RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 AEBP2Q6ZN18 517 aaPredicted RBP26.78■■□□□ 1.88
HMGCR-204ENST00000504466 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
HMGCR-204ENST00000504466 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
HMGCR-204ENST00000504466 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
HMGCR-204ENST00000504466 FOXD1Q16676 465 aa21.24■□□□□ 0.99
HMGCR-204ENST00000504466 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
HMGCR-204ENST00000504466 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
HMGCR-204ENST00000504466 ADRA2BP18089 450 aa19.87■□□□□ 0.77
HMGCR-204ENST00000504466 MSH5O43196 834 aa19.83■□□□□ 0.77
HMGCR-204ENST00000504466 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
HMGCR-204ENST00000504466 POTEDQ86YR6 584 aa19.09■□□□□ 0.65
HMGCR-204ENST00000504466 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
HMGCR-204ENST00000504466 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
HMGCR-204ENST00000504466 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
HMGCR-204ENST00000504466 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
HMGCR-204ENST00000504466 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
HMGCR-204ENST00000504466 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
HMGCR-204ENST00000504466 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
HMGCR-204ENST00000504466 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
HMGCR-204ENST00000504466 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
HMGCR-204ENST00000504466 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
HMGCR-204ENST00000504466 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
HMGCR-204ENST00000504466 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
HMGCR-204ENST00000504466 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
HMGCR-204ENST00000504466 KCNA4P22459 653 aa16.84■□□□□ 0.29
HMGCR-204ENST00000504466 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
HMGCR-204ENST00000504466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
HMGCR-204ENST00000504466 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
HMGCR-204ENST00000504466 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
HMGCR-204ENST00000504466 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
HMGCR-204ENST00000504466 CAPN15O75808 1086 aa15.94■□□□□ 0.14
HMGCR-204ENST00000504466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
HMGCR-204ENST00000504466 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
HMGCR-204ENST00000504466 DSG3P32926 999 aa15.91■□□□□ 0.14
HMGCR-204ENST00000504466 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
HMGCR-204ENST00000504466 APLP2Q06481 763 aa15.88■□□□□ 0.13
HMGCR-204ENST00000504466 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
HMGCR-204ENST00000504466 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
HMGCR-204ENST00000504466 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
HMGCR-204ENST00000504466 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
HMGCR-204ENST00000504466 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
HMGCR-204ENST00000504466 ABCB7O75027 752 aa15.57■□□□□ 0.08
HMGCR-204ENST00000504466 ZBTB22O15209 634 aa15.52■□□□□ 0.08
HMGCR-204ENST00000504466 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
HMGCR-204ENST00000504466 POLA2Q14181 598 aa15.37■□□□□ 0.05
HMGCR-204ENST00000504466 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
HMGCR-204ENST00000504466 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
HMGCR-204ENST00000504466 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
HMGCR-204ENST00000504466 POTEHQ6S545 545 aa14.98□□□□□ -0.01
HMGCR-204ENST00000504466 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
HMGCR-204ENST00000504466 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
HMGCR-204ENST00000504466 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
HMGCR-204ENST00000504466 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
HMGCR-204ENST00000504466 FBLN2P98095 1184 aa14.75□□□□□ -0.05
HMGCR-204ENST00000504466 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
HMGCR-204ENST00000504466 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
HMGCR-204ENST00000504466 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
HMGCR-204ENST00000504466 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
HMGCR-204ENST00000504466 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
HMGCR-204ENST00000504466 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
HMGCR-204ENST00000504466 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
HMGCR-204ENST00000504466 SSUH2Q9Y2M2 353 aa14.52□□□□□ -0.09
HMGCR-204ENST00000504466 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
HMGCR-204ENST00000504466 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
HMGCR-204ENST00000504466 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
HMGCR-204ENST00000504466 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
HMGCR-204ENST00000504466 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGCR-204ENST00000504466 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
HMGCR-204ENST00000504466 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
HMGCR-204ENST00000504466 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
HMGCR-204ENST00000504466 HAX1O00165 279 aa14.09□□□□□ -0.15
HMGCR-204ENST00000504466 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
HMGCR-204ENST00000504466 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
HMGCR-204ENST00000504466 EVX2Q03828 476 aa13.98□□□□□ -0.17
HMGCR-204ENST00000504466 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
HMGCR-204ENST00000504466 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
HMGCR-204ENST00000504466 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
HMGCR-204ENST00000504466 PROM2Q8N271 834 aa13.86□□□□□ -0.19
HMGCR-204ENST00000504466 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
HMGCR-204ENST00000504466 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
HMGCR-204ENST00000504466 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
HMGCR-204ENST00000504466 GABBR2O75899 941 aa13.67□□□□□ -0.22
HMGCR-204ENST00000504466 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
HMGCR-204ENST00000504466 CLCN6P51797 869 aa13.59□□□□□ -0.23
HMGCR-204ENST00000504466 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
HMGCR-204ENST00000504466 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGCR-204ENST00000504466 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
HMGCR-204ENST00000504466 FKBP8Q14318 412 aa13.46□□□□□ -0.25
HMGCR-204ENST00000504466 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
HMGCR-204ENST00000504466 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
HMGCR-204ENST00000504466 MIER1Q8N108 512 aa13.35□□□□□ -0.27
HMGCR-204ENST00000504466 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
HMGCR-204ENST00000504466 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
HMGCR-204ENST00000504466 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
HMGCR-204ENST00000504466 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
HMGCR-204ENST00000504466 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
HMGCR-204ENST00000504466 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
HMGCR-204ENST00000504466 LHX8Q68G74 356 aa13.23□□□□□ -0.29
HMGCR-204ENST00000504466 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
HMGCR-204ENST00000504466 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms