8■■■■■ 33.4
CCT2-213ENST00000551899 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
CCT2-213ENST00000551899 CUX1P39880 1505 aa23.14■■□□□ 1.3
CCT2-213ENST00000551899 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
CCT2-213ENST00000551899 CHD1O14646 1710 aa23.09■■□□□ 1.29
CCT2-213ENST00000551899 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
CCT2-213ENST00000551899 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
CCT2-213ENST00000551899 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
CCT2-213ENST00000551899 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
CCT2-213ENST00000551899 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
CCT2-213ENST00000551899 ARHGEF11O15085 1522 aa22.99■■□□□ 1.27
CCT2-213ENST00000551899 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
CCT2-213ENST00000551899 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
CCT2-213ENST00000551899 FBLN2P98095 1184 aa22.98■■□□□ 1.27
CCT2-213ENST00000551899 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
CCT2-213ENST00000551899 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
CCT2-213ENST00000551899 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
CCT2-213ENST00000551899 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
CCT2-213ENST00000551899 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
CCT2-213ENST00000551899 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.25
CCT2-213ENST00000551899 SYNJ1O43426 1573 aa22.89■■□□□ 1.25
CCT2-213ENST00000551899 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
CCT2-213ENST00000551899 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
CCT2-213ENST00000551899 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
CCT2-213ENST00000551899 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
CCT2-213ENST00000551899 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
CCT2-213ENST00000551899 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
CCT2-213ENST00000551899 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
CCT2-213ENST00000551899 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
CCT2-213ENST00000551899 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
CCT2-213ENST00000551899 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
CCT2-213ENST00000551899 NUP160Q12769 1436 aa22.59■■□□□ 1.21
CCT2-213ENST00000551899 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
CCT2-213ENST00000551899 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
CCT2-213ENST00000551899 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
CCT2-213ENST00000551899 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms