RNA–Protein interactions for RNA: ENST00000503972.5

YIPF3-212, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-212ENST00000503972 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
YIPF3-212ENST00000503972 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
YIPF3-212ENST00000503972 ABCC9O60706 1549 aa30.61■■■□□ 2.49
YIPF3-212ENST00000503972 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
YIPF3-212ENST00000503972 DCAF8L2P0C7V8 631 aa30.06■■■□□ 2.4
YIPF3-212ENST00000503972 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
YIPF3-212ENST00000503972 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
YIPF3-212ENST00000503972 NACADO15069 1562 aa29.86■■■□□ 2.37
YIPF3-212ENST00000503972 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
YIPF3-212ENST00000503972 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
YIPF3-212ENST00000503972 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
YIPF3-212ENST00000503972 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
YIPF3-212ENST00000503972 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
YIPF3-212ENST00000503972 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
YIPF3-212ENST00000503972 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
YIPF3-212ENST00000503972 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
YIPF3-212ENST00000503972 SMARCA4P51532 1647 aa28■■■□□ 2.07
YIPF3-212ENST00000503972 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
YIPF3-212ENST00000503972 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
YIPF3-212ENST00000503972 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
YIPF3-212ENST00000503972 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
YIPF3-212ENST00000503972 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
YIPF3-212ENST00000503972 WIZO95785 1651 aa27.71■■■□□ 2.03
YIPF3-212ENST00000503972 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
YIPF3-212ENST00000503972 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
YIPF3-212ENST00000503972 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
YIPF3-212ENST00000503972 NCAPD3P42695 1498 aa27.56■■■□□ 2
YIPF3-212ENST00000503972 DNAJC5BQ9UF47 199 aa27.49■■□□□ 1.99
YIPF3-212ENST00000503972 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
YIPF3-212ENST00000503972 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
YIPF3-212ENST00000503972 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
YIPF3-212ENST00000503972 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
YIPF3-212ENST00000503972 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
YIPF3-212ENST00000503972 CFTRP13569 1480 aa26.78■■□□□ 1.88
YIPF3-212ENST00000503972 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
YIPF3-212ENST00000503972 NESP48681 1621 aa26.69■■□□□ 1.86
YIPF3-212ENST00000503972 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
YIPF3-212ENST00000503972 PDS5BQ9NTI5 1447 aa26.51■■□□□ 1.83
YIPF3-212ENST00000503972 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
YIPF3-212ENST00000503972 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
YIPF3-212ENST00000503972 KIF21AQ7Z4S6 1674 aa26.37■■□□□ 1.81
YIPF3-212ENST00000503972 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
YIPF3-212ENST00000503972 ERCC6Q03468 1493 aa26.31■■□□□ 1.8
YIPF3-212ENST00000503972 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
YIPF3-212ENST00000503972 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
YIPF3-212ENST00000503972 CUX1P39880 1505 aa26.2■■□□□ 1.79
YIPF3-212ENST00000503972 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
YIPF3-212ENST00000503972 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
YIPF3-212ENST00000503972 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
YIPF3-212ENST00000503972 TRIM41Q8WV44 630 aa26.16■■□□□ 1.78
YIPF3-212ENST00000503972 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
YIPF3-212ENST00000503972 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
YIPF3-212ENST00000503972 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
YIPF3-212ENST00000503972 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.78
YIPF3-212ENST00000503972 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
YIPF3-212ENST00000503972 WDR62O43379 1518 aa26.09■■□□□ 1.77
YIPF3-212ENST00000503972 FGD5Q6ZNL6 1462 aa26.01■■□□□ 1.75
YIPF3-212ENST00000503972 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
YIPF3-212ENST00000503972 SOGA1O94964 1423 aa25.88■■□□□ 1.73
YIPF3-212ENST00000503972 CUX2O14529 1486 aa25.86■■□□□ 1.73
YIPF3-212ENST00000503972 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
YIPF3-212ENST00000503972 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
YIPF3-212ENST00000503972 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
YIPF3-212ENST00000503972 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
YIPF3-212ENST00000503972 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
YIPF3-212ENST00000503972 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
YIPF3-212ENST00000503972 KIF27Q86VH2 1401 aa25.69■■□□□ 1.7
YIPF3-212ENST00000503972 EEA1Q15075 1411 aa25.66■■□□□ 1.7
YIPF3-212ENST00000503972 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
YIPF3-212ENST00000503972 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
YIPF3-212ENST00000503972 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
YIPF3-212ENST00000503972 ABCA5Q8WWZ7 1642 aa25.61■■□□□ 1.69
YIPF3-212ENST00000503972 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.692e-8■■■□□ 18.4
YIPF3-212ENST00000503972 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
YIPF3-212ENST00000503972 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
YIPF3-212ENST00000503972 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
YIPF3-212ENST00000503972 IGF1RP08069 1367 aa25.51■■□□□ 1.67
YIPF3-212ENST00000503972 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
YIPF3-212ENST00000503972 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
YIPF3-212ENST00000503972 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
YIPF3-212ENST00000503972 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
YIPF3-212ENST00000503972 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
YIPF3-212ENST00000503972 CUL7Q14999 1698 aa25.37■■□□□ 1.65
YIPF3-212ENST00000503972 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
YIPF3-212ENST00000503972 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
YIPF3-212ENST00000503972 KIF21BO75037 1637 aa25.33■■□□□ 1.65
YIPF3-212ENST00000503972 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
YIPF3-212ENST00000503972 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
YIPF3-212ENST00000503972 RAPGEF2Q9Y4G8 1499 aa25.29■■□□□ 1.64
YIPF3-212ENST00000503972 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
YIPF3-212ENST00000503972 LOC105371045A0A1W2PR82 267 aa25.24■■□□□ 1.63
YIPF3-212ENST00000503972 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
YIPF3-212ENST00000503972 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
YIPF3-212ENST00000503972 CHMP7Q8WUX9 453 aaPredicted RBP25.18■■□□□ 1.62
YIPF3-212ENST00000503972 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
YIPF3-212ENST00000503972 FBLN2P98095 1184 aa25.14■■□□□ 1.62
YIPF3-212ENST00000503972 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
YIPF3-212ENST00000503972 CHD1O14646 1710 aa25.08■■□□□ 1.61
YIPF3-212ENST00000503972 TNIKQ9UKE5 1360 aa25.07■■□□□ 1.6
YIPF3-212ENST00000503972 NUP160Q12769 1436 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms